Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03505

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03495 and A4249_RS03500 are separated by 2 nucleotidesA4249_RS03500 and A4249_RS03505 overlap by 1 nucleotidesA4249_RS03505 and A4249_RS03510 overlap by 4 nucleotides A4249_RS03495: A4249_RS03495 - type 1 glutamine amidotransferase domain-containing protein, at 728,329 to 729,138 _RS03495 A4249_RS03500: A4249_RS03500 - VOC family protein, at 729,141 to 729,596 _RS03500 A4249_RS03505: A4249_RS03505 - NADH:flavin oxidoreductase/NADH oxidase, at 729,596 to 730,702 _RS03505 A4249_RS03510: A4249_RS03510 - L-dopachrome tautomerase-related protein, at 730,699 to 731,850 _RS03510 Position (kb) 729 730 731Strain fitness (log2 ratio) -2 -1 0 1at 728.656 kb on + strand, within A4249_RS03495at 728.656 kb on + strand, within A4249_RS03495at 728.656 kb on + strand, within A4249_RS03495at 728.661 kb on + strand, within A4249_RS03495at 728.688 kb on + strand, within A4249_RS03495at 728.689 kb on - strand, within A4249_RS03495at 728.702 kb on + strand, within A4249_RS03495at 728.703 kb on - strand, within A4249_RS03495at 728.703 kb on - strand, within A4249_RS03495at 728.729 kb on - strand, within A4249_RS03495at 728.774 kb on - strand, within A4249_RS03495at 729.147 kb on + strandat 729.147 kb on + strandat 729.147 kb on + strandat 729.147 kb on + strandat 729.252 kb on + strand, within A4249_RS03500at 729.253 kb on - strand, within A4249_RS03500at 729.264 kb on + strand, within A4249_RS03500at 729.264 kb on + strand, within A4249_RS03500at 729.264 kb on + strand, within A4249_RS03500at 729.264 kb on + strand, within A4249_RS03500at 729.264 kb on + strand, within A4249_RS03500at 729.264 kb on + strand, within A4249_RS03500at 729.265 kb on - strand, within A4249_RS03500at 729.265 kb on - strand, within A4249_RS03500at 729.265 kb on - strand, within A4249_RS03500at 729.265 kb on - strand, within A4249_RS03500at 729.265 kb on - strand, within A4249_RS03500at 729.265 kb on - strand, within A4249_RS03500at 729.265 kb on - strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.330 kb on + strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.331 kb on - strand, within A4249_RS03500at 729.370 kb on - strand, within A4249_RS03500at 729.420 kb on + strand, within A4249_RS03500at 729.420 kb on + strand, within A4249_RS03500at 729.420 kb on + strand, within A4249_RS03500at 729.420 kb on + strand, within A4249_RS03500at 729.420 kb on + strand, within A4249_RS03500at 729.420 kb on + strand, within A4249_RS03500at 729.421 kb on - strand, within A4249_RS03500at 729.421 kb on - strand, within A4249_RS03500at 729.421 kb on - strand, within A4249_RS03500at 729.421 kb on - strand, within A4249_RS03500at 729.421 kb on - strand, within A4249_RS03500at 729.421 kb on - strand, within A4249_RS03500at 729.421 kb on - strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.483 kb on + strand, within A4249_RS03500at 729.484 kb on - strand, within