Strain Fitness in Escherichia coli ECRC102 around NIAGMN_12500

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,472,010	+				+0.2
2,472,011	-				+0.5
2,472,011	-				-3.2
2,472,011	-				-0.4
2,472,034	-				+1.1
2,472,034	-				+1.1
2,472,036	+				-1.1
2,472,036	+				-0.4
2,472,099	+				+0.9
2,472,102	+				-0.8
2,472,102	+				+2.3
2,472,103	-				-1.1
2,472,152	+	rbsC	NIAGMN_12495	0.12	-0.2
2,472,229	+	rbsC	NIAGMN_12495	0.20	+0.2
2,472,229	+	rbsC	NIAGMN_12495	0.20	-0.8
2,472,230	-	rbsC	NIAGMN_12495	0.20	+1.4
2,472,230	-	rbsC	NIAGMN_12495	0.20	+2.2
2,472,230	-	rbsC	NIAGMN_12495	0.20	-1.4
2,472,230	-	rbsC	NIAGMN_12495	0.20	-0.6
2,472,330	+	rbsC	NIAGMN_12495	0.31	-0.1
2,472,408	+	rbsC	NIAGMN_12495	0.39	-0.8
2,472,409	-	rbsC	NIAGMN_12495	0.39	+0.6
2,472,438	+	rbsC	NIAGMN_12495	0.42	-0.9
2,472,438	+	rbsC	NIAGMN_12495	0.42	-2.3
2,472,438	+	rbsC	NIAGMN_12495	0.42	+1.6
2,472,438	+	rbsC	NIAGMN_12495	0.42	+1.4
2,472,439	-	rbsC	NIAGMN_12495	0.42	-0.6
2,472,439	-	rbsC	NIAGMN_12495	0.42	-1.4
2,472,439	-	rbsC	NIAGMN_12495	0.42	+2.6
2,472,439	-	rbsC	NIAGMN_12495	0.42	-1.2
2,472,439	-	rbsC	NIAGMN_12495	0.42	-3.5
2,472,439	-	rbsC	NIAGMN_12495	0.42	-0.1
2,472,506	-	rbsC	NIAGMN_12495	0.49	-0.8
2,472,569	-	rbsC	NIAGMN_12495	0.55	-0.7
2,472,570	+	rbsC	NIAGMN_12495	0.55	-0.6
2,472,570	+	rbsC	NIAGMN_12495	0.55	-3.0
2,472,571	-	rbsC	NIAGMN_12495	0.55	+0.6
2,472,571	-	rbsC	NIAGMN_12495	0.55	+0.3
2,472,571	-	rbsC	NIAGMN_12495	0.55	+2.1
2,472,593	+	rbsC	NIAGMN_12495	0.58	+1.2
2,472,594	-	rbsC	NIAGMN_12495	0.58	-0.3
2,472,594	-	rbsC	NIAGMN_12495	0.58	+2.2
2,472,594	-	rbsC	NIAGMN_12495	0.58	-0.9
2,472,613	+	rbsC	NIAGMN_12495	0.60	-0.0
2,472,645	-	rbsC	NIAGMN_12495	0.63	+0.2
2,472,680	+	rbsC	NIAGMN_12495	0.67	-1.9
2,472,733	+	rbsC	NIAGMN_12495	0.72	-1.5
2,472,733	+	rbsC	NIAGMN_12495	0.72	+1.7
2,472,733	+	rbsC	NIAGMN_12495	0.72	-0.5
2,472,734	-	rbsC	NIAGMN_12495	0.72	+0.0
2,472,734	-	rbsC	NIAGMN_12495	0.72	-1.3
2,472,734	-	rbsC	NIAGMN_12495	0.72	+0.1
2,472,734	-	rbsC	NIAGMN_12495	0.72	-3.2
2,472,734	-	rbsC	NIAGMN_12495	0.72	-0.4
2,472,734	-	rbsC	NIAGMN_12495	0.72	+0.0
2,472,826	+	rbsC	NIAGMN_12495	0.82	-0.6
2,472,856	+	rbsC	NIAGMN_12495	0.85	+0.4
2,472,857	-	rbsC	NIAGMN_12495	0.85	+1.3
2,472,863	+	rbsC	NIAGMN_12495	0.86	-1.7
2,472,868	+	rbsC	NIAGMN_12495	0.86	+0.7
