Strain Fitness in Escherichia coli ECRC101 around MCAODC_04550
Experiment: Casamino-acids
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Casamino-acids |
---|---|---|---|---|---|
remove | |||||
920,092 | + | -0.2 | |||
920,093 | - | -2.6 | |||
920,151 | + | +0.9 | |||
920,152 | - | -0.3 | |||
920,155 | + | -2.4 | |||
920,155 | + | +1.7 | |||
920,156 | - | -0.6 | |||
920,181 | - | -0.7 | |||
920,182 | + | -1.0 | |||
920,183 | - | +0.5 | |||
920,228 | - | tauE | MCAODC_04545 | 0.15 | +0.4 |
920,307 | - | tauE | MCAODC_04545 | 0.24 | +1.3 |
920,307 | - | tauE | MCAODC_04545 | 0.24 | -0.2 |
920,307 | - | tauE | MCAODC_04545 | 0.24 | -0.1 |
920,356 | - | tauE | MCAODC_04545 | 0.30 | +1.7 |
920,396 | + | tauE | MCAODC_04545 | 0.34 | -2.5 |
920,397 | - | tauE | MCAODC_04545 | 0.34 | +0.2 |
920,409 | - | tauE | MCAODC_04545 | 0.36 | +0.2 |
920,409 | - | tauE | MCAODC_04545 | 0.36 | +1.0 |
920,413 | - | tauE | MCAODC_04545 | 0.36 | -0.4 |
920,459 | + | tauE | MCAODC_04545 | 0.41 | -1.1 |
920,460 | - | tauE | MCAODC_04545 | 0.42 | +1.6 |
920,468 | + | tauE | MCAODC_04545 | 0.42 | -0.5 |
920,469 | - | tauE | MCAODC_04545 | 0.43 | +1.4 |
920,473 | + | tauE | MCAODC_04545 | 0.43 | -3.2 |
920,473 | + | tauE | MCAODC_04545 | 0.43 | +1.0 |
920,473 | + | tauE | MCAODC_04545 | 0.43 | -4.8 |
920,473 | + | tauE | MCAODC_04545 | 0.43 | +0.3 |
920,473 | + | tauE | MCAODC_04545 | 0.43 | +0.8 |
920,474 | - | tauE | MCAODC_04545 | 0.43 | +5.4 |
920,480 | - | tauE | MCAODC_04545 | 0.44 | -0.4 |
920,480 | - | tauE | MCAODC_04545 | 0.44 | -0.0 |
920,480 | - | tauE | MCAODC_04545 | 0.44 | +0.5 |
920,506 | + | tauE | MCAODC_04545 | 0.47 | -2.0 |
920,524 | + | tauE | MCAODC_04545 | 0.49 | +1.1 |
920,525 | - | tauE | MCAODC_04545 | 0.49 | +0.0 |
920,525 | - | tauE | MCAODC_04545 | 0.49 | +0.3 |
920,535 | + | tauE | MCAODC_04545 | 0.50 | +0.2 |
920,547 | + | tauE | MCAODC_04545 | 0.51 | +1.2 |
920,548 | - | tauE | MCAODC_04545 | 0.52 | +0.2 |
920,588 | + | tauE | MCAODC_04545 | 0.56 | -2.2 |
920,588 | + | tauE | MCAODC_04545 | 0.56 | -0.1 |
920,588 | + | tauE | MCAODC_04545 | 0.56 | +0.0 |
920,589 | - | tauE | MCAODC_04545 | 0.56 | -3.1 |
920,589 | - | tauE | MCAODC_04545 | 0.56 | -0.4 |
920,589 | - | tauE | MCAODC_04545 | 0.56 | -1.5 |
920,589 | - | tauE | MCAODC_04545 | 0.56 | +0.1 |
920,589 | - | tauE | MCAODC_04545 | 0.56 | -1.6 |
920,602 | + | tauE | MCAODC_04545 | 0.58 | +1.3 |
920,603 | - | tauE | MCAODC_04545 | 0.58 | +0.0 |
920,603 | - | tauE | MCAODC_04545 | 0.58 | +2.2 |
920,607 | + | tauE | MCAODC_04545 | 0.58 | +1.2 |
920,608 | - | tauE | MCAODC_04545 | 0.58 | +0.2 |
920,768 | + | tauE | MCAODC_04545 | 0.77 | -0.1 |
920,768 | + | tauE | MCAODC_04545 | 0.77 | -1.9 |
920,768 | + | tauE | MCAODC_04545 | 0.77 | -2.2 |
920,768 | + | tauE | MCAODC_04545 | 0.77 | +0.9 |
920,769 | - | tauE | MCAODC_04545 | 0.77 | -0.6 |