A4249_RS03500at 729.484 kb on - strand, within A4249_RS03500at 729.484 kb on - strand, within A4249_RS03500at 729.484 kb on - strand, within A4249_RS03500at 729.484 kb on - strand, within A4249_RS03500at 729.484 kb on - strand, within A4249_RS03500at 729.484 kb on - strand, within A4249_RS03500at 729.674 kb on + strandat 729.674 kb on + strandat 729.674 kb on + strandat 729.674 kb on + strandat 729.674 kb on + strandat 729.675 kb on - strandat 729.675 kb on - strandat 729.675 kb on - strandat 729.759 kb on + strand, within A4249_RS03505at 729.759 kb on + strand, within A4249_RS03505at 729.759 kb on + strand, within A4249_RS03505at 729.759 kb on + strand, within A4249_RS03505at 729.760 kb on - strand, within A4249_RS03505at 729.760 kb on - strand, within A4249_RS03505at 729.797 kb on + strand, within A4249_RS03505at 729.798 kb on - strand, within A4249_RS03505at 729.798 kb on - strand, within A4249_RS03505at 729.798 kb on - strand, within A4249_RS03505at 729.798 kb on - strand, within A4249_RS03505at 729.815 kb on + strand, within A4249_RS03505at 729.815 kb on + strand, within A4249_RS03505at 729.816 kb on - strand, within A4249_RS03505at 729.816 kb on - strand, within A4249_RS03505at 730.142 kb on + strand, within A4249_RS03505at 730.142 kb on + strand, within A4249_RS03505at 730.142 kb on + strand, within A4249_RS03505at 730.142 kb on + strand, within A4249_RS03505at 730.142 kb on + strand, within A4249_RS03505at 730.142 kb on + strand, within A4249_RS03505at 730.143 kb on - strand, within A4249_RS03505at 730.143 kb on - strand, within A4249_RS03505at 730.143 kb on - strand, within A4249_RS03505at 730.194 kb on - strand, within A4249_RS03505at 730.436 kb on + strand, within A4249_RS03505at 730.437 kb on - strand, within A4249_RS03505at 730.646 kb on + strandat 730.646 kb on + strandat 730.646 kb on + strandat 730.646 kb on + strandat 730.646 kb on + strandat 730.646 kb on + strandat 730.646 kb on + strandat 730.647 kb on - strandat 730.647 kb on - strandat 730.647 kb on - strandat 730.647 kb on - strandat 730.647 kb on - strandat 730.937 kb on - strand, within A4249_RS03510at 731.167 kb on + strand, within A4249_RS03510at 731.167 kb on + strand, within A4249_RS03510at 731.167 kb on + strand, within A4249_RS03510at 731.167 kb on + strand, within A4249_RS03510at 731.168 kb on - strand, within A4249_RS03510at 731.168 kb on - strand, within A4249_RS03510at 731.168 kb on - strand, within A4249_RS03510at 731.168 kb on - strand, within A4249_RS03510at 731.168 kb on - strand, within A4249_RS03510at 731.168 kb on - strand, within A4249_RS03510at 731.168 kb on - strand, within A4249_RS03510at 731.218 kb on + strand, within A4249_RS03510at 731.218 kb on + strand, within A4249_RS03510at 731.218 kb on + strand, within A4249_RS03510at 731.219 kb on - strand, within A4249_RS03510at 731.219 kb on - strand, within A4249_RS03510at 731.219 kb on - strand, within A4249_RS03510at 731.219 kb on - strand, within A4249_RS03510at 731.219 kb on - strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.446 kb on + strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.447 kb on - strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.449 kb on + strand, within A4249_RS03510at 731.450 kb on - strand, within A4249_RS03510at 731.614 kb on + strand, within A4249_RS03510