2,472,869	-	rbsC	NIAGMN_12495	0.86	-0.2
2,472,869	-	rbsC	NIAGMN_12495	0.86	+0.8
2,472,893	+	rbsC	NIAGMN_12495	0.89	+2.1
2,472,894	-	rbsC	NIAGMN_12495	0.89	+1.1
2,472,970	-				+0.1
2,473,026	-				+1.9
2,473,026	-				-2.1
2,473,050	+				+0.7
2,473,050	+				-1.3
2,473,051	-				+0.4
2,473,135	-				+0.6
2,473,135	-				+0.2
2,473,137	+				+0.3
2,473,137	+				-0.9
2,473,138	-				+1.5
2,473,138	-				+0.1
2,473,138	-				-0.3
2,473,138	-				-0.2
2,473,138	-				+1.3
2,473,207	+	rbsA	NIAGMN_12500	0.13	-0.1
2,473,207	+	rbsA	NIAGMN_12500	0.13	-0.2
2,473,207	+	rbsA	NIAGMN_12500	0.13	-0.6
2,473,207	+	rbsA	NIAGMN_12500	0.13	+0.4
2,473,207	+	rbsA	NIAGMN_12500	0.13	+0.8
2,473,207	+	rbsA	NIAGMN_12500	0.13	+0.2
2,473,208	-	rbsA	NIAGMN_12500	0.13	+0.4
2,473,208	-	rbsA	NIAGMN_12500	0.13	-0.5
2,473,234	-	rbsA	NIAGMN_12500	0.15	-1.6
2,473,234	-	rbsA	NIAGMN_12500	0.15	-0.3
2,473,376	+	rbsA	NIAGMN_12500	0.25	+0.1
2,473,471	-	rbsA	NIAGMN_12500	0.31	-0.4
2,473,488	+	rbsA	NIAGMN_12500	0.32	+0.9
2,473,489	-	rbsA	NIAGMN_12500	0.32	-0.4
2,473,489	-	rbsA	NIAGMN_12500	0.32	+0.2
2,473,489	-	rbsA	NIAGMN_12500	0.32	-4.1
2,473,518	-	rbsA	NIAGMN_12500	0.34	+1.0
2,473,518	-	rbsA	NIAGMN_12500	0.34	-3.5
2,473,519	+	rbsA	NIAGMN_12500	0.34	-1.1
2,473,519	+	rbsA	NIAGMN_12500	0.34	+0.6
2,473,519	+	rbsA	NIAGMN_12500	0.34	-3.0
2,473,519	+	rbsA	NIAGMN_12500	0.34	+0.7
2,473,519	+	rbsA	NIAGMN_12500	0.34	-1.3
2,473,519	+	rbsA	NIAGMN_12500	0.34	-1.6
2,473,519	+	rbsA	NIAGMN_12500	0.34	+0.3
2,473,519	+	rbsA	NIAGMN_12500	0.34	+1.3
2,473,519	+	rbsA	NIAGMN_12500	0.34	+0.3
2,473,519	+	rbsA	NIAGMN_12500	0.34	-0.6
2,473,519	+	rbsA	NIAGMN_12500	0.34	+0.4
2,473,520	-	rbsA	NIAGMN_12500	0.34	-0.2
2,473,520	-	rbsA	NIAGMN_12500	0.34	+1.4
2,473,520	-	rbsA	NIAGMN_12500	0.34	+0.2
2,473,520	-	rbsA	NIAGMN_12500	0.34	+0.3
2,473,520	-	rbsA	NIAGMN_12500	0.34	-2.8
2,473,520	-	rbsA	NIAGMN_12500	0.34	+1.3
2,473,520	-	rbsA	NIAGMN_12500	0.34	-2.3
2,473,520	-	rbsA	NIAGMN_12500	0.34	+0.0
2,473,520	-	rbsA	NIAGMN_12500	0.34	+1.1
2,473,520	-	rbsA	NIAGMN_12500	0.34	-0.4
2,473,520	-	rbsA	NIAGMN_12500	0.34	-0.5
2,473,520	-	rbsA	NIAGMN_12500	0.34	+1.0
2,473,606	-	rbsA	NIAGMN_12500	0.40	-0.7
2,473,606	-	rbsA	NIAGMN_12500	0.40	+0.2
2,473,686	+	rbsA	NIAGMN_12500	0.45	+0.4
2,473,687	-	rbsA	NIAGMN_12500	0.45	-0.3
