Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02690 and A4249_RS02695 overlap by 26 nucleotides A4249_RS02695 and A4249_RS02700 are separated by 68 nucleotides A4249_RS02700 and A4249_RS17070 are separated by 143 nucleotides
A4249_RS02690: A4249_RS02690 - CCA tRNA nucleotidyltransferase, at 573,522 to 574,736
_RS02690
A4249_RS02695: A4249_RS02695 - endonuclease/exonuclease/phosphatase family protein, at 574,711 to 575,667
_RS02695
A4249_RS02700: A4249_RS02700 - DUF4112 domain-containing protein, at 575,736 to 576,197
_RS02700
A4249_RS17070: A4249_RS17070 - DUF2793 domain-containing protein, at 576,341 to 577,777
_RS17070
Position (kb) 574
575
576 Strain fitness (log2 ratio) -2
-1
0
1
2 at 574.817 kb on + strand, within A4249_RS02695 at 574.817 kb on + strand, within A4249_RS02695 at 574.818 kb on - strand, within A4249_RS02695 at 574.818 kb on - strand, within A4249_RS02695 at 574.944 kb on + strand, within A4249_RS02695 at 574.945 kb on - strand, within A4249_RS02695 at 574.945 kb on - strand, within A4249_RS02695 at 574.945 kb on - strand, within A4249_RS02695 at 575.036 kb on + strand, within A4249_RS02695 at 575.037 kb on - strand, within A4249_RS02695 at 575.037 kb on - strand, within A4249_RS02695 at 575.042 kb on + strand, within A4249_RS02695 at 575.043 kb on - strand, within A4249_RS02695 at 575.231 kb on + strand, within A4249_RS02695 at 575.232 kb on - strand, within A4249_RS02695 at 575.232 kb on - strand, within A4249_RS02695 at 575.232 kb on - strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.354 kb on + strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.355 kb on - strand, within A4249_RS02695 at 575.369 kb on + strand, within A4249_RS02695 at 575.369 kb on + strand, within A4249_RS02695 at 575.369 kb on + strand, within A4249_RS02695 at 575.370 kb on - strand, within A4249_RS02695 at 575.370 kb on - strand, within A4249_RS02695 at 575.485 kb on + strand, within A4249_RS02695 at 575.486 kb on - strand, within A4249_RS02695 at 575.656 kb on + strand at 575.656 kb on + strand at 575.657 kb on - strand at 575.657 kb on - strand at 575.657 kb on - strand at 575.676 kb on + strand at 575.676 kb on + strand at 575.676 kb on + strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.677 kb on - strand at 575.883 kb on + strand, within A4249_RS02700 at 575.883 kb on + strand, within A4249_RS02700 at 575.884 kb on - strand, within A4249_RS02700 at 575.884 kb on - strand, within A4249_RS02700 at 575.884 kb on - strand, within A4249_RS02700 at 575.885 kb on + strand, within A4249_RS02700 at 575.885 kb on + strand, within A4249_RS02700 at 575.885 kb on + strand, within A4249_RS02700 at 575.885 kb on + strand, within A4249_RS02700 at 575.885 kb on + strand, within A4249_RS02700 at 575.886 kb on - strand, within A4249_RS02700 at 575.886 kb on - strand, within A4249_RS02700 at 575.886 kb on - strand, within A4249_RS02700 at 575.886 kb on - strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.967 kb on + strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.968 kb on - strand, within A4249_RS02700 at 575.969 kb on + strand, within A4249_RS02700 at 575.969 kb on + strand, within A4249_RS02700 at 575.969 kb on + strand, within A4249_RS02700 at 575.969 kb on + strand, within