Strain Fitness in Escherichia coli ECRC102 around NIAGMN_23085

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,541,488	+	appA	NIAGMN_23080	0.34	-2.0
4,541,489	-	appA	NIAGMN_23080	0.34	+0.3
4,541,623	+	appA	NIAGMN_23080	0.45	+0.3
4,541,881	-	appA	NIAGMN_23080	0.64	-0.4
4,542,026	-	appA	NIAGMN_23080	0.75	+0.3
4,542,028	+	appA	NIAGMN_23080	0.76	+0.5
4,542,344	+				+0.3
4,542,345	-				+1.2
4,542,456	-				-2.5
4,542,487	-				+0.7
4,542,487	-				-2.4
4,542,487	-				-1.6
4,542,487	-				+0.9
4,542,487	-				+0.9
4,542,487	-				-1.5
4,542,498	-				-0.5
4,542,498	-				-0.5
4,542,502	-				-0.9
4,542,502	-				-1.5
4,542,504	-				+0.4
4,542,507	+				-0.9
4,542,516	-				-0.7
4,542,535	-				-1.7
4,542,535	-				+1.2
4,542,868	-	etk	NIAGMN_23085	0.18	-0.7
4,542,879	-	etk	NIAGMN_23085	0.19	-0.2
4,542,919	-	etk	NIAGMN_23085	0.21	-0.1
4,542,952	-	etk	NIAGMN_23085	0.22	-0.7
4,543,054	-	etk	NIAGMN_23085	0.27	-1.0
4,543,103	-	etk	NIAGMN_23085	0.29	-0.5
4,543,159	-	etk	NIAGMN_23085	0.32	+1.0
4,543,481	-	etk	NIAGMN_23085	0.47	+0.6
4,543,481	-	etk	NIAGMN_23085	0.47	+0.7
4,543,491	-	etk	NIAGMN_23085	0.47	+0.6
4,543,510	+	etk	NIAGMN_23085	0.48	+1.3
4,543,511	-	etk	NIAGMN_23085	0.48	+0.7
4,543,570	-	etk	NIAGMN_23085	0.51	-2.0
4,543,570	-	etk	NIAGMN_23085	0.51	+0.5
4,543,626	-	etk	NIAGMN_23085	0.53	-2.7
4,543,647	-	etk	NIAGMN_23085	0.54	+1.7
4,543,647	-	etk	NIAGMN_23085	0.54	+0.9
4,543,647	-	etk	NIAGMN_23085	0.54	+0.9
4,543,647	-	etk	NIAGMN_23085	0.54	+2.0
4,543,832	-	etk	NIAGMN_23085	0.63	+0.6
4,543,890	-	etk	NIAGMN_23085	0.65	-1.3
4,543,951	-	etk	NIAGMN_23085	0.68	+0.8
4,544,071	-	etk	NIAGMN_23085	0.74	-1.4
4,544,158	-	etk	NIAGMN_23085	0.78	-0.3
4,544,158	-	etk	NIAGMN_23085	0.78	-3.5
4,544,158	-	etk	NIAGMN_23085	0.78	-0.1
4,544,221	-	etk	NIAGMN_23085	0.80	-0.5
4,544,413	-	etk	NIAGMN_23085	0.89	-2.8
4,544,413	-	etk	NIAGMN_23085	0.89	+1.0
4,544,413	-	etk	NIAGMN_23085	0.89	-0.0
4,544,413	-	etk	NIAGMN_23085	0.89	+0.5
4,544,413	-	etk	NIAGMN_23085	0.89	+1.4
4,544,495	-				+2.5
4,544,632	-				-0.5
4,544,638	-				-1.0
4,544,638	-				-0.8
4,544,650	-				+1.3
4,544,747	-	etp	NIAGMN_23090	0.18	+0.5
4,544,747	-	etp	NIAGMN_23090	0.18	+0.4
4,544,843	-	etp	NIAGMN_23090	0.40	-0.9
4,544,843	-	etp	NIAGMN_23090	0.40	-1.7
4,544,903	-	etp	NIAGMN_23090	0.53	-1.2
4,544,903	-	etp	NIAGMN_23090	0.53	+1.1
4,544,903	-	etp	NIAGMN_23090	0.53	-1.7
4,545,219	-	gfcE	NIAGMN_23095	0.10	-1.8
4,545,219	-	gfcE	NIAGMN_23095	0.10	+0.1
4,545,294	-	gfcE	NIAGMN_23095	0.17	+1.3
4,545,298	-	gfcE	NIAGMN_23095	0.17	+0.0
4,545,379	-	gfcE	NIAGMN_23095	0.24	-2.9
4,545,500	-	gfcE	NIAGMN_23095	0.35	+0.2
4,545,581	-	gfcE	NIAGMN_23095	0.42	-1.3