Strain Fitness in Escherichia coli ECRC101 around MCAODC_06930

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,405,739	+				+1.5
1,405,889	+	rlmJ	MCAODC_06925	0.27	-0.2
1,405,890	-	rlmJ	MCAODC_06925	0.27	+0.5
1,405,890	-	rlmJ	MCAODC_06925	0.27	+1.6
1,405,927	+	rlmJ	MCAODC_06925	0.32	+0.4
1,405,927	+	rlmJ	MCAODC_06925	0.32	-0.4
1,405,927	+	rlmJ	MCAODC_06925	0.32	-0.9
1,405,927	+	rlmJ	MCAODC_06925	0.32	-1.5
1,405,927	+	rlmJ	MCAODC_06925	0.32	+0.0
1,405,928	-	rlmJ	MCAODC_06925	0.32	+0.8
1,405,928	-	rlmJ	MCAODC_06925	0.32	-3.8
1,405,928	-	rlmJ	MCAODC_06925	0.32	-1.3
1,405,928	-	rlmJ	MCAODC_06925	0.32	-1.6
1,405,928	-	rlmJ	MCAODC_06925	0.32	-0.0
1,405,951	+	rlmJ	MCAODC_06925	0.35	-3.3
1,406,182	-	rlmJ	MCAODC_06925	0.62	-0.2
1,406,213	-	rlmJ	MCAODC_06925	0.66	+0.7
1,406,216	-	rlmJ	MCAODC_06925	0.66	+0.5
1,406,216	-	rlmJ	MCAODC_06925	0.66	+0.1
1,406,247	+	rlmJ	MCAODC_06925	0.70	+1.4
1,406,248	-	rlmJ	MCAODC_06925	0.70	+0.4
1,406,260	+	rlmJ	MCAODC_06925	0.71	+1.0
1,406,261	-	rlmJ	MCAODC_06925	0.71	-0.2
1,406,261	-	rlmJ	MCAODC_06925	0.71	+1.8
1,406,300	+	rlmJ	MCAODC_06925	0.76	+1.3
1,406,301	-	rlmJ	MCAODC_06925	0.76	-0.0
1,406,301	-	rlmJ	MCAODC_06925	0.76	+1.3
1,406,331	-	rlmJ	MCAODC_06925	0.80	+4.4
1,406,352	+	rlmJ	MCAODC_06925	0.82	+0.2
1,406,402	+	rlmJ	MCAODC_06925	0.88	+0.9
1,406,402	+	rlmJ	MCAODC_06925	0.88	-0.5
1,406,445	-				-2.9
1,406,450	+				+0.1
1,406,450	+				-0.8
1,406,451	-				-1.9
1,406,451	-				+0.0
1,406,505	+				-0.6
1,406,520	-				-3.4
1,406,520	-				-0.0
1,406,569	+				-1.2
1,406,569	+				+0.7
1,406,569	+				-3.6
1,406,569	+				-3.4
1,406,570	-				+0.0
1,406,570	-				+0.5
1,406,570	-				+2.3
1,406,570	-				+0.2
1,406,571	+				-4.1
1,406,572	-				+0.8
1,406,624	+				+0.6
1,406,625	-				+0.7
1,406,631	-				+0.4
1,406,631	-				-2.1
1,406,631	-				-1.7
1,406,641	+				-1.0
1,406,641	+				+0.7
1,406,650	+				+0.2
1,406,650	+				+0.5
1,406,651	-				-3.2
1,406,655	-				-0.7
1,406,655	-				-0.2
1,406,655	-				+0.6
1,406,655	-				-1.2
1,406,687	+				+0.1
1,406,825	+				+0.2
1,406,842	+				-0.2
1,406,842	+				+1.6
1,406,843	-				+0.7
1,406,843	-				+0.2
1,406,938	-	prlC	MCAODC_06930	0.11	-2.4
1,406,990	-	prlC	MCAODC_06930	0.14	-2.6
1,406,990	-	prlC	MCAODC_06930	0.14	-2.8
1,407,022	+	prlC	MCAODC_06930	0.16	-2.8
1,407,023	-	prlC	MCAODC_06930	0.16	-0.4
1,407,023	-	prlC	MCAODC_06930	0.16	+1.2
1,407,023	-	prlC	MCAODC_06930	0.16	-1.0
