Strain Fitness in Escherichia coli ECRC101 around MCAODC_07585

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,542,420	-	yhgE	MCAODC_07580	0.50	+1.3
1,542,447	+	yhgE	MCAODC_07580	0.51	-0.0
1,542,447	+	yhgE	MCAODC_07580	0.51	-0.1
1,542,448	-	yhgE	MCAODC_07580	0.51	+0.8
1,542,448	-	yhgE	MCAODC_07580	0.51	-1.2
1,542,492	+	yhgE	MCAODC_07580	0.54	+1.3
1,542,541	+	yhgE	MCAODC_07580	0.57	+0.6
1,542,585	-	yhgE	MCAODC_07580	0.59	-1.5
1,542,649	+	yhgE	MCAODC_07580	0.63	+1.1
1,542,650	-	yhgE	MCAODC_07580	0.63	-0.4
1,542,665	+	yhgE	MCAODC_07580	0.64	+1.1
1,542,666	-	yhgE	MCAODC_07580	0.64	+1.8
1,542,666	-	yhgE	MCAODC_07580	0.64	-1.0
1,542,686	+	yhgE	MCAODC_07580	0.65	+0.0
1,542,687	-	yhgE	MCAODC_07580	0.65	-0.5
1,542,687	-	yhgE	MCAODC_07580	0.65	+1.1
1,542,695	+	yhgE	MCAODC_07580	0.66	+0.3
1,542,696	-	yhgE	MCAODC_07580	0.66	+0.5
1,542,696	-	yhgE	MCAODC_07580	0.66	+0.9
1,542,710	+	yhgE	MCAODC_07580	0.67	+0.6
1,542,711	-	yhgE	MCAODC_07580	0.67	-0.8
1,542,711	-	yhgE	MCAODC_07580	0.67	-0.7
1,542,711	-	yhgE	MCAODC_07580	0.67	-0.8
1,542,751	+	yhgE	MCAODC_07580	0.69	+1.1
1,542,752	-	yhgE	MCAODC_07580	0.69	+0.1
1,542,752	-	yhgE	MCAODC_07580	0.69	-0.2
1,542,755	+	yhgE	MCAODC_07580	0.69	+1.4
1,542,755	+	yhgE	MCAODC_07580	0.69	+0.4
1,542,755	+	yhgE	MCAODC_07580	0.69	-2.3
1,542,755	+	yhgE	MCAODC_07580	0.69	-1.2
1,542,755	+	yhgE	MCAODC_07580	0.69	-0.1
1,542,755	+	yhgE	MCAODC_07580	0.69	+1.1
1,542,755	+	yhgE	MCAODC_07580	0.69	-0.6
1,542,755	+	yhgE	MCAODC_07580	0.69	+0.5
1,542,755	+	yhgE	MCAODC_07580	0.69	+1.7
1,542,756	-	yhgE	MCAODC_07580	0.69	+1.2
1,542,756	-	yhgE	MCAODC_07580	0.69	-4.0
1,542,756	-	yhgE	MCAODC_07580	0.69	+0.7
1,542,756	-	yhgE	MCAODC_07580	0.69	-0.6
1,542,756	-	yhgE	MCAODC_07580	0.69	-2.3
1,542,759	+	yhgE	MCAODC_07580	0.69	-3.8
1,542,759	+	yhgE	MCAODC_07580	0.69	-0.6
1,542,759	+	yhgE	MCAODC_07580	0.69	+0.4
1,542,760	-	yhgE	MCAODC_07580	0.69	+1.8
1,542,760	-	yhgE	MCAODC_07580	0.69	+1.2
1,542,760	-	yhgE	MCAODC_07580	0.69	-2.1
1,542,760	-	yhgE	MCAODC_07580	0.69	+1.0
1,542,760	-	yhgE	MCAODC_07580	0.69	+0.8
1,542,826	-	yhgE	MCAODC_07580	0.73	-0.9
1,542,827	+	yhgE	MCAODC_07580	0.73	+0.2
1,542,856	+	yhgE	MCAODC_07580	0.75	-1.0
1,542,856	+	yhgE	MCAODC_07580	0.75	-2.9