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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728,656 + A4249_RS03495 0.40 -0.6
728,656 + A4249_RS03495 0.40 -0.6
728,656 + A4249_RS03495 0.40 -1.4
728,661 + A4249_RS03495 0.41 +0.3
728,688 + A4249_RS03495 0.44 +0.3
728,689 - A4249_RS03495 0.44 -0.4
728,702 + A4249_RS03495 0.46 +0.4
728,703 - A4249_RS03495 0.46 +0.9
728,703 - A4249_RS03495 0.46 -1.1
728,729 - A4249_RS03495 0.49 -1.0
728,774 - A4249_RS03495 0.55 +1.2
729,147 + +0.4
729,147 + +0.2
729,147 + -0.4
729,147 + -0.7
729,252 + A4249_RS03500 0.24 -1.0
729,253 - A4249_RS03500 0.25 +0.7
729,264 + A4249_RS03500 0.27 -0.4
729,264 + A4249_RS03500 0.27 +0.6
729,264 + A4249_RS03500 0.27 -0.2
729,264 + A4249_RS03500 0.27 -0.2
729,264 + A4249_RS03500 0.27 -1.8
729,264 + A4249_RS03500 0.27 -0.5
729,265 - A4249_RS03500 0.27 +1.1
729,265 - A4249_RS03500 0.27 +1.3
729,265 - A4249_RS03500 0.27 -0.2
729,265 - A4249_RS03500 0.27 -0.6
729,265 - A4249_RS03500 0.27 -0.3
729,265 - A4249_RS03500 0.27 +0.7
729,265 - A4249_RS03500 0.27 -0.7
729,330 + A4249_RS03500 0.41 -1.3
729,330 + A4249_RS03500 0.41 +0.3
729,330 + A4249_RS03500 0.41 +1.2
729,330 + A4249_RS03500 0.41 -0.4
729,330 + A4249_RS03500 0.41 -0.2
729,330 + A4249_RS03500 0.41 +0.1
729,330 + A4249_RS03500 0.41 -0.6
729,330 + A4249_RS03500 0.41 -0.4
729,331 - A4249_RS03500 0.42 -0.7
729,331 - A4249_RS03500 0.42 +0.6
729,331 - A4249_RS03500 0.42 +1.0
729,331 - A4249_RS03500 0.42 -0.7
729,331 - A4249_RS03500 0.42 +0.9
729,331 - A4249_RS03500 0.42 +0.2
729,331 - A4249_RS03500 0.42 +0.2
729,331 - A4249_RS03500 0.42 -0.1
729,331 - A4249_RS03500 0.42 -0.6
729,370 - A4249_RS03500 0.50 +0.4
729,420 + A4249_RS03500 0.61 +0.5
729,420 + A4249_RS03500 0.61 +1.0
729,420 + A4249_RS03500 0.61 -0.5
729,420 + A4249_RS03500 0.61 -0.4
729,420 + A4249_RS03500 0.61 -0.7
729,420 + A4249_RS03500 0.61 -0.2
729,421 - A4249_RS03500 0.61 -0.5
729,421 - A4249_RS03500 0.61 +0.1
729,421 - A4249_RS03500 0.61 -0.3
729,421 - A4249_RS03500 0.61 -0.3
729,421 - A4249_RS03500 0.61 -0.8
729,421 - A4249_RS03500 0.61 -1.8
729,421 - A4249_RS03500 0.61 -1.8
729,483 + A4249_RS03500 0.75 +1.4
729,483 + A4249_RS03500 0.75 -0.1
729,483 + A4249_RS03500 0.75 +0.4
729,483 + A4249_RS03500 0.75 -0.8
729,483 + A4249_RS03500 0.75 -0.4
729,483 + A4249_RS03500 0.75 +0.6
729,483 + A4249_RS03500 0.75 +0.6
729,483 + A4249_RS03500 0.75 -0.2
729,483 + A4249_RS03500 0.75 -0.7
729,483 + A4249_RS03500 0.75 -2.1
729,484 - A4249_RS03500 0.75 +0.6
729,484 - A4249_RS03500 0.75 -0.5
729,484 - A4249_RS03500 0.75 +0.0
729,484 - A4249_RS03500 0.75 -0.2
729,484 - A4249_RS03500 0.75 +0.4
729,484 - A4249_RS03500 0.75 -0.3
