Strain Fitness in Escherichia coli ECRC101 around MCAODC_13930

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,725,543	+	nuoI	MCAODC_13915	0.82	-2.7
2,725,544	-	nuoI	MCAODC_13915	0.82	-1.7
2,725,544	-	nuoI	MCAODC_13915	0.82	-4.0
2,725,565	-	nuoI	MCAODC_13915	0.86	-0.2
2,725,565	-	nuoI	MCAODC_13915	0.86	-3.0
2,725,615	+				-2.4
2,725,691	+				-1.8
2,725,692	-				-3.1
2,725,692	-				-0.7
2,725,744	+	nuoJ	MCAODC_13920	0.16	-1.9
2,725,799	-	nuoJ	MCAODC_13920	0.26	-2.1
2,725,799	-	nuoJ	MCAODC_13920	0.26	-5.3
2,725,821	+	nuoJ	MCAODC_13920	0.30	-2.9
2,725,828	+	nuoJ	MCAODC_13920	0.31	-2.2
2,725,842	+	nuoJ	MCAODC_13920	0.34	-2.1
2,726,032	-	nuoJ	MCAODC_13920	0.68	-2.2
2,726,032	-	nuoJ	MCAODC_13920	0.68	-2.6
2,726,046	+	nuoJ	MCAODC_13920	0.71	-3.0
2,726,067	-	nuoJ	MCAODC_13920	0.74	-2.0
2,726,088	+	nuoJ	MCAODC_13920	0.78	-3.0
2,726,088	+	nuoJ	MCAODC_13920	0.78	-1.2
2,726,088	+	nuoJ	MCAODC_13920	0.78	-0.5
2,726,089	-	nuoJ	MCAODC_13920	0.78	-1.5
2,726,216	-				-1.4
2,726,295	-	nuoK	MCAODC_13925	0.30	-3.2
2,726,322	-	nuoK	MCAODC_13925	0.39	-1.8
2,726,388	+	nuoK	MCAODC_13925	0.60	-2.7
2,726,389	-	nuoK	MCAODC_13925	0.61	-1.5
2,726,389	-	nuoK	MCAODC_13925	0.61	+0.1
2,726,488	+				-1.7
2,726,645	-				-0.7
2,726,682	-				-2.4
2,726,722	+	nuoL	MCAODC_13930	0.12	-3.2
2,726,722	+	nuoL	MCAODC_13930	0.12	-5.0
2,726,797	+	nuoL	MCAODC_13930	0.16	-0.9
2,726,807	+	nuoL	MCAODC_13930	0.16	-0.6
2,726,807	+	nuoL	MCAODC_13930	0.16	-2.6
2,726,808	-	nuoL	MCAODC_13930	0.17	-2.7
2,726,808	-	nuoL	MCAODC_13930	0.17	-0.5
2,726,808	-	nuoL	MCAODC_13930	0.17	-3.3
2,726,808	-	nuoL	MCAODC_13930	0.17	-2.4
2,726,808	-	nuoL	MCAODC_13930	0.17	-3.3
2,726,808	-	nuoL	MCAODC_13930	0.17	-0.9
2,726,819	+	nuoL	MCAODC_13930	0.17	-1.1
2,726,819	+	nuoL	MCAODC_13930	0.17	+0.5
2,726,820	-	nuoL	MCAODC_13930	0.17	-1.5
2,726,820	-	nuoL	MCAODC_13930	0.17	-3.9
2,726,821	+	nuoL	MCAODC_13930	0.17	-1.5
2,726,821	+	nuoL	MCAODC_13930	0.17	-2.1
2,726,822	-	nuoL	MCAODC_13930	0.17	-4.1
2,726,841	-	nuoL	MCAODC_13930	0.18	-3.3
2,726,859	-	nuoL	MCAODC_13930	0.19	-4.0
2,726,921	+	nuoL	MCAODC_13930	0.23	-2.4
2,726,922	-	nuoL	MCAODC_13930	0.23	-3.3
2,726,955	-	nuoL	MCAODC_13930	0.24	-1.7
2,726,972	+	nuoL	MCAODC_13930	0.25	-0.9
2,727,139	+	nuoL	MCAODC_13930	0.34	-2.7
