Strain Fitness in Escherichia coli ECRC101 around MCAODC_27605

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,265,749	+				-3.8
2,265,753	-				-0.4
2,265,780	+				-1.1
2,265,862	+	cyoC	MCAODC_27595	0.15	-3.0
2,265,862	+	cyoC	MCAODC_27595	0.15	-1.0
2,265,891	+	cyoC	MCAODC_27595	0.20	-2.3
2,265,904	-	cyoC	MCAODC_27595	0.22	-0.9
2,265,904	-	cyoC	MCAODC_27595	0.22	-2.2
2,265,907	+	cyoC	MCAODC_27595	0.22	-0.8
2,265,907	+	cyoC	MCAODC_27595	0.22	-0.7
2,265,908	-	cyoC	MCAODC_27595	0.23	+0.7
2,265,908	-	cyoC	MCAODC_27595	0.23	-1.0
2,265,948	+	cyoC	MCAODC_27595	0.29	-1.3
2,265,949	-	cyoC	MCAODC_27595	0.29	-3.5
2,266,016	-	cyoC	MCAODC_27595	0.40	-1.6
2,266,040	-	cyoC	MCAODC_27595	0.44	-4.2
2,266,062	+	cyoC	MCAODC_27595	0.48	-1.8
2,266,062	+	cyoC	MCAODC_27595	0.48	+1.0
2,266,062	+	cyoC	MCAODC_27595	0.48	-0.8
2,266,063	-	cyoC	MCAODC_27595	0.48	-4.4
2,266,253	+	cyoC	MCAODC_27595	0.79	-4.4
2,266,254	-	cyoC	MCAODC_27595	0.79	-1.7
2,266,381	+				-0.2
2,266,381	+				-2.4
2,266,381	+				-3.7
2,266,382	-				-1.5
2,266,382	-				-2.8
2,266,394	+				-1.4
2,266,434	+	cyoD	MCAODC_27600	0.15	-1.4
2,266,435	-	cyoD	MCAODC_27600	0.16	+0.3
2,266,448	+	cyoD	MCAODC_27600	0.20	-0.5
2,266,550	-	cyoD	MCAODC_27600	0.51	+0.6
2,266,654	+	cyoD	MCAODC_27600	0.82	-4.6
2,266,654	+	cyoD	MCAODC_27600	0.82	-0.3
2,266,654	+	cyoD	MCAODC_27600	0.82	+0.6
2,266,660	+	cyoD	MCAODC_27600	0.84	-1.8
2,266,661	-	cyoD	MCAODC_27600	0.84	-2.3
2,266,676	+	cyoD	MCAODC_27600	0.89	-0.3
2,266,677	-	cyoD	MCAODC_27600	0.89	-3.1
2,266,692	+				-2.2
2,266,692	+				-4.0
2,266,692	+				-1.4
2,266,710	+				-2.9
2,266,710	+				-3.9
2,266,711	-				+0.2
2,266,723	+				+0.5
2,266,732	+				+0.2
2,266,732	+				-0.5
2,266,733	-				-0.3
2,266,739	+				+1.3
2,266,740	-				+0.6
2,266,844	+	cyoE	MCAODC_27605	0.13	-3.8
2,266,844	+	cyoE	MCAODC_27605	0.13	-0.6
2,266,844	+	cyoE	MCAODC_27605	0.13	-2.5
2,266,845	-	cyoE	MCAODC_27605	0.14	+1.1
2,266,898	+	cyoE	MCAODC_27605	0.20	+2.2
2,266,898	+	cyoE	MCAODC_27605	0.20	-3.0
2,266,898	+	cyoE	MCAODC_27605	0.20	-3.5
2,266,898	+	cyoE	MCAODC_27605	0.20	-3.9
2,266,898	+	cyoE	MCAODC_27605	0.20	-1.5
2,266,898	+	cyoE	MCAODC_27605	0.20	-3.4
2,266,898	+	cyoE	MCAODC_27605	0.20	-1.9
2,266,899	-	cyoE	MCAODC_27605	0.20	-2.9
2,266,899	-	cyoE	MCAODC_27605	0.20	-1.1
