Strain Fitness in Escherichia coli ECRC101 around MCAODC_27860

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,318,844	-				+1.1
2,318,847	-				+0.5
2,318,913	-				-1.7
2,318,913	-				-0.6
2,318,919	+				-0.2
2,318,942	+				-3.6
2,318,973	+				+3.3
2,318,973	+				+2.5
2,318,974	-				+0.9
2,318,980	-				+1.1
2,319,008	+				-0.2
2,319,008	+				+1.8
2,319,009	-				+1.5
2,319,009	-				-2.6
2,319,031	-				-4.0
2,319,088	+	iraP	MCAODC_27855	0.11	-1.6
2,319,093	-	iraP	MCAODC_27855	0.13	-0.8
2,319,143	-	iraP	MCAODC_27855	0.33	-3.9
2,319,164	-	iraP	MCAODC_27855	0.41	+1.8
2,319,241	+	iraP	MCAODC_27855	0.70	+0.1
2,319,242	-	iraP	MCAODC_27855	0.70	+0.2
2,319,242	-	iraP	MCAODC_27855	0.70	-3.0
2,319,292	+	iraP	MCAODC_27855	0.90	-1.5
2,319,292	+	iraP	MCAODC_27855	0.90	+1.1
2,319,325	-				-0.4
2,319,341	+				-0.3
2,319,341	+				+0.7
2,319,358	+				+0.3
2,319,376	-				+0.9
2,319,391	+				-1.8
2,319,398	-				+1.8
2,319,412	-				-0.1
2,319,552	+				-1.2
2,319,553	-				+0.0
2,319,586	+				+0.5
2,319,741	+				+0.7
2,319,741	+				+0.0
2,319,741	+				+0.7
2,319,741	+				+0.7
2,319,742	-				+0.8
2,319,777	+				-1.4
2,319,777	+				-0.2
2,319,949	+	ddlA	MCAODC_27860	0.15	-0.2
2,319,956	+	ddlA	MCAODC_27860	0.16	-0.6
2,319,957	-	ddlA	MCAODC_27860	0.16	-0.1
2,320,023	+	ddlA	MCAODC_27860	0.22	+1.0
2,320,024	-	ddlA	MCAODC_27860	0.22	+0.8
2,320,041	+	ddlA	MCAODC_27860	0.24	+1.7
2,320,164	-	ddlA	MCAODC_27860	0.35	-2.2
2,320,164	-	ddlA	MCAODC_27860	0.35	-3.7
2,320,194	+	ddlA	MCAODC_27860	0.38	-2.5
2,320,254	+	ddlA	MCAODC_27860	0.43	-0.3
2,320,254	+	ddlA	MCAODC_27860	0.43	+1.4
2,320,319	+	ddlA	MCAODC_27860	0.49	-1.3
2,320,331	+	ddlA	MCAODC_27860	0.50	-0.6
2,320,373	+	ddlA	MCAODC_27860	0.54	+0.8
2,320,373	+	ddlA	MCAODC_27860	0.54	-0.2
2,320,374	-	ddlA	MCAODC_27860	0.54	+0.9
2,320,390	+	ddlA	MCAODC_27860	0.56	-2.1
2,320,390	+	ddlA	MCAODC_27860	0.56	+2.3
2,320,390	+	ddlA	MCAODC_27860	0.56	-4.2
2,320,391	-	ddlA	MCAODC_27860	0.56	+0.1
2,320,428	+	ddlA	MCAODC_27860	0.59	-0.3
2,320,429	-	ddlA	MCAODC_27860	0.59	+1.2
2,320,540	+	ddlA	MCAODC_27860	0.69	+1.8
2,320,541	-	ddlA	MCAODC_27860	0.69	-3.4
2,320,541	-	ddlA	MCAODC_27860	0.69	+0.0