1,407,023	-	prlC	MCAODC_06930	0.16	+0.8
1,407,024	+	prlC	MCAODC_06930	0.16	-1.0
1,407,024	+	prlC	MCAODC_06930	0.16	+1.5
1,407,058	+	prlC	MCAODC_06930	0.17	-0.4
1,407,199	+	prlC	MCAODC_06930	0.24	+0.5
1,407,200	-	prlC	MCAODC_06930	0.24	+0.6
1,407,331	+	prlC	MCAODC_06930	0.31	+1.2
1,407,358	+	prlC	MCAODC_06930	0.32	+0.1
1,407,358	+	prlC	MCAODC_06930	0.32	+0.8
1,407,358	+	prlC	MCAODC_06930	0.32	+0.2
1,407,358	+	prlC	MCAODC_06930	0.32	+0.6
1,407,359	-	prlC	MCAODC_06930	0.32	-0.2
1,407,359	-	prlC	MCAODC_06930	0.32	-1.8
1,407,359	-	prlC	MCAODC_06930	0.32	-2.5
1,407,377	-	prlC	MCAODC_06930	0.33	+0.4
1,407,409	+	prlC	MCAODC_06930	0.35	+0.6
1,407,409	+	prlC	MCAODC_06930	0.35	-1.2
1,407,410	-	prlC	MCAODC_06930	0.35	+1.3
1,407,410	-	prlC	MCAODC_06930	0.35	-2.4
1,407,410	-	prlC	MCAODC_06930	0.35	-1.2
1,407,410	-	prlC	MCAODC_06930	0.35	+0.2
1,407,419	-	prlC	MCAODC_06930	0.35	-0.6
1,407,456	+	prlC	MCAODC_06930	0.37	-0.5
1,407,471	+	prlC	MCAODC_06930	0.38	-1.2
1,407,471	+	prlC	MCAODC_06930	0.38	-0.9
1,407,471	+	prlC	MCAODC_06930	0.38	-0.0
1,407,471	+	prlC	MCAODC_06930	0.38	-0.5
1,407,535	+	prlC	MCAODC_06930	0.41	+0.6
1,407,536	-	prlC	MCAODC_06930	0.41	-0.8
1,407,712	+	prlC	MCAODC_06930	0.49	+1.3
1,407,712	+	prlC	MCAODC_06930	0.49	+1.2
1,407,712	+	prlC	MCAODC_06930	0.49	-2.3
1,407,713	-	prlC	MCAODC_06930	0.49	-0.1
1,407,739	+	prlC	MCAODC_06930	0.51	-4.4
1,407,740	-	prlC	MCAODC_06930	0.51	+0.6
1,407,740	-	prlC	MCAODC_06930	0.51	-2.0
1,407,770	-	prlC	MCAODC_06930	0.52	+1.9
1,407,812	+	prlC	MCAODC_06930	0.54	-3.2
1,407,824	-	prlC	MCAODC_06930	0.55	-1.9
1,407,847	-	prlC	MCAODC_06930	0.56	-0.3
1,407,847	-	prlC	MCAODC_06930	0.56	+1.8
1,407,892	+	prlC	MCAODC_06930	0.58	-1.0
1,407,892	+	prlC	MCAODC_06930	0.58	+0.5
1,407,892	+	prlC	MCAODC_06930	0.58	-3.1
1,407,892	+	prlC	MCAODC_06930	0.58	-0.1
1,407,893	-	prlC	MCAODC_06930	0.58	+1.4
1,407,893	-	prlC	MCAODC_06930	0.58	-2.4
1,407,925	+	prlC	MCAODC_06930	0.60	+0.9
1,407,926	-	prlC	MCAODC_06930	0.60	-1.0
1,407,937	+	prlC	MCAODC_06930	0.60	-2.7
1,407,938	-	prlC	MCAODC_06930	0.60	+0.2
1,407,938	-	prlC	MCAODC_06930	0.60	-3.1
1,407,996	+	prlC	MCAODC_06930	0.63	-0.7
1,408,031	-	prlC	MCAODC_06930	0.65	-0.6
1,408,041	+	prlC	MCAODC_06930	0.65	-1.1
1,408,134	+	prlC	MCAODC_06930	0.70	-1.7
1,408,134	+	prlC	MCAODC_06930	0.70	-0.3
1,408,134	+	prlC	MCAODC_06930	0.70	+0.1
1,408,135	-	prlC	MCAODC_06930	0.70	-1.2
1,408,135	-	prlC	MCAODC_06930	0.70	-0.7