920,776 | + | tauE | MCAODC_04545 | 0.78 | -1.1 |
920,777 | - | tauE | MCAODC_04545 | 0.78 | +1.7 |
920,818 | - | tauE | MCAODC_04545 | 0.82 | -1.5 |
920,818 | - | tauE | MCAODC_04545 | 0.82 | +0.1 |
920,923 | - | -0.9 | |||
921,059 | - | +0.1 | |||
921,210 | + | +1.4 | |||
921,225 | + | +0.3 | |||
921,255 | + | +0.2 | |||
921,346 | - | yihQ | MCAODC_04550 | 0.13 | +0.7 |
921,346 | - | yihQ | MCAODC_04550 | 0.13 | -1.6 |
921,360 | + | yihQ | MCAODC_04550 | 0.14 | +0.5 |
921,361 | - | yihQ | MCAODC_04550 | 0.14 | -0.8 |
921,399 | - | yihQ | MCAODC_04550 | 0.16 | +1.1 |
921,462 | + | yihQ | MCAODC_04550 | 0.19 | -2.1 |
921,462 | + | yihQ | MCAODC_04550 | 0.19 | +1.6 |
921,462 | + | yihQ | MCAODC_04550 | 0.19 | -1.3 |
921,462 | + | yihQ | MCAODC_04550 | 0.19 | +0.6 |
921,462 | + | yihQ | MCAODC_04550 | 0.19 | +0.0 |
921,463 | - | yihQ | MCAODC_04550 | 0.19 | +0.6 |
921,463 | - | yihQ | MCAODC_04550 | 0.19 | -0.2 |
921,463 | - | yihQ | MCAODC_04550 | 0.19 | +1.2 |
921,463 | - | yihQ | MCAODC_04550 | 0.19 | +1.3 |
921,463 | - | yihQ | MCAODC_04550 | 0.19 | +0.4 |
921,463 | - | yihQ | MCAODC_04550 | 0.19 | +1.4 |
921,466 | + | yihQ | MCAODC_04550 | 0.19 | +0.7 |
921,467 | - | yihQ | MCAODC_04550 | 0.19 | -3.6 |
921,467 | - | yihQ | MCAODC_04550 | 0.19 | +0.5 |
921,467 | - | yihQ | MCAODC_04550 | 0.19 | -0.5 |
921,490 | + | yihQ | MCAODC_04550 | 0.20 | -0.4 |
921,562 | + | yihQ | MCAODC_04550 | 0.24 | -0.2 |
921,562 | + | yihQ | MCAODC_04550 | 0.24 | -2.2 |
921,562 | + | yihQ | MCAODC_04550 | 0.24 | -3.3 |
921,562 | + | yihQ | MCAODC_04550 | 0.24 | +0.5 |
921,563 | - | yihQ | MCAODC_04550 | 0.24 | -0.3 |
921,563 | - | yihQ | MCAODC_04550 | 0.24 | +0.7 |
921,563 | - | yihQ | MCAODC_04550 | 0.24 | -1.8 |
921,563 | - | yihQ | MCAODC_04550 | 0.24 | +0.4 |
921,563 | - | yihQ | MCAODC_04550 | 0.24 | +0.0 |
921,563 | - | yihQ | MCAODC_04550 | 0.24 | +1.7 |
921,563 | - | yihQ | MCAODC_04550 | 0.24 | -2.1 |
921,607 | + | yihQ | MCAODC_04550 | 0.26 | +0.4 |
921,608 | - | yihQ | MCAODC_04550 | 0.26 | +1.4 |
921,610 | + | yihQ | MCAODC_04550 | 0.26 | +0.8 |
921,610 | + | yihQ | MCAODC_04550 | 0.26 | +2.5 |
921,633 | + | yihQ | MCAODC_04550 | 0.27 | +0.5 |
921,634 | - | yihQ | MCAODC_04550 | 0.27 | -0.7 |
921,634 | - | yihQ | MCAODC_04550 | 0.27 | +1.7 |
921,655 | + | yihQ | MCAODC_04550 | 0.28 | +0.1 |
921,655 | + | yihQ | MCAODC_04550 | 0.28 | +1.7 |
921,655 | + | yihQ | MCAODC_04550 | 0.28 | +0.5 |
921,656 | - | yihQ | MCAODC_04550 | 0.28 | -0.5 |
921,656 | - | yihQ | MCAODC_04550 | 0.28 | +0.1 |
921,682 | + | yihQ | MCAODC_04550 | 0.30 | -3.7 |
921,682 | + | yihQ | MCAODC_04550 | 0.30 | -3.5 |
921,682 | + | yihQ | MCAODC_04550 | 0.30 | +0.9 |
921,682 | + | yihQ | MCAODC_04550 | 0.30 | -0.4 |
921,682 | + | yihQ | MCAODC_04550 | 0.30 | -0.1 |
921,682 | + | yihQ | MCAODC_04550 | 0.30 | -2.2 |