2,473,691	+	rbsA	NIAGMN_12500	0.46	+0.6
2,473,691	+	rbsA	NIAGMN_12500	0.46	+0.1
2,473,692	-	rbsA	NIAGMN_12500	0.46	-1.5
2,473,853	+	rbsA	NIAGMN_12500	0.56	+0.3
2,473,854	-	rbsA	NIAGMN_12500	0.56	+0.2
2,473,854	-	rbsA	NIAGMN_12500	0.56	-0.7
2,473,922	+	rbsA	NIAGMN_12500	0.61	+0.4
2,473,922	+	rbsA	NIAGMN_12500	0.61	-0.2
2,473,922	+	rbsA	NIAGMN_12500	0.61	+0.8
2,473,922	+	rbsA	NIAGMN_12500	0.61	-0.4
2,473,923	-	rbsA	NIAGMN_12500	0.61	+1.3
2,473,923	-	rbsA	NIAGMN_12500	0.61	+1.3
2,473,923	-	rbsA	NIAGMN_12500	0.61	-2.1
2,473,923	-	rbsA	NIAGMN_12500	0.61	-1.8
2,473,924	+	rbsA	NIAGMN_12500	0.61	+1.2
2,473,924	+	rbsA	NIAGMN_12500	0.61	-1.9
2,473,924	+	rbsA	NIAGMN_12500	0.61	+0.9
2,473,924	+	rbsA	NIAGMN_12500	0.61	+0.1
2,473,924	+	rbsA	NIAGMN_12500	0.61	-0.9
2,473,924	+	rbsA	NIAGMN_12500	0.61	-0.1
2,473,925	-	rbsA	NIAGMN_12500	0.61	+0.4
2,473,925	-	rbsA	NIAGMN_12500	0.61	+0.2
2,473,925	-	rbsA	NIAGMN_12500	0.61	-0.0
2,473,925	-	rbsA	NIAGMN_12500	0.61	-0.1
2,473,925	-	rbsA	NIAGMN_12500	0.61	+0.8
2,473,925	-	rbsA	NIAGMN_12500	0.61	-0.3
2,473,925	-	rbsA	NIAGMN_12500	0.61	-2.2
2,473,925	-	rbsA	NIAGMN_12500	0.61	-0.4
2,473,925	-	rbsA	NIAGMN_12500	0.61	+0.0
2,473,925	-	rbsA	NIAGMN_12500	0.61	+0.5
2,473,925	-	rbsA	NIAGMN_12500	0.61	-0.5
2,473,925	-	rbsA	NIAGMN_12500	0.61	-1.9
2,474,018	+	rbsA	NIAGMN_12500	0.67	-1.2
2,474,019	-	rbsA	NIAGMN_12500	0.67	-1.2
2,474,056	-	rbsA	NIAGMN_12500	0.70	+0.9
2,474,056	-	rbsA	NIAGMN_12500	0.70	-3.3
2,474,124	-	rbsA	NIAGMN_12500	0.74	-1.2
2,474,124	-	rbsA	NIAGMN_12500	0.74	-0.3
2,474,142	-	rbsA	NIAGMN_12500	0.75	-1.2
2,474,155	+	rbsA	NIAGMN_12500	0.76	+1.5
2,474,155	+	rbsA	NIAGMN_12500	0.76	-2.3
2,474,155	+	rbsA	NIAGMN_12500	0.76	+1.0
2,474,156	-	rbsA	NIAGMN_12500	0.76	+0.8
2,474,156	-	rbsA	NIAGMN_12500	0.76	+0.2
2,474,156	-	rbsA	NIAGMN_12500	0.76	+0.6
2,474,156	-	rbsA	NIAGMN_12500	0.76	+0.5
2,474,156	-	rbsA	NIAGMN_12500	0.76	+1.1
2,474,189	+	rbsA	NIAGMN_12500	0.79	+0.3
2,474,190	-	rbsA	NIAGMN_12500	0.79	-0.0
2,474,230	-	rbsA	NIAGMN_12500	0.81	+1.7
2,474,261	+	rbsA	NIAGMN_12500	0.83	-0.3
2,474,262	-	rbsA	NIAGMN_12500	0.83	-0.0
2,474,300	+	rbsA	NIAGMN_12500	0.86	+1.3
2,474,301	-	rbsA	NIAGMN_12500	0.86	-0.3
2,474,325	+	rbsA	NIAGMN_12500	0.88	-0.5
2,474,325	+	rbsA	NIAGMN_12500	0.88	+0.2
2,474,325	+	rbsA	NIAGMN_12500	0.88	-0.1
