Strain Fitness in Escherichia coli ECRC101 around MCAODC_14195

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,786,125	+	yfaA	MCAODC_14190	0.44	+0.4
2,786,146	+	yfaA	MCAODC_14190	0.45	+2.4
2,786,147	-	yfaA	MCAODC_14190	0.45	+0.5
2,786,191	+	yfaA	MCAODC_14190	0.48	-2.7
2,786,249	+	yfaA	MCAODC_14190	0.52	-2.6
2,786,249	+	yfaA	MCAODC_14190	0.52	+0.7
2,786,249	+	yfaA	MCAODC_14190	0.52	+0.8
2,786,249	+	yfaA	MCAODC_14190	0.52	+1.7
2,786,249	+	yfaA	MCAODC_14190	0.52	-0.8
2,786,250	-	yfaA	MCAODC_14190	0.52	-3.6
2,786,477	+	yfaA	MCAODC_14190	0.67	-0.3
2,786,478	-	yfaA	MCAODC_14190	0.67	+0.1
2,786,621	-	yfaA	MCAODC_14190	0.76	-2.0
2,786,621	-	yfaA	MCAODC_14190	0.76	+1.0
2,786,632	-	yfaA	MCAODC_14190	0.77	-0.9
2,786,723	+	yfaA	MCAODC_14190	0.83	+1.1
2,786,749	+	yfaA	MCAODC_14190	0.84	-2.2
2,786,749	+	yfaA	MCAODC_14190	0.84	-0.7
2,786,749	+	yfaA	MCAODC_14190	0.84	-0.9
2,786,750	-	yfaA	MCAODC_14190	0.84	+0.9
2,786,750	-	yfaA	MCAODC_14190	0.84	+0.8
2,786,750	-	yfaA	MCAODC_14190	0.84	+1.3
2,786,778	+	yfaA	MCAODC_14190	0.86	-0.2
2,786,780	+	yfaA	MCAODC_14190	0.86	-2.4
2,786,781	-	yfaA	MCAODC_14190	0.86	+0.9
2,786,879	-				-1.6
2,786,879	-				-0.4
2,786,881	+				-0.2
2,786,881	+				+3.4
2,786,919	+				+1.7
2,786,975	-				-0.7
2,787,093	+	yfaT	MCAODC_14195	0.17	+2.6
2,787,141	-	yfaT	MCAODC_14195	0.24	-0.2
2,787,141	-	yfaT	MCAODC_14195	0.24	-0.2
2,787,228	+	yfaT	MCAODC_14195	0.38	-1.6
2,787,239	+	yfaT	MCAODC_14195	0.40	-2.0
2,787,324	-	yfaT	MCAODC_14195	0.54	+0.5
2,787,350	+	yfaT	MCAODC_14195	0.58	+0.6
2,787,351	-	yfaT	MCAODC_14195	0.58	-1.0
2,787,378	+	yfaT	MCAODC_14195	0.62	-0.2
2,787,435	+	yfaT	MCAODC_14195	0.71	-2.7
2,787,436	-	yfaT	MCAODC_14195	0.71	-0.7
2,787,436	-	yfaT	MCAODC_14195	0.71	+0.0
2,787,436	-	yfaT	MCAODC_14195	0.71	+1.3
2,787,456	-	yfaT	MCAODC_14195	0.75	-2.8
2,787,456	-	yfaT	MCAODC_14195	0.75	+1.9
2,787,465	-	yfaT	MCAODC_14195	0.76	+0.2
2,787,526	+	yfaT	MCAODC_14195	0.86	-3.5
2,787,526	+	yfaT	MCAODC_14195	0.86	+0.4
2,787,587	+				+0.2
2,787,612	-				-3.1
2,787,685	+				+1.4
2,787,686	-				+3.5
2,787,735	+				-0.2
2,787,838	-				-1.2
2,787,927	+				-0.2
2,787,927	+				+0.9
2,787,928	-				+2.1
2,787,949	-				-0.6
2,787,984	+				+0.6
2,787,984	+				+0.5
2,787,985	-				-0.6
2,788,035	-				-2.2
2,788,057	-				+1.3
2,788,057	-				+0.5
2,788,070	-				+0.8
2,788,073	+				+1.3
2,788,073	+				-1.1
2,788,073	+				+0.0
2,788,074	-				-0.3
2,788,074	-				+0.3
2,788,136	+				+2.0
2,788,137	-				-3.4
2,788,225	+	yfaS	MCAODC_14200	0.11	-0.0
2,788,225	+	yfaS	MCAODC_14200	0.11	+2.3
2,788,225	+	yfaS	MCAODC_14200	0.11	-2.7
2,788,226	-	yfaS	MCAODC_14200	0.12	-4.4
2,788,226	-	yfaS	MCAODC_14200	0.12	-0.5
2,788,226	-	yfaS	MCAODC_14200	0.12	+1.4
2,788,226	-	yfaS	MCAODC_14200	0.12	+1.8
2,788,228	-	yfaS	MCAODC_14200	0.12	+0.6
2,788,329	+	yfaS	MCAODC_14200	0.14	-0.3
2,788,462	-	yfaS	MCAODC_14200	0.17	-1.4
2,788,472	+	yfaS	MCAODC_14200	0.17	+1.8
2,788,479	+	yfaS	MCAODC_14200	0.17	+3.3
2,788,479	+	yfaS	MCAODC_14200	0.17	+0.5
2,788,480	-	yfaS	MCAODC_14200	0.17	-0.9
2,788,480	-	yfaS	MCAODC_14200	0.17	+0.2
2,788,480	-	yfaS	MCAODC_14200	0.17	-3.8
2,788,480	-	yfaS	MCAODC_14200	0.17	-0.7
2,788,481	+	yfaS	MCAODC_14200	0.17	-0.7
2,788,498	+	yfaS	MCAODC_14200	0.18	-0.1
2,788,498	+	yfaS	MCAODC_14200	0.18	-1.9
2,788,499	-	yfaS	MCAODC_14200	0.18	-2.0
2,788,499	-	yfaS	MCAODC_14200	0.18	-0.3
2,788,499	-	yfaS	MCAODC_14200	0.18	-0.1
2,788,552	+	yfaS	MCAODC_14200	0.19	-2.0
2,788,553	-	yfaS	MCAODC_14200	0.19	+0.1
2,788,567	+	yfaS	MCAODC_14200	0.19	-2.4
2,788,568	-	yfaS	MCAODC_14200	0.19	+2.2
2,788,582	+	yfaS	MCAODC_14200	0.20	+1.0
2,788,583	-	yfaS	MCAODC_14200	0.20	+1.0
2,788,585	-	yfaS	MCAODC_14200	0.20	+0.7
2,788,590	+	yfaS	MCAODC_14200	0.20	-1.3
2,788,607	-	yfaS	MCAODC_14200	0.20	-1.7