1,542,857	-	yhgE	MCAODC_07580	0.75	-1.4
1,542,857	-	yhgE	MCAODC_07580	0.75	-0.7
1,542,857	-	yhgE	MCAODC_07580	0.75	-0.7
1,542,868	+	yhgE	MCAODC_07580	0.76	-3.7
1,542,910	+	yhgE	MCAODC_07580	0.78	+0.6
1,542,911	-	yhgE	MCAODC_07580	0.78	+1.2
1,542,913	+	yhgE	MCAODC_07580	0.78	+2.9
1,542,929	-	yhgE	MCAODC_07580	0.79	+1.5
1,542,976	+	yhgE	MCAODC_07580	0.82	+1.5
1,542,976	+	yhgE	MCAODC_07580	0.82	+1.8
1,542,990	+	yhgE	MCAODC_07580	0.83	-2.2
1,542,990	+	yhgE	MCAODC_07580	0.83	+2.3
1,542,991	-	yhgE	MCAODC_07580	0.83	+0.8
1,542,992	+	yhgE	MCAODC_07580	0.83	+0.6
1,543,007	+	yhgE	MCAODC_07580	0.84	-3.4
1,543,007	+	yhgE	MCAODC_07580	0.84	-0.7
1,543,049	+	yhgE	MCAODC_07580	0.86	-0.1
1,543,099	-	yhgE	MCAODC_07580	0.89	-0.9
1,543,099	-	yhgE	MCAODC_07580	0.89	+0.6
1,543,099	-	yhgE	MCAODC_07580	0.89	+0.9
1,543,107	+	yhgE	MCAODC_07580	0.90	-0.5
1,543,107	+	yhgE	MCAODC_07580	0.90	-2.0
1,543,145	+				-0.3
1,543,146	-				+0.3
1,543,146	-				+0.1
1,543,156	+				+0.7
1,543,170	-				+2.0
1,543,171	+				-0.6
1,543,171	+				-0.5
1,543,171	+				-1.2
1,543,172	-				-0.4
1,543,172	-				-0.7
1,543,172	-				-3.4
1,543,226	+				-2.6
1,543,247	-				-0.1
1,543,303	+				-2.7
1,543,303	+				-0.2
1,543,304	-				+0.6
1,543,304	-				+1.2
1,543,304	-				-2.5
1,543,304	-				-0.9
1,543,304	-				+1.7
1,543,304	-				-1.2
1,543,306	+				+1.8
1,543,307	-				+0.7
1,543,313	-				-0.3
1,543,313	-				+0.7
1,543,343	+				-3.0
1,543,343	+				+0.4
1,543,343	+				-2.4
1,543,344	-				-1.2
1,543,344	-				-1.8
1,543,344	-				-0.0
1,543,350	+				-0.2
1,543,419	+				+0.5
1,543,419	+				-0.6
1,543,420	-				+1.1
1,543,420	-				-2.5
1,543,420	-				+2.3
1,543,434	+				+0.2
1,543,590	+	hslO	MCAODC_07585	0.27	-0.1
1,543,707	-	hslO	MCAODC_07585	0.41	+0.2
1,543,707	-	hslO	MCAODC_07585	0.41	-0.2
1,543,707	-	hslO	MCAODC_07585	0.41	-2.1
1,543,720	+	hslO	MCAODC_07585	0.42	-1.2
1,543,745	+	hslO	MCAODC_07585	0.45	+1.6
1,543,746	-	hslO	MCAODC_07585	0.45	-2.8
1,543,796	-	hslO	MCAODC_07585	0.51	-0.7
1,543,800	+	hslO	MCAODC_07585	0.51	+0.1
1,543,800	+	hslO	MCAODC_07585	0.51	-1.6
1,543,826	-	hslO	MCAODC_07585	0.54	-0.8
1,543,893	+	hslO	MCAODC_07585	0.62	-3.3
1,543,893	+	hslO	MCAODC_07585	0.62	+0.7
1,543,893	+	hslO	MCAODC_07585	0.62	-4.1
1,544,199	+				-1.5