729,484 - A4249_RS03500 0.75 +0.0
729,674 + +0.9
729,674 + -1.9
729,674 + +0.8
729,674 + +0.4
729,674 + -0.8
729,675 - +1.3
729,675 - -1.7
729,675 - +0.7
729,759 + A4249_RS03505 0.15 +0.1
729,759 + A4249_RS03505 0.15 +0.4
729,759 + A4249_RS03505 0.15 +0.7
729,759 + A4249_RS03505 0.15 +0.1
729,760 - A4249_RS03505 0.15 -0.5
729,760 - A4249_RS03505 0.15 -0.7
729,797 + A4249_RS03505 0.18 +1.1
729,798 - A4249_RS03505 0.18 +0.9
729,798 - A4249_RS03505 0.18 -0.1
729,798 - A4249_RS03505 0.18 -1.6
729,798 - A4249_RS03505 0.18 +0.2
729,815 + A4249_RS03505 0.20 -0.5
729,815 + A4249_RS03505 0.20 +0.8
729,816 - A4249_RS03505 0.20 +0.5
729,816 - A4249_RS03505 0.20 -0.2
730,142 + A4249_RS03505 0.49 +0.9
730,142 + A4249_RS03505 0.49 -1.2
730,142 + A4249_RS03505 0.49 -0.1
730,142 + A4249_RS03505 0.49 -1.4
730,142 + A4249_RS03505 0.49 -0.1
730,142 + A4249_RS03505 0.49 -0.5
730,143 - A4249_RS03505 0.49 +0.6
730,143 - A4249_RS03505 0.49 -0.2
730,143 - A4249_RS03505 0.49 +0.3
730,194 - A4249_RS03505 0.54 -0.6
730,436 + A4249_RS03505 0.76 -0.5
730,437 - A4249_RS03505 0.76 -0.5
730,646 + -0.9
730,646 + +0.4
730,646 + -0.5
730,646 + -0.2
730,646 + -1.2
730,646 + +0.5
730,646 + +1.5
730,647 - -0.2
730,647 - -0.2
730,647 - -0.4
730,647 - -0.7
730,647 - +0.7
730,937 - A4249_RS03510 0.21 +0.9
731,167 + A4249_RS03510 0.41 -0.7
731,167 + A4249_RS03510 0.41 -0.1
731,167 + A4249_RS03510 0.41 -0.4
731,167 + A4249_RS03510 0.41 -0.1
731,168 - A4249_RS03510 0.41 +0.2
731,168 - A4249_RS03510 0.41 -1.6
731,168 - A4249_RS03510 0.41 -2.1
731,168 - A4249_RS03510 0.41 -0.6
731,168 - A4249_RS03510 0.41 -0.6
731,168 - A4249_RS03510 0.41 -0.6
731,168 - A4249_RS03510 0.41 +0.5
731,218 + A4249_RS03510 0.45 -1.0
731,218 + A4249_RS03510 0.45 +0.8
731,218 + A4249_RS03510 0.45 +0.7
731,219 - A4249_RS03510 0.45 +0.1
731,219 - A4249_RS03510 0.45 -0.3
731,219 - A4249_RS03510 0.45 -0.3
731,219 - A4249_RS03510 0.45 -0.1
731,219 - A4249_RS03510 0.45 -0.1
731,446 + A4249_RS03510 0.65 -1.1
731,446 + A4249_RS03510 0.65 -0.3
731,446 + A4249_RS03510 0.65 -0.8
731,446 + A4249_RS03510 0.65 +0.7
731,446 + A4249_RS03510 0.65 +0.0
731,446 + A4249_RS03510 0.65 +0.6
731,446 + A4249_RS03510 0.65 +1.0
731,446 + A4249_RS03510 0.65 -0.1
731,446 + A4249_RS03510 0.65 +1.2
731,447 - A4249_RS03510 0.65 -0.8
731,447 - A4249_RS03510 0.65 -0.2
731,447 - A4249_RS03510 0.65 -0.5
731,447 - A4249_RS03510 0.65 -0.4
731,447 - A4249_RS03510 0.65 -0.4
731,447 - A4249_RS03510 0.65 -0.4
731,447 - A4249_RS03510 0.65 +0.6
731,447 - A4249_RS03510 0.65 -0.4
731,447 - A4249_RS03510 0.65 +0.4
731,447 - A4249_RS03510 0.65 +0.8
731,449 + A4249_RS03510 0.65 +1.2
731,449 + A4249_RS03510 0.65 -0.4
731,449 + A4249_RS03510 0.65 -1.4
731,449 + A4249_RS03510 0.65 +0.9
731,449 + A4249_RS03510 0.65 +0.7
731,449 + A4249_RS03510 0.65 -0.7
731,449 + A4249_RS03510 0.65 +0.3
731,449 + A4249_RS03510 0.65 -0.7
731,450 - A4249_RS03510 0.65 +0.8
731,614 + A4249_RS03510 0.79 +0.5

Or see this region's nucleotide sequence