921,683 | - | yihQ | MCAODC_04550 | 0.30 | +0.2 |
921,683 | - | yihQ | MCAODC_04550 | 0.30 | +1.7 |
921,683 | - | yihQ | MCAODC_04550 | 0.30 | +0.9 |
921,683 | - | yihQ | MCAODC_04550 | 0.30 | -0.6 |
921,683 | - | yihQ | MCAODC_04550 | 0.30 | +0.1 |
921,683 | - | yihQ | MCAODC_04550 | 0.30 | -1.0 |
921,683 | - | yihQ | MCAODC_04550 | 0.30 | -2.5 |
921,685 | - | yihQ | MCAODC_04550 | 0.30 | -0.2 |
921,699 | + | yihQ | MCAODC_04550 | 0.30 | +0.5 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +0.9 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +3.5 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | -1.0 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | -1.1 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +1.0 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | -0.4 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +0.7 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +1.9 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +0.5 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | -1.7 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +1.7 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | -1.5 |
921,772 | + | yihQ | MCAODC_04550 | 0.34 | +0.2 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.4 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +1.1 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.9 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | -0.4 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.5 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.7 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.5 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.3 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +1.9 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | -0.9 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | -3.8 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +2.1 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | -0.0 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.2 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.6 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.1 |
921,773 | - | yihQ | MCAODC_04550 | 0.34 | +0.4 |
921,838 | + | yihQ | MCAODC_04550 | 0.37 | +0.5 |
921,839 | - | yihQ | MCAODC_04550 | 0.37 | -2.5 |
921,848 | + | yihQ | MCAODC_04550 | 0.38 | +1.3 |
921,907 | - | yihQ | MCAODC_04550 | 0.41 | -2.6 |
921,960 | + | yihQ | MCAODC_04550 | 0.43 | +0.1 |
921,960 | + | yihQ | MCAODC_04550 | 0.43 | +0.3 |
921,961 | - | yihQ | MCAODC_04550 | 0.43 | +0.6 |
922,036 | - | yihQ | MCAODC_04550 | 0.47 | +0.5 |
922,036 | - | yihQ | MCAODC_04550 | 0.47 | +0.5 |
922,075 | + | yihQ | MCAODC_04550 | 0.49 | -0.5 |
922,075 | + | yihQ | MCAODC_04550 | 0.49 | +1.3 |
922,075 | + | yihQ | MCAODC_04550 | 0.49 | +0.1 |
922,075 | + | yihQ | MCAODC_04550 | 0.49 | +0.5 |