2,727,140	-	nuoL	MCAODC_13930	0.35	-1.4
2,727,371	-	nuoL	MCAODC_13930	0.47	-3.0
2,727,371	-	nuoL	MCAODC_13930	0.47	-1.8
2,727,432	-	nuoL	MCAODC_13930	0.50	-3.1
2,727,437	-	nuoL	MCAODC_13930	0.51	-2.3
2,727,437	-	nuoL	MCAODC_13930	0.51	-2.5
2,727,455	+	nuoL	MCAODC_13930	0.52	-1.1
2,727,456	-	nuoL	MCAODC_13930	0.52	-0.2
2,727,526	+	nuoL	MCAODC_13930	0.55	-2.0
2,727,610	+	nuoL	MCAODC_13930	0.60	-2.0
2,727,616	+	nuoL	MCAODC_13930	0.60	-2.4
2,727,736	+	nuoL	MCAODC_13930	0.67	-2.7
2,727,737	-	nuoL	MCAODC_13930	0.67	-1.7
2,727,786	-	nuoL	MCAODC_13930	0.70	-1.5
2,727,856	-	nuoL	MCAODC_13930	0.73	-0.5
2,727,918	+	nuoL	MCAODC_13930	0.77	-2.6
2,728,045	+	nuoL	MCAODC_13930	0.84	+1.1
2,728,051	+	nuoL	MCAODC_13930	0.84	-3.0
2,728,109	+	nuoL	MCAODC_13930	0.87	-2.6
2,728,110	-	nuoL	MCAODC_13930	0.87	-2.2
2,728,257	+				-0.5
2,728,272	-				-1.1
2,728,272	-				-4.0
2,728,283	+				-3.6
2,728,283	+				-2.5
2,728,283	+				-2.4
2,728,283	+				-3.9
2,728,363	+				-3.1
2,728,364	-				-2.5
2,728,364	-				-1.2
2,728,365	+				-2.8
2,728,365	+				+0.7
2,728,366	-				-1.6
2,728,366	-				-1.5
2,728,393	+				-1.1
2,728,393	+				-2.2
2,728,394	-				-1.8
2,728,394	-				+0.1
2,728,407	-				-2.4
2,728,410	+				-1.8
2,728,410	+				+1.3
2,728,425	+				-1.1
2,728,482	+				-2.7
2,728,486	+				-1.4
2,728,486	+				+0.1
2,728,486	+				-2.2
2,728,486	+				-0.9
2,728,486	+				-2.2
2,728,487	-				-1.8
2,728,487	-				-2.0
2,728,490	+				-2.9
2,728,490	+				-2.1
2,728,491	-				-1.4
2,728,537	+				-1.8
2,728,538	-				-1.8
2,728,556	+				-3.0
2,728,556	+				-3.8
2,728,556	+				-4.1
2,728,559	-				-1.5
2,728,567	+				-2.4
2,728,568	-				-2.0
2,728,568	-				-1.6
2,728,568	-				-2.4
2,728,568	-				-3.3
2,728,571	+				-2.6
2,728,571	+				-1.6
2,728,572	-				-3.1
2,728,572	-				-2.0
2,728,575	+				-2.4
2,728,575	+				-2.8
2,728,575	+				-2.4
2,728,575	+				+1.5
2,728,576	-				-2.7
2,728,576	-				-1.8
2,728,580	+				-0.5
2,728,581	-				-3.2
2,728,595	+				-4.4
2,728,595	+				-1.6
2,728,598	+				-2.2
2,728,880	+	nuoM	MCAODC_13935	0.20	-0.2
2,729,105	-	nuoM	MCAODC_13935	0.35	-0.5
2,729,164	+	nuoM	MCAODC_13935	0.38	-2.1
2,729,165	-	nuoM	MCAODC_13935	0.38	-1.4
2,729,195	-	nuoM	MCAODC_13935	0.40	-0.9
2,729,237	-	nuoM	MCAODC_13935	0.43	-0.3