2,266,899	-	cyoE	MCAODC_27605	0.20	-2.9
2,266,988	+	cyoE	MCAODC_27605	0.30	-1.1
2,267,017	+	cyoE	MCAODC_27605	0.33	-3.7
2,267,018	-	cyoE	MCAODC_27605	0.33	-0.5
2,267,081	+	cyoE	MCAODC_27605	0.40	-1.9
2,267,094	-	cyoE	MCAODC_27605	0.42	-1.0
2,267,096	-	cyoE	MCAODC_27605	0.42	-0.6
2,267,102	+	cyoE	MCAODC_27605	0.42	-1.5
2,267,102	+	cyoE	MCAODC_27605	0.42	-0.5
2,267,102	+	cyoE	MCAODC_27605	0.42	-0.3
2,267,102	+	cyoE	MCAODC_27605	0.42	-3.5
2,267,102	+	cyoE	MCAODC_27605	0.42	-0.7
2,267,102	+	cyoE	MCAODC_27605	0.42	+1.0
2,267,103	-	cyoE	MCAODC_27605	0.43	-2.6
2,267,103	-	cyoE	MCAODC_27605	0.43	-1.7
2,267,103	-	cyoE	MCAODC_27605	0.43	+1.6
2,267,103	-	cyoE	MCAODC_27605	0.43	-3.9
2,267,174	+	cyoE	MCAODC_27605	0.51	-2.6
2,267,185	-	cyoE	MCAODC_27605	0.52	-4.3
2,267,224	+	cyoE	MCAODC_27605	0.56	-2.1
2,267,225	-	cyoE	MCAODC_27605	0.56	+0.3
2,267,255	+	cyoE	MCAODC_27605	0.60	-2.7
2,267,255	+	cyoE	MCAODC_27605	0.60	-1.9
2,267,256	-	cyoE	MCAODC_27605	0.60	-2.8
2,267,256	-	cyoE	MCAODC_27605	0.60	-3.3
2,267,285	+	cyoE	MCAODC_27605	0.63	-2.4
2,267,285	+	cyoE	MCAODC_27605	0.63	-3.5
2,267,320	-	cyoE	MCAODC_27605	0.67	-3.4
2,267,357	+	cyoE	MCAODC_27605	0.71	+1.7
2,267,357	+	cyoE	MCAODC_27605	0.71	-2.5
2,267,357	+	cyoE	MCAODC_27605	0.71	-0.5
2,267,358	-	cyoE	MCAODC_27605	0.71	+1.2
2,267,358	-	cyoE	MCAODC_27605	0.71	-3.2
2,267,360	-	cyoE	MCAODC_27605	0.71	-4.5
2,267,416	+	cyoE	MCAODC_27605	0.78	-1.0
2,267,416	+	cyoE	MCAODC_27605	0.78	-0.1
2,267,416	+	cyoE	MCAODC_27605	0.78	-0.8
2,267,416	+	cyoE	MCAODC_27605	0.78	-0.2
2,267,417	-	cyoE	MCAODC_27605	0.78	-1.9
2,267,417	-	cyoE	MCAODC_27605	0.78	+0.6
2,267,417	-	cyoE	MCAODC_27605	0.78	-3.6
2,267,417	-	cyoE	MCAODC_27605	0.78	-4.7
2,267,420	+	cyoE	MCAODC_27605	0.78	-1.4
2,267,420	+	cyoE	MCAODC_27605	0.78	-1.6
2,267,457	+	cyoE	MCAODC_27605	0.82	-0.0
2,267,457	+	cyoE	MCAODC_27605	0.82	+0.5
2,267,457	+	cyoE	MCAODC_27605	0.82	-2.9
2,267,457	+	cyoE	MCAODC_27605	0.82	-3.2
2,267,458	-	cyoE	MCAODC_27605	0.82	+1.1
2,267,458	-	cyoE	MCAODC_27605	0.82	-2.9
2,267,461	+	cyoE	MCAODC_27605	0.83	-0.1
2,267,461	+	cyoE	MCAODC_27605	0.83	-4.6
2,267,461	+	cyoE	MCAODC_27605	0.83	-2.8
2,267,527	+				-3.4
2,267,527	+				-1.9
2,267,527	+				-1.7
2,267,527	+				-1.1
2,267,573	-				-0.4
