Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02030 and A4249_RS02035 are separated by 294 nucleotides A4249_RS02035 and A4249_RS02040 are separated by 70 nucleotides
A4249_RS02030: A4249_RS02030 - sialidase family protein, at 416,651 to 418,918
_RS02030
A4249_RS02035: A4249_RS02035 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 419,213 to 421,768
_RS02035
A4249_RS02040: A4249_RS02040 - cation:proton antiporter, at 421,839 to 423,089
_RS02040
Position (kb) 419
420
421
422 Strain fitness (log2 ratio) -2
-1
0
1
2 at 418.221 kb on + strand, within A4249_RS02030 at 418.221 kb on + strand, within A4249_RS02030 at 418.221 kb on + strand, within A4249_RS02030 at 418.222 kb on - strand, within A4249_RS02030 at 418.373 kb on - strand, within A4249_RS02030 at 418.440 kb on + strand, within A4249_RS02030 at 418.440 kb on + strand, within A4249_RS02030 at 418.440 kb on + strand, within A4249_RS02030 at 418.440 kb on + strand, within A4249_RS02030 at 418.441 kb on - strand, within A4249_RS02030 at 418.441 kb on - strand, within A4249_RS02030 at 418.441 kb on - strand, within A4249_RS02030 at 418.441 kb on - strand, within A4249_RS02030 at 418.447 kb on + strand, within A4249_RS02030 at 418.447 kb on + strand, within A4249_RS02030 at 418.447 kb on + strand, within A4249_RS02030 at 418.448 kb on - strand, within A4249_RS02030 at 418.448 kb on - strand, within A4249_RS02030 at 418.448 kb on - strand, within A4249_RS02030 at 418.448 kb on - strand, within A4249_RS02030 at 418.448 kb on - strand, within A4249_RS02030 at 418.448 kb on - strand, within A4249_RS02030 at 418.616 kb on - strand, within A4249_RS02030 at 418.616 kb on - strand, within A4249_RS02030 at 418.616 kb on - strand, within A4249_RS02030 at 418.749 kb on + strand at 418.749 kb on + strand at 418.750 kb on - strand at 418.750 kb on - strand at 418.750 kb on - strand at 418.750 kb on - strand at 418.830 kb on + strand at 418.830 kb on + strand at 418.830 kb on + strand at 418.831 kb on - strand at 418.831 kb on - strand at 418.831 kb on - strand at 418.831 kb on - strand at 419.008 kb on - strand at 419.009 kb on + strand at 419.009 kb on + strand at 419.009 kb on + strand at 419.009 kb on + strand at 419.010 kb on - strand at 419.010 kb on - strand at 419.010 kb on - strand at 419.224 kb on + strand at 419.225 kb on - strand at 419.225 kb on - strand at 419.540 kb on + strand, within A4249_RS02035 at 419.541 kb on - strand, within A4249_RS02035 at 419.541 kb on - strand, within A4249_RS02035 at 419.681 kb on + strand, within A4249_RS02035 at 419.681 kb on + strand, within A4249_RS02035 at 419.682 kb on - strand, within A4249_RS02035 at 419.682 kb on - strand, within A4249_RS02035 at 419.682 kb on - strand, within A4249_RS02035 at 419.894 kb on + strand, within A4249_RS02035 at 419.894 kb on + strand, within A4249_RS02035 at 419.895 kb on - strand, within A4249_RS02035 at 419.895 kb on - strand, within A4249_RS02035 at 419.895 kb on - strand, within A4249_RS02035 at 419.895 kb on - strand, within A4249_RS02035 at 419.895 kb on - strand, within A4249_RS02035 at 419.895 kb on - strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.924 kb on + strand, within A4249_RS02035 at 419.925 kb on - strand, within A4249_RS02035 at 419.925 kb on - strand, within A4249_RS02035 at 419.925 kb on - strand, within A4249_RS02035 at 