922,076 | - | yihQ | MCAODC_04550 | 0.49 | -0.6 |
922,076 | - | yihQ | MCAODC_04550 | 0.49 | +0.3 |
922,077 | + | yihQ | MCAODC_04550 | 0.49 | +0.6 |
922,078 | - | yihQ | MCAODC_04550 | 0.49 | -2.8 |
922,087 | + | yihQ | MCAODC_04550 | 0.49 | +0.8 |
922,088 | - | yihQ | MCAODC_04550 | 0.50 | -0.8 |
922,088 | - | yihQ | MCAODC_04550 | 0.50 | -0.1 |
922,088 | - | yihQ | MCAODC_04550 | 0.50 | +1.2 |
922,101 | + | yihQ | MCAODC_04550 | 0.50 | +0.7 |
922,102 | - | yihQ | MCAODC_04550 | 0.50 | +2.1 |
922,165 | + | yihQ | MCAODC_04550 | 0.53 | +0.4 |
922,225 | + | yihQ | MCAODC_04550 | 0.56 | +1.5 |
922,225 | + | yihQ | MCAODC_04550 | 0.56 | +1.2 |
922,245 | + | yihQ | MCAODC_04550 | 0.57 | +1.5 |
922,321 | + | yihQ | MCAODC_04550 | 0.61 | +0.5 |
922,351 | - | yihQ | MCAODC_04550 | 0.62 | +0.7 |
922,351 | - | yihQ | MCAODC_04550 | 0.62 | -0.1 |
922,386 | + | yihQ | MCAODC_04550 | 0.64 | +0.7 |
922,387 | - | yihQ | MCAODC_04550 | 0.64 | +1.0 |
922,387 | - | yihQ | MCAODC_04550 | 0.64 | +0.9 |
922,390 | + | yihQ | MCAODC_04550 | 0.64 | +0.6 |
922,390 | + | yihQ | MCAODC_04550 | 0.64 | +1.1 |
922,390 | + | yihQ | MCAODC_04550 | 0.64 | -0.8 |
922,391 | - | yihQ | MCAODC_04550 | 0.64 | -4.8 |
922,438 | - | yihQ | MCAODC_04550 | 0.67 | +0.7 |
922,452 | + | yihQ | MCAODC_04550 | 0.67 | +1.1 |
922,468 | + | yihQ | MCAODC_04550 | 0.68 | -1.7 |
922,550 | + | yihQ | MCAODC_04550 | 0.72 | +1.1 |
922,550 | + | yihQ | MCAODC_04550 | 0.72 | +1.3 |
922,551 | - | yihQ | MCAODC_04550 | 0.72 | +0.0 |
922,602 | + | yihQ | MCAODC_04550 | 0.75 | -1.5 |
922,602 | + | yihQ | MCAODC_04550 | 0.75 | -0.4 |
922,602 | + | yihQ | MCAODC_04550 | 0.75 | -0.7 |
922,603 | - | yihQ | MCAODC_04550 | 0.75 | +1.2 |
922,603 | - | yihQ | MCAODC_04550 | 0.75 | +0.9 |
922,603 | - | yihQ | MCAODC_04550 | 0.75 | +1.7 |
922,603 | - | yihQ | MCAODC_04550 | 0.75 | +1.4 |
922,790 | - | yihQ | MCAODC_04550 | 0.84 | +1.2 |
922,858 | + | yihQ | MCAODC_04550 | 0.87 | +0.0 |
922,879 | + | yihQ | MCAODC_04550 | 0.88 | -0.2 |
922,879 | + | yihQ | MCAODC_04550 | 0.88 | -0.2 |
922,879 | + | yihQ | MCAODC_04550 | 0.88 | +0.0 |
922,891 | + | yihQ | MCAODC_04550 | 0.89 | +2.0 |
922,892 | - | yihQ | MCAODC_04550 | 0.89 | -0.2 |
922,898 | - | yihQ | MCAODC_04550 | 0.89 | -0.9 |
922,905 | - | yihQ | MCAODC_04550 | 0.90 | +1.1 |
922,978 | - | +1.3 | |||
923,024 | + | -2.4 | |||
923,025 | - | -2.8 | |||
923,025 | - | -1.0 | |||
923,025 | - | +0.9 | |||
923,025 | - | +0.4 | |||
923,102 | + | +1.4 | |||
923,113 | + | -0.3 | |||
923,113 | + | +1.0 | |||
923,114 | - | -0.4 | |||
923,114 | - | +1.4 | |||
923,114 | - | +1.7 | |||
923,114 | - | -0.2 | |||
923,114 | - | +0.2 | |||
923,114 | - | -0.1 | |||
923,208 | + | +0.9 | |||
923,248 | - | -3.1 | |||
923,248 | - | -0.3 | |||
923,263 | - | +2.0 | |||
923,268 | + | +0.6 | |||