2,474,326	-	rbsA	NIAGMN_12500	0.88	-3.2
2,474,326	-	rbsA	NIAGMN_12500	0.88	+0.3
2,474,334	-	rbsA	NIAGMN_12500	0.88	-0.4
2,474,348	+	rbsA	NIAGMN_12500	0.89	+0.3
2,474,348	+	rbsA	NIAGMN_12500	0.89	+0.5
2,474,348	+	rbsA	NIAGMN_12500	0.89	-1.0
2,474,349	-	rbsA	NIAGMN_12500	0.89	+0.9
2,474,349	-	rbsA	NIAGMN_12500	0.89	+0.4
2,474,349	-	rbsA	NIAGMN_12500	0.89	+0.6
2,474,350	+	rbsA	NIAGMN_12500	0.89	+1.5
2,474,350	+	rbsA	NIAGMN_12500	0.89	+0.7
2,474,350	+	rbsA	NIAGMN_12500	0.89	-0.3
2,474,350	+	rbsA	NIAGMN_12500	0.89	-0.9
2,474,350	+	rbsA	NIAGMN_12500	0.89	+0.5
2,474,350	+	rbsA	NIAGMN_12500	0.89	+1.6
2,474,350	+	rbsA	NIAGMN_12500	0.89	+0.9
2,474,350	+	rbsA	NIAGMN_12500	0.89	-1.2
2,474,351	-	rbsA	NIAGMN_12500	0.89	+0.6
2,474,351	-	rbsA	NIAGMN_12500	0.89	-0.7
2,474,351	-	rbsA	NIAGMN_12500	0.89	-0.4
2,474,351	-	rbsA	NIAGMN_12500	0.89	-2.0
2,474,351	-	rbsA	NIAGMN_12500	0.89	-0.5
2,474,351	-	rbsA	NIAGMN_12500	0.89	-3.0
2,474,351	-	rbsA	NIAGMN_12500	0.89	+0.1
2,474,351	-	rbsA	NIAGMN_12500	0.89	+1.6
2,474,361	-				-2.0
2,474,361	-				+0.0
2,474,361	-				-0.9
2,474,429	-				+0.5
2,474,436	+				+0.2
2,474,436	+				+1.5
2,474,436	+				+1.0
2,474,436	+				-1.1
2,474,436	+				-0.3
2,474,436	+				-2.7
2,474,436	+				+0.6
2,474,437	-				-0.6
2,474,461	-				+1.3
2,474,461	-				+0.0
2,474,489	+				+2.1
2,474,489	+				-0.5
2,474,490	-				-0.0
2,474,490	-				-0.6
2,474,499	+				+0.5
2,474,499	+				-0.3
2,474,499	+				-0.2
2,474,499	+				-0.5
2,474,499	+				-0.3
2,474,499	+				+0.0
2,474,499	+				-1.5
2,474,499	+				+1.8
2,474,499	+				+1.1
2,474,499	+				-2.1
2,474,500	-				+0.2
2,474,500	-				-1.7
2,474,500	-				-3.2
2,474,548	-				-2.0
2,474,548	-				-2.8
2,474,582	-	rbsD	NIAGMN_12505	0.15	+0.1
2,474,646	+	rbsD	NIAGMN_12505	0.30	-0.2
2,474,646	+	rbsD	NIAGMN_12505	0.30	-2.6
2,474,646	+	rbsD	NIAGMN_12505	0.30	+1.4
2,474,647	-	rbsD	NIAGMN_12505	0.31	+1.8
2,474,647	-	rbsD	NIAGMN_12505	0.31	-0.2
2,474,647	-	rbsD	NIAGMN_12505	0.31	-0.6
2,474,710	-	rbsD	NIAGMN_12505	0.46	-1.5
2,474,784	+	rbsD	NIAGMN_12505	0.63	-0.3
2,474,784	+	rbsD	NIAGMN_12505	0.63	+0.7
2,474,785	-	rbsD	NIAGMN_12505	0.64	+0.6
2,474,785	-	rbsD	NIAGMN_12505	0.64	+1.2
2,474,794	+	rbsD	NIAGMN_12505	0.66	+0.6
2,474,794	+	rbsD	NIAGMN_12505	0.66	+0.3
2,474,794	+	rbsD	NIAGMN_12505	0.66	+0.3