A4249_RS02700 at 575.969 kb on + strand, within A4249_RS02700 at 575.969 kb on + strand, within A4249_RS02700 at 575.970 kb on - strand, within A4249_RS02700 at 575.970 kb on - strand, within A4249_RS02700 at 575.970 kb on - strand, within A4249_RS02700 at 575.970 kb on - strand, within A4249_RS02700 at 576.183 kb on + strand at 576.183 kb on + strand at 576.183 kb on + strand at 576.183 kb on + strand at 576.183 kb on + strand at 576.184 kb on - strand at 576.184 kb on - strand at 576.184 kb on - strand at 576.219 kb on + strand at 576.219 kb on + strand at 576.219 kb on + strand at 576.220 kb on - strand at 576.220 kb on - strand at 576.377 kb on + strand at 576.418 kb on + strand at 576.418 kb on + strand at 576.418 kb on + strand at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.512 kb on + strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.513 kb on - strand, within A4249_RS17070 at 576.514 kb on + strand, within A4249_RS17070 at 576.514 kb on + strand, within A4249_RS17070 at 576.514 kb on + strand, within A4249_RS17070 at 576.515 kb on - strand, within A4249_RS17070 at 576.515 kb on - strand, within A4249_RS17070 at 576.515 kb on - strand, within A4249_RS17070
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 574,817 + A4249_RS02695 0.11 +0.3 574,817 + A4249_RS02695 0.11 +0.2 574,818 - A4249_RS02695 0.11 +0.1 574,818 - A4249_RS02695 0.11 +1.2 574,944 + A4249_RS02695 0.24 +0.1 574,945 - A4249_RS02695 0.24 -0.3 574,945 - A4249_RS02695 0.24 +1.3 574,945 - A4249_RS02695 0.24 -1.0 575,036 + A4249_RS02695 0.34 -0.4 575,037 - A4249_RS02695 0.34 +2.3 575,037 - A4249_RS02695 0.34 +0.9 575,042 + A4249_RS02695 0.35 -0.9 575,043 - A4249_RS02695 0.35 -0.7 575,231 + A4249_RS02695 0.54 +0.3 575,232 - A4249_RS02695 0.54 -0.0 575,232 - A4249_RS02695 0.54 +0.8 575,232 - A4249_RS02695 0.54 +0.1 575,354 + A4249_RS02695 0.67 -0.2 575,354 + A4249_RS02695 0.67 -0.5 575,354 + A4249_RS02695 0.67 -0.4 575,354 + A4249_RS02695 0.67 +0.7 575,354 + A4249_RS02695 0.67 -0.5 575,354 + A4249_RS02695 0.67 -0.7 575,354 + A4249_RS02695 0.67 +0.8 575,354 + A4249_RS02695 0.67 +0.3 575,354 + A4249_RS02695 0.67 +0.0 575,354 + A4249_RS02695 0.67 +0.4 575,354 + A4249_RS02695 0.67 +0.6 575,355 - A4249_RS02695 0.67 +0.3 575,355 - A4249_RS02695 0.67 -0.8 575,355 - A4249_RS02695 0.67 +0.9 575,355 - A4249_RS02695 0.67 -0.4 575,355 - A4249_RS02695 0.67 +0.2 575,355 - A4249_RS02695 0.67 +0.4 575,355 - A4249_RS02695 0.67 -0.3 575,355 - A4249_RS02695 0.67 -1.7 575,355 - A4249_RS02695 0.67 -0.4 575,355 - A4249_RS02695 0.67 +0.3 575,355 - A4249_RS02695 0.67 -0.1 575,355 - A4249_RS02695 0.67 -0.8 575,355 - A4249_RS02695 0.67 -0.3 575,369 + A4249_RS02695 0.69 +0.3 575,369 + A4249_RS02695 0.69 +0.6 575,369 + A4249_RS02695 0.69 -0.6 575,370 - A4249_RS02695 0.69 +0.5 575,370 - A4249_RS02695 0.69 +0.1 575,485 + A4249_RS02695 0.81 +0.3 575,486 - A4249_RS02695 0.81 +0.1 575,656 + -0.3 575,656 + +0.0 575,657 - -1.2 575,657 - +1.0 575,657 - +1.6 575,676 + -0.3 575,676 + -1.0 575,676 + -0.2 575,677 - +0.0 575,677 - -2.2 575,677 - -0.6 575,677 - +0.9 575,677 - +0.8 575,677 - +0.7 575,677 - -1.1 575,677 - -1.3 575,677 - -0.9 575,677 - +0.8 575,677 - +0.6 575,677 - +0.1 575,677 - -0.2 575,677 - -0.9 575,883 + A4249_RS02700 0.32 +0.1 