Strain Fitness in Escherichia coli ECRC101 around MCAODC_26485

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,013,235	+	gltJ	MCAODC_26475	0.64	-3.8
2,013,239	+	gltJ	MCAODC_26475	0.64	+1.0
2,013,239	+	gltJ	MCAODC_26475	0.64	+1.9
2,013,249	+	gltJ	MCAODC_26475	0.65	+0.3
2,013,342	+	gltJ	MCAODC_26475	0.78	-2.8
2,013,342	+	gltJ	MCAODC_26475	0.78	+3.3
2,013,400	-	gltJ	MCAODC_26475	0.86	-2.2
2,013,408	+	gltJ	MCAODC_26475	0.87	+0.2
2,013,408	+	gltJ	MCAODC_26475	0.87	+0.9
2,013,409	-	gltJ	MCAODC_26475	0.87	-2.9
2,013,418	+	gltJ	MCAODC_26475	0.88	-0.6
2,013,418	+	gltJ	MCAODC_26475	0.88	-0.8
2,013,418	+	gltJ	MCAODC_26475	0.88	+0.8
2,013,418	+	gltJ	MCAODC_26475	0.88	+0.8
2,013,418	+	gltJ	MCAODC_26475	0.88	-0.1
2,013,418	+	gltJ	MCAODC_26475	0.88	-3.5
2,013,419	-	gltJ	MCAODC_26475	0.88	-1.0
2,013,419	-	gltJ	MCAODC_26475	0.88	+0.9
2,013,419	-	gltJ	MCAODC_26475	0.88	+0.4
2,013,419	-	gltJ	MCAODC_26475	0.88	-0.4
2,013,419	-	gltJ	MCAODC_26475	0.88	-0.4
2,013,419	-	gltJ	MCAODC_26475	0.88	-0.8
2,013,426	+	gltJ	MCAODC_26475	0.89	-0.8
2,013,427	-	gltJ	MCAODC_26475	0.89	+0.7
2,013,438	+				-0.5
2,013,439	-				-4.2
2,013,502	+				+0.9
2,013,502	+				-2.1
2,013,502	+				+0.6
2,013,547	-				-1.3
2,013,547	-				+1.0
2,013,679	-	gltK	MCAODC_26480	0.26	-0.6
2,013,679	-	gltK	MCAODC_26480	0.26	-1.9
2,013,689	-	gltK	MCAODC_26480	0.27	+1.4
2,013,706	+	gltK	MCAODC_26480	0.30	+1.0
2,013,706	+	gltK	MCAODC_26480	0.30	-3.2
2,013,869	+	gltK	MCAODC_26480	0.54	+0.8
2,013,938	+	gltK	MCAODC_26480	0.64	+1.2
2,013,939	-	gltK	MCAODC_26480	0.64	-0.1
2,013,994	+	gltK	MCAODC_26480	0.73	-1.4
2,013,995	-	gltK	MCAODC_26480	0.73	+0.2
2,014,020	+	gltK	MCAODC_26480	0.76	-1.0
2,014,020	+	gltK	MCAODC_26480	0.76	-0.9
2,014,020	+	gltK	MCAODC_26480	0.76	+0.3
2,014,020	+	gltK	MCAODC_26480	0.76	-0.9
2,014,021	-	gltK	MCAODC_26480	0.77	-1.1
2,014,027	+	gltK	MCAODC_26480	0.77	+1.8
2,014,363	+	gltL	MCAODC_26485	0.25	-2.0
2,014,422	+	gltL	MCAODC_26485	0.34	-0.6
2,014,423	-	gltL	MCAODC_26485	0.34	-0.1
2,014,633	+	gltL	MCAODC_26485	0.63	+1.3
2,014,634	-	gltL	MCAODC_26485	0.63	-1.0
2,014,634	-	gltL	MCAODC_26485	0.63	-1.5
2,014,642	+	gltL	MCAODC_26485	0.64	+0.9
2,014,677	+	gltL	MCAODC_26485	0.69	-0.3
2,014,678	-	gltL	MCAODC_26485	0.69	-1.0
2,014,701	+	gltL	MCAODC_26485	0.72	+0.4
2,014,702	-	gltL	MCAODC_26485	0.72	+0.7
2,014,702	-	gltL	MCAODC_26485	0.72	-1.0
2,014,802	-	gltL	MCAODC_26485	0.86	-0.5
2,014,963	+				-1.7
2,014,970	+				-2.4
2,014,970	+				+0.3
2,014,971	-				-0.6
2,015,077	-				+0.7
2,015,077	-				-3.4
2,015,120	-	rihA	MCAODC_26490	0.11	-1.6
2,015,120	-	rihA	MCAODC_26490	0.11	+0.7
2,015,173	+	rihA	MCAODC_26490	0.16	-2.4
2,015,174	-	rihA	MCAODC_26490	0.16	+0.6
2,015,189	-	rihA	MCAODC_26490	0.18	+0.2
2,015,327	-	rihA	MCAODC_26490	0.33	-3.2
2,015,404	+	rihA	MCAODC_26490	0.41	+0.2
2,015,404	+	rihA	MCAODC_26490	0.41	+0.8
2,015,444	-	rihA	MCAODC_26490	0.45	+2.0
2,015,492	-	rihA	MCAODC_26490	0.50	+1.8
2,015,515	+	rihA	MCAODC_26490	0.53	-0.5
2,015,522	+	rihA	MCAODC_26490	0.54	-1.1
2,015,523	-	rihA	MCAODC_26490	0.54	+0.6
2,015,523	-	rihA	MCAODC_26490	0.54	-0.4
2,015,523	-	rihA	MCAODC_26490	0.54	+1.4
2,015,701	+	rihA	MCAODC_26490	0.73	-1.3
2,015,701	+	rihA	MCAODC_26490	0.73	-3.2
2,015,701	+	rihA	MCAODC_26490	0.73	-0.7
2,015,737	-	rihA	MCAODC_26490	0.76	+1.4
2,015,737	-	rihA	MCAODC_26490	0.76	-3.7
2,015,782	+	rihA	MCAODC_26490	0.81	+1.9
2,015,825	+	rihA	MCAODC_26490	0.86	+0.4
2,015,826	-	rihA	MCAODC_26490	0.86	-2.8
2,015,889	+				-2.3
2,015,889	+				+2.3