2,474,794	+	rbsD	NIAGMN_12505	0.66	+0.5
2,474,794	+	rbsD	NIAGMN_12505	0.66	-0.1
2,474,795	-	rbsD	NIAGMN_12505	0.66	-0.8
2,474,795	-	rbsD	NIAGMN_12505	0.66	+0.7
2,474,795	-	rbsD	NIAGMN_12505	0.66	+1.7
2,474,795	-	rbsD	NIAGMN_12505	0.66	-0.4
2,474,795	-	rbsD	NIAGMN_12505	0.66	-0.6
2,474,795	-	rbsD	NIAGMN_12505	0.66	+0.2
2,474,806	+	rbsD	NIAGMN_12505	0.69	+1.0
2,474,807	-	rbsD	NIAGMN_12505	0.69	+1.4
2,474,820	+	rbsD	NIAGMN_12505	0.72	+1.5
2,474,845	+	rbsD	NIAGMN_12505	0.78	+0.5
2,474,877	+	rbsD	NIAGMN_12505	0.85	+0.2
2,474,877	+	rbsD	NIAGMN_12505	0.85	+0.3
2,474,878	-	rbsD	NIAGMN_12505	0.86	-1.7
2,474,916	+				-1.7
2,474,917	-				+1.3
2,475,043	+				+1.0
2,475,044	-				+1.2
2,475,044	-				+0.4
2,475,044	-				+0.5
2,475,044	-				+0.2
2,475,055	-				+0.6
2,475,055	-				+0.7
2,475,055	-				-0.5
2,475,121	+				+1.5
2,475,122	-				-0.3
2,475,181	+				-0.4
2,475,181	+				-1.4
2,475,182	-				-1.8
2,475,182	-				+0.8
2,475,198	+				-0.7
2,475,198	+				-1.7
2,475,198	+				+2.1
2,475,198	+				-0.6
2,475,199	-				-0.1
2,475,199	-				+0.6
2,475,199	-				-0.9
2,475,222	+				+1.2
2,475,222	+				+2.2
2,475,223	-				+0.7
2,475,262	+				-0.1
2,475,262	+				+1.0
2,475,263	-				+0.1
2,475,263	-				+0.7
2,475,263	-				-1.1
2,475,263	-				+1.3
2,475,293	+	kup	NIAGMN_12510	0.10	-0.2
2,475,294	-	kup	NIAGMN_12510	0.10	-0.1
2,475,354	+	kup	NIAGMN_12510	0.13	+0.1
2,475,354	+	kup	NIAGMN_12510	0.13	-2.5
2,475,354	+	kup	NIAGMN_12510	0.13	-1.2
2,475,354	+	kup	NIAGMN_12510	0.13	-1.9
2,475,354	+	kup	NIAGMN_12510	0.13	-4.3
2,475,354	+	kup	NIAGMN_12510	0.13	-0.4
2,475,355	-	kup	NIAGMN_12510	0.13	+1.8
2,475,415	+	kup	NIAGMN_12510	0.17	-0.1
2,475,423	+	kup	NIAGMN_12510	0.17	-4.0
2,475,423	+	kup	NIAGMN_12510	0.17	+0.8
2,475,423	+	kup	NIAGMN_12510	0.17	-1.7
2,475,423	+	kup	NIAGMN_12510	0.17	-2.1
2,475,423	+	kup	NIAGMN_12510	0.17	+0.9
2,475,424	-	kup	NIAGMN_12510	0.17	-1.6
2,475,424	-	kup	NIAGMN_12510	0.17	-0.4
2,475,424	-	kup	NIAGMN_12510	0.17	+1.0
2,475,424	-	kup	NIAGMN_12510	0.17	-0.6
2,475,424	-	kup	NIAGMN_12510	0.17	+3.0
2,475,424	-	kup	NIAGMN_12510	0.17	+0.3
2,475,450	-	kup	NIAGMN_12510	0.19	-0.2
2,475,473	+	kup	NIAGMN_12510	0.20	-2.6
2,475,473	+	kup	NIAGMN_12510	0.20	+0.5
2,475,482	-	kup	NIAGMN_12510	0.20	+0.3
2,475,488	-	kup	NIAGMN_12510	0.21	-0.4