575,883 + A4249_RS02700 0.32 -0.3 575,884 - A4249_RS02700 0.32 +0.0 575,884 - A4249_RS02700 0.32 -0.3 575,884 - A4249_RS02700 0.32 -0.3 575,885 + A4249_RS02700 0.32 -0.4 575,885 + A4249_RS02700 0.32 -0.3 575,885 + A4249_RS02700 0.32 +0.1 575,885 + A4249_RS02700 0.32 -0.5 575,885 + A4249_RS02700 0.32 -0.1 575,886 - A4249_RS02700 0.32 +0.1 575,886 - A4249_RS02700 0.32 -0.6 575,886 - A4249_RS02700 0.32 -0.2 575,886 - A4249_RS02700 0.32 -0.1 575,967 + A4249_RS02700 0.50 -0.3 575,967 + A4249_RS02700 0.50 -0.2 575,967 + A4249_RS02700 0.50 +0.2 575,967 + A4249_RS02700 0.50 +0.0 575,967 + A4249_RS02700 0.50 -2.0 575,967 + A4249_RS02700 0.50 -0.9 575,967 + A4249_RS02700 0.50 -0.9 575,967 + A4249_RS02700 0.50 -0.1 575,967 + A4249_RS02700 0.50 -0.6 575,967 + A4249_RS02700 0.50 -0.3 575,967 + A4249_RS02700 0.50 -0.5 575,967 + A4249_RS02700 0.50 -0.3 575,967 + A4249_RS02700 0.50 +0.0 575,967 + A4249_RS02700 0.50 -0.8 575,967 + A4249_RS02700 0.50 -0.6 575,967 + A4249_RS02700 0.50 -0.4 575,967 + A4249_RS02700 0.50 +0.1 575,967 + A4249_RS02700 0.50 -0.2 575,968 - A4249_RS02700 0.50 -0.9 575,968 - A4249_RS02700 0.50 -0.2 575,968 - A4249_RS02700 0.50 -0.3 575,968 - A4249_RS02700 0.50 -0.3 575,968 - A4249_RS02700 0.50 +0.0 575,968 - A4249_RS02700 0.50 -1.0 575,968 - A4249_RS02700 0.50 -0.4 575,968 - A4249_RS02700 0.50 -0.1 575,968 - A4249_RS02700 0.50 +0.1 575,968 - A4249_RS02700 0.50 -0.1 575,968 - A4249_RS02700 0.50 -0.0 575,968 - A4249_RS02700 0.50 -0.0 575,968 - A4249_RS02700 0.50 -0.3 575,969 + A4249_RS02700 0.50 -0.4 575,969 + A4249_RS02700 0.50 -0.0 575,969 + A4249_RS02700 0.50 -0.6 575,969 + A4249_RS02700 0.50 -0.4 575,969 + A4249_RS02700 0.50 -0.6 575,969 + A4249_RS02700 0.50 -0.4 575,970 - A4249_RS02700 0.51 -0.9 575,970 - A4249_RS02700 0.51 -0.1 575,970 - A4249_RS02700 0.51 -0.1 575,970 - A4249_RS02700 0.51 +0.2 576,183 + -0.4 576,183 + -0.5 576,183 + -0.5 576,183 + +0.2 576,183 + -0.2 576,184 - -1.1 576,184 - -0.0 576,184 - +0.1 576,219 + +0.7 576,219 + -0.0 576,219 + -0.2 576,220 - -0.4 576,220 - +0.2 576,377 + -0.6 576,418 + -0.2 576,418 + -0.6 576,418 + +0.3 576,512 + A4249_RS17070 0.12 +0.1 576,512 + A4249_RS17070 0.12 -1.5 576,512 + A4249_RS17070 0.12 -0.8 576,512 + A4249_RS17070 0.12 +0.2 576,512 + A4249_RS17070 0.12 +1.2 576,512 + A4249_RS17070 0.12 -0.2 576,512 + A4249_RS17070 0.12 +0.7 576,512 + A4249_RS17070 0.12 -0.3 576,512 + A4249_RS17070 0.12 +0.0 576,512 + A4249_RS17070 0.12 -0.1 576,512 + A4249_RS17070 0.12 -0.0 576,512 + A4249_RS17070 0.12 +0.0 576,513 - A4249_RS17070 0.12 +0.0 576,513 - A4249_RS17070 0.12 -1.1 576,513 - A4249_RS17070 0.12 +0.2 576,513 - A4249_RS17070 0.12 -0.3 576,513 - A4249_RS17070 0.12 -0.5 576,513 - A4249_RS17070 0.12 +0.0 576,513 - A4249_RS17070 0.12 -1.5 576,513 - A4249_RS17070 0.12 -0.3 576,513 - A4249_RS17070 0.12 -0.3 576,513 - A4249_RS17070 0.12 +0.6 576,513 - A4249_RS17070 0.12 -0.5 576,513 - A4249_RS17070 0.12 +1.0 576,513 - A4249_RS17070 0.12 -1.2 576,513 - A4249_RS17070 0.12 -0.2 576,513 - A4249_RS17070 0.12 -0.7 576,514 + A4249_RS17070 0.12 +0.4 576,514 + A4249_RS17070 0.12 -1.4 576,514 + A4249_RS17070 0.12 +0.1 576,515 - A4249_RS17070 0.12 -0.2 576,515 - A4249_RS17070 0.12 +0.7 576,515 - A4249_RS17070 0.12 -0.1
Or see this region's nucleotide sequence