2,267,591	-				-1.7
2,267,663	+				-1.3
2,267,663	+				-1.0
2,267,664	-				-1.6
2,267,664	-				+0.4
2,267,672	-				+0.4
2,267,672	-				+0.3
2,267,731	-				+0.7
2,267,736	-				+0.1
2,267,774	+				+0.6
2,267,774	+				-0.4
2,267,874	+				-0.8
2,267,874	+				-2.6
2,267,875	-				-1.9
2,267,875	-				-2.9
2,267,875	-				-2.1
2,267,927	+	yajR	MCAODC_27610	0.12	-1.4
2,267,928	-	yajR	MCAODC_27610	0.12	-2.4
2,267,931	+	yajR	MCAODC_27610	0.12	+2.4
2,267,932	-	yajR	MCAODC_27610	0.12	-1.4
2,267,932	-	yajR	MCAODC_27610	0.12	-0.6
2,267,932	-	yajR	MCAODC_27610	0.12	-2.0
2,268,001	+	yajR	MCAODC_27610	0.17	-1.6
2,268,001	+	yajR	MCAODC_27610	0.17	+0.3
2,268,075	-	yajR	MCAODC_27610	0.23	-0.2
2,268,075	-	yajR	MCAODC_27610	0.23	-2.4
2,268,091	+	yajR	MCAODC_27610	0.24	-2.8
2,268,200	+	yajR	MCAODC_27610	0.32	-2.1
2,268,200	+	yajR	MCAODC_27610	0.32	-2.1
2,268,200	+	yajR	MCAODC_27610	0.32	-1.7
2,268,201	-	yajR	MCAODC_27610	0.32	-3.7
2,268,201	-	yajR	MCAODC_27610	0.32	-3.1
2,268,279	-	yajR	MCAODC_27610	0.38	-0.1
2,268,329	+	yajR	MCAODC_27610	0.41	-2.2
2,268,330	-	yajR	MCAODC_27610	0.42	+1.4
2,268,330	-	yajR	MCAODC_27610	0.42	+0.8
2,268,330	-	yajR	MCAODC_27610	0.42	-0.0
2,268,340	+	yajR	MCAODC_27610	0.42	+0.5
2,268,340	+	yajR	MCAODC_27610	0.42	+0.4
2,268,340	+	yajR	MCAODC_27610	0.42	-3.2
2,268,340	+	yajR	MCAODC_27610	0.42	-0.1
2,268,344	+	yajR	MCAODC_27610	0.43	-3.2
2,268,344	+	yajR	MCAODC_27610	0.43	+0.3
2,268,344	+	yajR	MCAODC_27610	0.43	+0.3
2,268,345	-	yajR	MCAODC_27610	0.43	-2.8
2,268,425	+	yajR	MCAODC_27610	0.48	+1.8
2,268,425	+	yajR	MCAODC_27610	0.48	-0.4
2,268,425	+	yajR	MCAODC_27610	0.48	-4.1
2,268,425	+	yajR	MCAODC_27610	0.48	+0.4
2,268,426	-	yajR	MCAODC_27610	0.49	-1.1
2,268,426	-	yajR	MCAODC_27610	0.49	+1.3
2,268,426	-	yajR	MCAODC_27610	0.49	-1.5
2,268,438	-	yajR	MCAODC_27610	0.49	-2.9
2,268,519	+	yajR	MCAODC_27610	0.55	-3.5
2,268,536	-	yajR	MCAODC_27610	0.57	-2.2
2,268,566	+	yajR	MCAODC_27610	0.59	-0.1
2,268,570	+	yajR	MCAODC_27610	0.59	-2.9
2,268,570	+	yajR	MCAODC_27610	0.59	-1.4
2,268,571	-	yajR	MCAODC_27610	0.59	-1.2
2,268,571	-	yajR	MCAODC_27610	0.59	+0.7
2,268,571	-	yajR	MCAODC_27610	0.59	-2.3
2,268,571	-	yajR	MCAODC_27610	0.59	-0.8
2,268,571	-	yajR	MCAODC_27610	0.59	-4.2
2,268,582	-	yajR	MCAODC_27610	0.60	+0.0