Strain Fitness in Escherichia coli ECRC101 around MCAODC_16100

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
108,364	+	dbpA	MCAODC_16095	0.51	+0.4
108,365	-	dbpA	MCAODC_16095	0.51	-0.6
108,634	+	dbpA	MCAODC_16095	0.71	-0.1
108,635	-	dbpA	MCAODC_16095	0.71	-3.0
108,770	+	dbpA	MCAODC_16095	0.81	+0.0
108,773	+	dbpA	MCAODC_16095	0.81	+0.9
108,856	+	dbpA	MCAODC_16095	0.87	+0.2
108,859	+	dbpA	MCAODC_16095	0.87	-0.6
109,105	+				-1.3
109,125	-				+0.8
109,474	+	ttcA	MCAODC_16100	0.34	-1.8
109,528	-	ttcA	MCAODC_16100	0.39	+0.2
109,586	-	ttcA	MCAODC_16100	0.46	-0.9
109,586	-	ttcA	MCAODC_16100	0.46	-0.4
109,586	-	ttcA	MCAODC_16100	0.46	+1.2
109,613	-	ttcA	MCAODC_16100	0.48	-1.3
109,617	-	ttcA	MCAODC_16100	0.49	-2.8
109,774	-	ttcA	MCAODC_16100	0.66	+0.0
109,938	+	ttcA	MCAODC_16100	0.83	-0.5
109,938	+	ttcA	MCAODC_16100	0.83	-1.0
109,939	-	ttcA	MCAODC_16100	0.83	-0.0
109,939	-	ttcA	MCAODC_16100	0.83	+0.6
109,939	-	ttcA	MCAODC_16100	0.83	-0.4
109,939	-	ttcA	MCAODC_16100	0.83	-1.8
110,058	+				+1.8
110,098	-				+0.1
110,160	+				-2.1
110,190	+				+0.6
110,191	-				-3.4
110,191	-				+0.3
110,191	-				+1.2
110,310	+				-3.5
110,379	-	uspF	MCAODC_16105	0.25	-1.9
110,379	-	uspF	MCAODC_16105	0.25	+0.3
110,566	+	uspF	MCAODC_16105	0.68	-2.0
110,566	+	uspF	MCAODC_16105	0.68	+1.0
110,567	-	uspF	MCAODC_16105	0.68	-4.1
110,567	-	uspF	MCAODC_16105	0.68	-1.6
110,705	+				+1.0
110,788	+				-3.1
110,788	+				-0.4
110,867	+				-2.6
110,878	+				+2.6
110,878	+				+1.0
110,907	+				+0.3
110,952	+		MCAODC_16110	0.14	+3.0
110,979	+		MCAODC_16110	0.17	+1.7