1,408,135	-	prlC	MCAODC_06930	0.70	-2.8
1,408,135	-	prlC	MCAODC_06930	0.70	+0.8
1,408,215	+	prlC	MCAODC_06930	0.74	+1.6
1,408,254	+	prlC	MCAODC_06930	0.76	+1.2
1,408,255	-	prlC	MCAODC_06930	0.76	+1.7
1,408,328	-	prlC	MCAODC_06930	0.79	+0.1
1,408,345	-	prlC	MCAODC_06930	0.80	-2.4
1,408,345	-	prlC	MCAODC_06930	0.80	-0.5
1,408,463	+	prlC	MCAODC_06930	0.86	+0.1
1,408,463	+	prlC	MCAODC_06930	0.86	+3.7
1,408,522	+	prlC	MCAODC_06930	0.89	+1.0
1,408,535	-	prlC	MCAODC_06930	0.90	-1.3
1,408,537	+	prlC	MCAODC_06930	0.90	-2.1
1,408,537	+	prlC	MCAODC_06930	0.90	+1.3
1,408,537	+	prlC	MCAODC_06930	0.90	-2.4
1,408,537	+	prlC	MCAODC_06930	0.90	-0.2
1,408,538	-	prlC	MCAODC_06930	0.90	-0.4
1,408,538	-	prlC	MCAODC_06930	0.90	-0.6
1,408,538	-	prlC	MCAODC_06930	0.90	-1.8
1,408,543	+				+0.3
1,408,543	+				-0.8
1,408,543	+				-3.7
1,408,544	-				-0.2
1,408,559	+				+0.4
1,408,560	-				+1.4
1,408,801	-				+0.3
1,408,801	-				+1.3
1,408,863	+	rsmJ	MCAODC_06935	0.14	+0.7
1,409,005	+	rsmJ	MCAODC_06935	0.33	-1.8
1,409,006	-	rsmJ	MCAODC_06935	0.33	-0.6
1,409,015	+	rsmJ	MCAODC_06935	0.35	+0.3
1,409,016	-	rsmJ	MCAODC_06935	0.35	-2.3
1,409,108	-	rsmJ	MCAODC_06935	0.47	-0.5
1,409,200	-	rsmJ	MCAODC_06935	0.59	+2.3
1,409,200	-	rsmJ	MCAODC_06935	0.59	-0.2
1,409,233	+	rsmJ	MCAODC_06935	0.64	-1.2
1,409,259	-	rsmJ	MCAODC_06935	0.67	-0.1
1,409,259	-	rsmJ	MCAODC_06935	0.67	-2.8
1,409,281	+	rsmJ	MCAODC_06935	0.70	+0.6
1,409,418	-	rsmJ	MCAODC_06935	0.88	-1.4
1,409,465	-				-3.0
1,409,482	+				+0.5
1,409,482	+				+0.4
1,409,482	+				-2.3
1,409,483	-				+2.9
1,409,486	+				-0.4
1,409,486	+				+0.1
1,409,486	+				+0.2
1,409,486	+				-0.1
1,409,486	+				-2.7
1,409,486	+				-2.4
1,409,486	+				+1.1
1,409,487	-				+0.5
1,409,487	-				+0.2
1,409,487	-				-0.2
1,409,487	-				-1.9
1,409,487	-				-4.2
1,409,494	+				-2.0
1,409,494	+				-2.1
1,409,505	-				+1.5
1,409,510	+				+0.9
1,409,510	+				+0.9
1,409,511	-				+0.7
1,409,553	-				-1.8
1,409,556	+				+0.5
1,409,557	-				+1.3
1,409,557	-				-1.8
1,409,557	-				+1.0
1,409,615	+				-0.8
1,409,615	+				-1.5
1,409,647	+				+0.8
1,409,647	+				-2.2
1,409,662	+				+0.1
1,409,662	+				+0.1
1,409,663	-				-0.6
1,409,663	-				+0.5
1,409,664	+				-0.2
1,409,665	-				+1.6
1,409,665	-				-0.1
1,409,665	-				+2.2
1,409,706	-	dtpB	MCAODC_06940	0.10	+2.4
1,409,728	-	dtpB	MCAODC_06940	0.12	+1.2
1,409,728	-	dtpB	MCAODC_06940	0.12	+1.0