419.992 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.353 kb on + strand, within A4249_RS02035 at 420.354 kb on - strand, within A4249_RS02035 at 420.354 kb on - strand, within A4249_RS02035 at 420.354 kb on - strand, within A4249_RS02035 at 420.354 kb on - strand, within A4249_RS02035 at 420.354 kb on - strand, within A4249_RS02035 at 420.547 kb on - strand, within A4249_RS02035 at 420.824 kb on + strand, within A4249_RS02035 at 420.824 kb on + strand, within A4249_RS02035 at 420.824 kb on + strand, within A4249_RS02035 at 420.825 kb on - strand, within A4249_RS02035 at 420.825 kb on - strand, within A4249_RS02035 at 421.160 kb on + strand, within A4249_RS02035 at 421.160 kb on + strand, within A4249_RS02035 at 421.161 kb on - strand, within A4249_RS02035 at 421.161 kb on - strand, within A4249_RS02035 at 421.161 kb on - strand, within A4249_RS02035 at 421.161 kb on - strand, within A4249_RS02035 at 421.166 kb on + strand, within A4249_RS02035 at 421.178 kb on + strand, within A4249_RS02035 at 421.178 kb on + strand, within A4249_RS02035 at 421.178 kb on + strand, within A4249_RS02035 at 421.178 kb on + strand, within A4249_RS02035 at 421.178 kb on + strand, within A4249_RS02035 at 421.178 kb on + strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.179 kb on - strand, within A4249_RS02035 at 421.253 kb on + strand, within A4249_RS02035 at 421.253 kb on + strand, within A4249_RS02035 at 421.254 kb on - strand, within A4249_RS02035 at 421.254 kb on - strand, within A4249_RS02035 at 421.254 kb on - strand, within A4249_RS02035 at 421.567 kb on + strand at 421.568 kb on - strand at 421.568 kb on - strand at 421.767 kb on - strand at 421.890 kb on + strand at 421.891 kb on - strand at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.046 kb on + strand, within A4249_RS02040 at 422.047 kb on - strand, within A4249_RS02040 at 422.047 kb on - strand, within A4249_RS02040 at 422.047 kb on - strand, within A4249_RS02040 at 422.047 kb on - strand, within A4249_RS02040 at 422.047 kb on - strand, within A4249_RS02040 at 422.047 kb on - strand, within A4249_RS02040 at 422.047 kb on - strand, within A4249_RS02040
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 418,221 + A4249_RS02030 0.69 +0.6 418,221 + A4249_RS02030 0.69 +0.7 418,221 + A4249_RS02030 0.69 -2.2 418,222 - A4249_RS02030 0.69 +0.0 418,373 - A4249_RS02030 0.76 +0.5 418,440 + A4249_RS02030 0.79 +0.7 418,440 + A4249_RS02030 0.79 -0.2 418,440 + A4249_RS02030 0.79 -0.8 418,440 + A4249_RS02030 0.79 -0.8 418,441 - A4249_RS02030 0.79 +0.3 418,441 - A4249_RS02030 0.79 +0.1 418,441 - A4249_RS02030 0.79 +0.2 418,441 - A4249_RS02030 0.79 -0.1 418,447 + A4249_RS02030 0.79 -1.3 418,447 + A4249_RS02030 0.79 +0.5 418,447 + A4249_RS02030 0.79 -0.3 418,448 - A4249_RS02030 0.79 -0.5 418,448 - A4249_RS02030 0.79 +0.4 418,448 - A4249_RS02030 0.79 +0.0 418,448 - A4249_RS02030 0.79 -0.2 418,448 - A4249_RS02030 0.79 -0.1 418,448 - A4249_RS02030 0.79 +1.1 418,616 - A4249_RS02030 0.87 -1.3 418,616 - A4249_RS02030 0.87 -0.8 418,616 - A4249_RS02030 0.87 +0.7 418,749 + +0.1 418,749 + -0.4 418,750 - +1.2 418,750 - -0.3 418,750 - +0.6 418,750 - +0.6 418,830 + -1.8 418,830 + -1.3 418,830 + -1.0 418,831 - +0.5 418,831 - +0.3 418,831 - +0.3 418,831 - -1.2 419,008 - -0.5 419,009 + -0.5 419,009 + -0.3 419,009 + +0.1 419,009 + +1.0 419,010 - +0.1 419,010 - -1.7 419,010 - +1.0 419,224 + -0.3 419,225 - +0.7 419,225 - -0.4 419,540 + A4249_RS02035 0.13 -0.6 419,541 - A4249_RS02035 0.13 -0.3 419,541 - A4249_RS02035 0.13 -0.2 419,681 + A4249_RS02035 0.18 +0.4 419,681 + A4249_RS02035 0.18 +0.5 419,682 - A4249_RS02035 0.18 +0.0 419,682 - A4249_RS02035 0.18 -1.5 419,682 - A4249_RS02035 0.18 +0.5 419,894 + A4249_RS02035 0.27 -0.7 419,894 + A4249_RS02035 0.27 -0.5 419,895 - A4249_RS02035 0.27 +1.1 419,895 - A4249_RS02035 0.27 -0.7 419,895 - A4249_RS02035 0.27 +0.8 419,895 - A4249_RS02035 0.27 +0.7 419,895 - A4249_RS02035 0.27 +2.0 419,895 - A4249_RS02035 0.27 +0.1 419,924 + A4249_RS02035 0.28 -1.7 419,924 + A4249_RS02035 0.28 +1.0 419,924 + A4249_RS02035 0.28 +1.1 419,924 + A4249_RS02035 0.28 -0.6 419,924 + A4249_RS02035 0.28 +0.5 419,924 + A4249_RS02035 0.28 +0.6 419,924 + A4249_RS02035 0.28 -0.3 419,924 + A4249_RS02035 0.28 +0.9 419,925 - A4249_RS02035 0.28 -1.1 419,925 - A4249_RS02035 0.28 -0.4 419,925 - A4249_RS02035 0.28 +0.0 419,992 + A4249_RS02035 0.30 +0.4 420,353 + A4249_RS02035 0.45 +0.4 420,353 + A4249_RS02035 0.45 -0.5 420,353 + A4249_RS02035 0.45 -0.4 420,353 + A4249_RS02035 0.45 -0.9 420,353 + A4249_RS02035 0.45 -0.5 420,353 + A4249_RS02035 0.45 +2.2 420,353 + A4249_RS02035 0.45 +0.3 420,353 + A4249_RS02035 0.45 +0.5 420,353 + A4249_RS02035 0.45 -0.1 420,353 + A4249_RS02035 0.45 -0.5 420,354 - A4249_RS02035 0.45 +0.7 420,354 - A4249_RS02035 0.45 +0.6 420,354 - A4249_RS02035 0.45 -1.1 420,354 - A4249_RS02035 0.45 +0.0 420,354 - A4249_RS02035 0.45 +0.4 420,547 - A4249_RS02035 0.52 -0.3 420,824 + A4249_RS02035 0.63 -1.4 420,824 + A4249_RS02035 0.63 +0.1 420,824 + A4249_RS02035 0.63 +1.3 420,825 - A4249_RS02035 0.63 -0.2 420,825 - A4249_RS02035 0.63 +0.6 421,160 + A4249_RS02035 0.76 +0.9 421,160 + A4249_RS02035 0.76 +0.4 421,161 - A4249_RS02035 0.76 +1.3 421,161 - A4249_RS02035 0.76 -1.5 421,161 - A4249_RS02035 0.76 -1.6 421,161 - A4249_RS02035 0.76 +0.6 421,166 + A4249_RS02035 0.76 -0.1 421,178 + A4249_RS02035 0.77 +0.1 421,178 + A4249_RS02035 0.77 +0.7 421,178 + A4249_RS02035 0.77 +0.1 421,178 + A4249_RS02035 0.77 +0.7 421,178 + A4249_RS02035 0.77 +0.0 421,178 + A4249_RS02035 0.77 -1.3 421,179 - A4249_RS02035 0.77 +0.0 421,179 - A4249_RS02035 0.77 -1.6 421,179 - A4249_RS02035 0.77 -0.4 421,179 - A4249_RS02035 0.77 +0.5 421,179 - A4249_RS02035 0.77 +0.1 421,179 - A4249_RS02035 0.77 +0.3 421,179 - A4249_RS02035 0.77 -0.4 421,179 - A4249_RS02035 0.77 -0.8 421,253 + A4249_RS02035 0.80 -0.6 421,253 + A4249_RS02035 0.80 -0.2 421,254 - A4249_RS02035 0.80 -0.2 421,254 - A4249_RS02035 0.80 +0.0 421,254 - A4249_RS02035 0.80 -0.3 421,567 + +0.2 421,568 - +0.0 421,568 - +0.7 421,767 - +0.1 421,890 + -0.0 421,891 - -0.0 422,046 + A4249_RS02040 0.17 +0.0 422,046 + A4249_RS02040 0.17 +0.1 422,046 + A4249_RS02040 0.17 -1.7 422,046 + A4249_RS02040 0.17 -1.0 422,046 + A4249_RS02040 0.17 -0.7 422,046 + A4249_RS02040 0.17 -0.2 422,046 + A4249_RS02040 0.17 +0.7 422,046 + A4249_RS02040 0.17 -0.2 422,046 + A4249_RS02040 0.17 +0.3 422,046 + A4249_RS02040 0.17 -1.1 422,047 - A4249_RS02040 0.17 -0.7 422,047 - A4249_RS02040 0.17 -1.9 422,047 - A4249_RS02040 0.17 -0.1 422,047 - A4249_RS02040 0.17 +0.7 422,047 - A4249_RS02040 0.17 +0.1 422,047 - A4249_RS02040 0.17 +0.3 422,047 - A4249_RS02040 0.17 -0.5
Or see this region's nucleotide sequence