923,269 | - | +0.1 | |||
923,276 | - | -1.0 | |||
923,290 | + | +1.9 | |||
923,293 | - | +0.8 | |||
923,320 | + | melB | MCAODC_04555 | 0.11 | +0.4 |
923,320 | + | melB | MCAODC_04555 | 0.11 | +0.6 |
923,320 | + | melB | MCAODC_04555 | 0.11 | -0.3 |
923,320 | + | melB | MCAODC_04555 | 0.11 | +1.2 |
923,320 | + | melB | MCAODC_04555 | 0.11 | -0.4 |
923,320 | + | melB | MCAODC_04555 | 0.11 | -0.7 |
923,320 | + | melB | MCAODC_04555 | 0.11 | -1.4 |
923,321 | - | melB | MCAODC_04555 | 0.12 | -3.8 |
923,331 | + | melB | MCAODC_04555 | 0.12 | +1.1 |
923,331 | + | melB | MCAODC_04555 | 0.12 | +1.0 |
923,370 | + | melB | MCAODC_04555 | 0.15 | -0.1 |
923,404 | - | melB | MCAODC_04555 | 0.18 | -0.9 |
923,484 | + | melB | MCAODC_04555 | 0.23 | +1.2 |
923,511 | + | melB | MCAODC_04555 | 0.25 | +0.2 |
923,512 | - | melB | MCAODC_04555 | 0.25 | +0.2 |
923,530 | - | melB | MCAODC_04555 | 0.27 | +0.0 |
923,538 | + | melB | MCAODC_04555 | 0.27 | +1.2 |
923,538 | + | melB | MCAODC_04555 | 0.27 | +0.9 |
923,546 | - | melB | MCAODC_04555 | 0.28 | +0.6 |
923,579 | - | melB | MCAODC_04555 | 0.30 | +0.2 |
923,579 | - | melB | MCAODC_04555 | 0.30 | -0.4 |
923,598 | + | melB | MCAODC_04555 | 0.32 | +0.7 |
923,598 | + | melB | MCAODC_04555 | 0.32 | +0.3 |
923,598 | + | melB | MCAODC_04555 | 0.32 | -0.3 |
923,598 | + | melB | MCAODC_04555 | 0.32 | -3.4 |
923,776 | - | melB | MCAODC_04555 | 0.44 | +1.8 |
923,809 | + | melB | MCAODC_04555 | 0.47 | -0.0 |
923,809 | + | melB | MCAODC_04555 | 0.47 | +0.5 |
923,809 | + | melB | MCAODC_04555 | 0.47 | -1.0 |
923,810 | - | melB | MCAODC_04555 | 0.47 | -0.5 |
923,810 | - | melB | MCAODC_04555 | 0.47 | -2.5 |
923,810 | - | melB | MCAODC_04555 | 0.47 | +0.9 |
923,810 | - | melB | MCAODC_04555 | 0.47 | -1.4 |
923,810 | - | melB | MCAODC_04555 | 0.47 | -1.7 |
923,810 | - | melB | MCAODC_04555 | 0.47 | -0.0 |
923,810 | - | melB | MCAODC_04555 | 0.47 | -0.7 |
923,810 | - | melB | MCAODC_04555 | 0.47 | +1.5 |
923,810 | - | melB | MCAODC_04555 | 0.47 | +1.5 |
923,924 | + | melB | MCAODC_04555 | 0.55 | -1.6 |
923,935 | - | melB | MCAODC_04555 | 0.56 | +1.9 |
923,959 | + | melB | MCAODC_04555 | 0.58 | +0.6 |
923,959 | + | melB | MCAODC_04555 | 0.58 | -1.4 |
923,963 | - | melB | MCAODC_04555 | 0.58 | +0.8 |
923,963 | - | melB | MCAODC_04555 | 0.58 | -0.3 |
923,975 | + | melB | MCAODC_04555 | 0.59 | -0.3 |
923,979 | + | melB | MCAODC_04555 | 0.59 | -0.7 |
923,980 | - | melB | MCAODC_04555 | 0.59 | +1.1 |
924,002 | - | melB | MCAODC_04555 | 0.61 | +0.3 |
924,002 | - | melB | MCAODC_04555 | 0.61 | +0.2 |
924,003 | + | melB | MCAODC_04555 | 0.61 | -0.4 |
924,088 | + | melB | MCAODC_04555 | 0.67 | -2.5 |
924,089 | - | melB | MCAODC_04555 | 0.67 | -0.5 |
924,089 | - | melB | MCAODC_04555 | 0.67 | -1.3 |
924,101 | + | melB | MCAODC_04555 | 0.68 | -0.1 |
Or see this region's nucleotide sequence