1,544,199	+				+0.3
1,544,199	+				+2.1
1,544,227	+				-2.5
1,544,227	+				-1.6
1,544,228	-				-3.3
1,544,253	+				+1.6
1,544,253	+				+0.4
1,544,253	+				+0.4
1,544,254	-				-0.9
1,544,334	-	hslR	MCAODC_07590	0.20	+1.7
1,544,341	+	hslR	MCAODC_07590	0.22	+0.8
1,544,341	+	hslR	MCAODC_07590	0.22	+1.1
1,544,342	-	hslR	MCAODC_07590	0.22	+1.6
1,544,342	-	hslR	MCAODC_07590	0.22	-0.4
1,544,348	-	hslR	MCAODC_07590	0.24	-1.0
1,544,541	+	hslR	MCAODC_07590	0.72	+1.1
1,544,541	+	hslR	MCAODC_07590	0.72	-0.7
1,544,541	+	hslR	MCAODC_07590	0.72	-3.0
1,544,542	-	hslR	MCAODC_07590	0.72	+1.0
1,544,617	+				+1.5
1,544,671	-				+0.6
1,544,671	-				+0.5
1,544,719	+				+0.1
1,544,719	+				+0.7
1,544,719	+				+1.6
1,544,719	+				+1.0
1,544,751	-	yrfG	MCAODC_07595	0.13	-0.4
1,544,775	-	yrfG	MCAODC_07595	0.17	+1.2
1,544,819	+	yrfG	MCAODC_07595	0.23	-0.9
1,544,917	-	yrfG	MCAODC_07595	0.38	-0.0
1,544,919	+	yrfG	MCAODC_07595	0.38	-0.4
1,544,920	-	yrfG	MCAODC_07595	0.38	+0.7
1,544,920	-	yrfG	MCAODC_07595	0.38	+0.5
1,545,055	-	yrfG	MCAODC_07595	0.58	-1.2
1,545,092	+	yrfG	MCAODC_07595	0.64	+1.2
1,545,119	-	yrfG	MCAODC_07595	0.68	+0.8
1,545,131	-	yrfG	MCAODC_07595	0.70	+0.3
1,545,143	+	yrfG	MCAODC_07595	0.72	+1.6
1,545,144	-	yrfG	MCAODC_07595	0.72	+0.7
1,545,144	-	yrfG	MCAODC_07595	0.72	-0.8
1,545,144	-	yrfG	MCAODC_07595	0.72	-0.7
1,545,144	-	yrfG	MCAODC_07595	0.72	-0.2
1,545,144	-	yrfG	MCAODC_07595	0.72	-0.3
1,545,144	-	yrfG	MCAODC_07595	0.72	+1.5
1,545,144	-	yrfG	MCAODC_07595	0.72	-2.5
1,545,144	-	yrfG	MCAODC_07595	0.72	+0.8
1,545,151	-	yrfG	MCAODC_07595	0.73	+1.2
1,545,151	-	yrfG	MCAODC_07595	0.73	+1.1
1,545,161	-	yrfG	MCAODC_07595	0.74	+1.0
1,545,173	+	yrfG	MCAODC_07595	0.76	-0.1
1,545,173	+	yrfG	MCAODC_07595	0.76	-0.1
1,545,174	-	yrfG	MCAODC_07595	0.76	+0.2
1,545,174	-	yrfG	MCAODC_07595	0.76	+2.9
1,545,174	-	yrfG	MCAODC_07595	0.76	-1.6
1,545,174	-	yrfG	MCAODC_07595	0.76	+1.7
1,545,175	+	yrfG	MCAODC_07595	0.76	-2.4
1,545,175	+	yrfG	MCAODC_07595	0.76	-0.3
1,545,175	+	yrfG	MCAODC_07595	0.76	+1.2
1,545,176	-	yrfG	MCAODC_07595	0.77	-0.6
1,545,176	-	yrfG	MCAODC_07595	0.77	-0.1
1,545,176	-	yrfG	MCAODC_07595	0.77	+1.2
1,545,176	-	yrfG	MCAODC_07595	0.77	+0.6
1,545,176	-	yrfG	MCAODC_07595	0.77	+1.4