Strain Fitness in Escherichia coli ECRC102 around NIAGMN_21045

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,168,264	+	napH	NIAGMN_21035	0.39	-1.1
4,168,264	+	napH	NIAGMN_21035	0.39	+1.3
4,168,393	-	napH	NIAGMN_21035	0.68	+1.5
4,168,402	-	napH	NIAGMN_21035	0.70	-0.3
4,168,448	-	napH	NIAGMN_21035	0.80	-3.2
4,168,470	-	napH	NIAGMN_21035	0.85	+0.5
4,168,535	-				+0.3
4,168,542	+				-1.5
4,168,543	-				+0.9
4,168,543	-				-0.6
4,168,563	+				+0.6
4,168,677	+	napC	NIAGMN_21040	0.22	+1.6
4,168,719	+	napC	NIAGMN_21040	0.29	+0.4
4,168,719	+	napC	NIAGMN_21040	0.29	-0.9
4,168,720	-	napC	NIAGMN_21040	0.29	-2.3
4,168,757	-	napC	NIAGMN_21040	0.35	+0.6
4,168,866	+	napC	NIAGMN_21040	0.53	-2.3
4,168,866	+	napC	NIAGMN_21040	0.53	-0.7
4,168,866	+	napC	NIAGMN_21040	0.53	-1.1
4,168,866	+	napC	NIAGMN_21040	0.53	-0.2
4,168,867	-	napC	NIAGMN_21040	0.53	+1.1
4,168,867	-	napC	NIAGMN_21040	0.53	-2.9
4,168,876	+	napC	NIAGMN_21040	0.55	+1.5
4,168,971	+	napC	NIAGMN_21040	0.70	+2.1
4,168,971	+	napC	NIAGMN_21040	0.70	+0.4
4,168,971	+	napC	NIAGMN_21040	0.70	+0.2
4,168,989	+	napC	NIAGMN_21040	0.73	-1.2
4,168,989	+	napC	NIAGMN_21040	0.73	+0.7
4,169,010	+	napC	NIAGMN_21040	0.77	-2.3
4,169,010	+	napC	NIAGMN_21040	0.77	+0.2
4,169,010	+	napC	NIAGMN_21040	0.77	+0.5
4,169,016	+	napC	NIAGMN_21040	0.78	+0.8
4,169,016	+	napC	NIAGMN_21040	0.78	+0.4
4,169,016	+	napC	NIAGMN_21040	0.78	-1.0
4,169,213	+				+0.7
4,169,213	+				-1.7
4,169,217	+				+0.5
4,169,217	+				+1.4
4,169,269	-	ccmA	NIAGMN_21045	0.17	-4.0
4,169,380	+	ccmA	NIAGMN_21045	0.34	+0.2
4,169,380	+	ccmA	NIAGMN_21045	0.34	+0.6
4,169,380	+	ccmA	NIAGMN_21045	0.34	-0.8
4,169,530	-	ccmA	NIAGMN_21045	0.59	-1.8
4,169,671	-	ccmA	NIAGMN_21045	0.82	+0.4
4,169,683	-	ccmA	NIAGMN_21045	0.83	-1.8
4,169,873	-	ccmB	NIAGMN_21050	0.14	+2.2
4,169,873	-	ccmB	NIAGMN_21050	0.14	+1.9
4,169,873	-	ccmB	NIAGMN_21050	0.14	-1.3
4,169,873	-	ccmB	NIAGMN_21050	0.14	-1.5
4,169,925	-	ccmB	NIAGMN_21050	0.22	+0.8
4,169,925	-	ccmB	NIAGMN_21050	0.22	-0.3
4,169,925	-	ccmB	NIAGMN_21050	0.22	-0.9
4,169,939	+	ccmB	NIAGMN_21050	0.24	+1.1
4,170,103	+	ccmB	NIAGMN_21050	0.49	-0.6
4,170,124	+	ccmB	NIAGMN_21050	0.52	-1.6
4,170,150	+	ccmB	NIAGMN_21050	0.56	-1.3
4,170,242	+	ccmB	NIAGMN_21050	0.70	+0.8
4,170,243	-	ccmB	NIAGMN_21050	0.70	+0.5
4,170,332	+	ccmB	NIAGMN_21050	0.83	+0.8
4,170,332	+	ccmB	NIAGMN_21050	0.83	+2.0
4,170,397	+				-3.1
4,170,398	-				-2.3
4,170,424	+				+0.1
4,170,484	+				-1.3
4,170,484	+				-0.8
4,170,484	+				+0.4
4,170,485	-				-1.0
4,170,547	+				+0.1
4,170,627	-	ccmC	NIAGMN_21055	0.19	+0.6
4,170,640	+	ccmC	NIAGMN_21055	0.21	+0.3
4,170,640	+	ccmC	NIAGMN_21055	0.21	+2.8
4,170,640	+	ccmC	NIAGMN_21055	0.21	-0.6
4,170,652	+	ccmC	NIAGMN_21055	0.23	+0.1
4,170,652	+	ccmC	NIAGMN_21055	0.23	+1.0
4,170,656	+	ccmC	NIAGMN_21055	0.23	+1.5
4,170,656	+	ccmC	NIAGMN_21055	0.23	-0.2
4,170,656	+	ccmC	NIAGMN_21055	0.23	-0.5
4,170,695	+	ccmC	NIAGMN_21055	0.28	-0.2
4,170,695	+	ccmC	NIAGMN_21055	0.28	-0.2
4,170,695	+	ccmC	NIAGMN_21055	0.28	+1.9
4,170,695	+	ccmC	NIAGMN_21055	0.28	-3.9
4,170,696	-	ccmC	NIAGMN_21055	0.29	-1.6
4,170,696	-	ccmC	NIAGMN_21055	0.29	-0.3