2,320,546	+	ddlA	MCAODC_27860	0.70	+0.5
2,320,547	-	ddlA	MCAODC_27860	0.70	-0.8
2,320,558	+	ddlA	MCAODC_27860	0.71	-2.2
2,320,558	+	ddlA	MCAODC_27860	0.71	+0.5
2,320,558	+	ddlA	MCAODC_27860	0.71	-1.4
2,320,559	-	ddlA	MCAODC_27860	0.71	-0.1
2,320,620	+	ddlA	MCAODC_27860	0.77	+0.0
2,320,758	+	ddlA	MCAODC_27860	0.89	-0.7
2,320,758	+	ddlA	MCAODC_27860	0.89	+1.5
2,320,758	+	ddlA	MCAODC_27860	0.89	-3.8
2,320,759	-	ddlA	MCAODC_27860	0.89	-0.1
2,320,759	-	ddlA	MCAODC_27860	0.89	-2.7
2,320,759	-	ddlA	MCAODC_27860	0.89	+0.1
2,320,759	-	ddlA	MCAODC_27860	0.89	-1.0
2,320,759	-	ddlA	MCAODC_27860	0.89	+0.3
2,320,762	+	ddlA	MCAODC_27860	0.90	+0.8
2,320,795	+				+0.7
2,320,795	+				+0.6
2,320,873	+				+2.0
2,320,873	+				+0.3
2,320,873	+				-3.6
2,320,874	-				-3.5
2,320,877	-				-0.8
2,320,938	-	yaiZ	MCAODC_27865	0.18	-1.0
2,320,961	+	yaiZ	MCAODC_27865	0.29	+1.1
2,320,961	+	yaiZ	MCAODC_27865	0.29	+1.9
2,320,991	-	yaiZ	MCAODC_27865	0.43	-0.3
2,320,991	-	yaiZ	MCAODC_27865	0.43	+0.9
2,321,051	+	yaiZ	MCAODC_27865	0.71	+0.1
2,321,051	+	yaiZ	MCAODC_27865	0.71	+1.9
2,321,052	-	yaiZ	MCAODC_27865	0.72	-3.5
2,321,071	+	yaiZ	MCAODC_27865	0.81	-2.7
2,321,072	-	yaiZ	MCAODC_27865	0.81	-2.8
2,321,072	-	yaiZ	MCAODC_27865	0.81	+0.6
2,321,072	-	yaiZ	MCAODC_27865	0.81	+2.5
2,321,074	+	yaiZ	MCAODC_27865	0.82	-0.8
2,321,075	-	yaiZ	MCAODC_27865	0.83	+2.4
2,321,147	-				+1.5
2,321,172	-				+0.8
2,321,296	+				-2.6
2,321,296	+				-3.3
2,321,296	+				+0.3
2,321,320	-				-2.4
2,321,331	-				-2.0
2,321,404	-	yaiY	MCAODC_27870	0.11	+0.5
2,321,449	+	yaiY	MCAODC_27870	0.25	-1.1
2,321,450	-	yaiY	MCAODC_27870	0.26	-0.8
2,321,505	-	yaiY	MCAODC_27870	0.43	-3.0
2,321,524	+	yaiY	MCAODC_27870	0.50	+1.7
2,321,534	+	yaiY	MCAODC_27870	0.53	+1.0
2,321,580	-	yaiY	MCAODC_27870	0.68	-1.9
2,321,580	-	yaiY	MCAODC_27870	0.68	+0.6
2,321,580	-	yaiY	MCAODC_27870	0.68	-0.7
2,321,580	-	yaiY	MCAODC_27870	0.68	-2.2
2,321,619	-	yaiY	MCAODC_27870	0.80	+0.5
2,321,619	-	yaiY	MCAODC_27870	0.80	-1.8
2,321,649	-				+2.9
2,321,684	+				+0.4
2,321,685	-				+0.3
2,321,696	+				-2.9
2,321,703	+				-0.4
2,321,713	+				+0.9
2,321,750	-				-1.1
2,321,750	-				+1.2