Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17030

Experiment: Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM
3,738,166	+		LRK53_RS17025	0.45	+1.5
3,738,166	+		LRK53_RS17025	0.45	-2.4
3,738,167	-		LRK53_RS17025	0.46	-1.1
3,738,167	-		LRK53_RS17025	0.46	+0.0
3,738,328	+		LRK53_RS17025	0.59	+0.7
3,738,328	+		LRK53_RS17025	0.59	-0.9
3,738,328	+		LRK53_RS17025	0.59	-0.4
3,738,328	+		LRK53_RS17025	0.59	-0.1
3,738,328	+		LRK53_RS17025	0.59	-1.1
3,738,329	-		LRK53_RS17025	0.59	-1.9
3,738,329	-		LRK53_RS17025	0.59	-0.5
3,738,329	-		LRK53_RS17025	0.59	-0.5
3,738,329	-		LRK53_RS17025	0.59	-0.5
3,738,329	-		LRK53_RS17025	0.59	-0.5
3,738,329	-		LRK53_RS17025	0.59	+0.3
3,738,329	-		LRK53_RS17025	0.59	+0.8
3,738,329	-		LRK53_RS17025	0.59	-1.5
3,738,329	-		LRK53_RS17025	0.59	-3.0
3,738,329	-		LRK53_RS17025	0.59	-0.1
3,738,329	-		LRK53_RS17025	0.59	-0.1
3,738,329	-		LRK53_RS17025	0.59	-1.5
3,738,329	-		LRK53_RS17025	0.59	-3.0
3,738,329	-		LRK53_RS17025	0.59	-2.7
3,738,329	-		LRK53_RS17025	0.59	-0.2
3,738,329	-		LRK53_RS17025	0.59	-2.4
3,738,332	+		LRK53_RS17025	0.60	-0.8
3,738,332	+		LRK53_RS17025	0.60	-1.5
3,738,333	-		LRK53_RS17025	0.60	-0.3
3,738,454	+		LRK53_RS17025	0.70	-1.2
3,738,454	+		LRK53_RS17025	0.70	-1.0
3,738,454	+		LRK53_RS17025	0.70	+0.1
3,738,454	+		LRK53_RS17025	0.70	-2.5
3,738,454	+		LRK53_RS17025	0.70	-0.8
3,738,454	+		LRK53_RS17025	0.70	-1.8
3,738,454	+		LRK53_RS17025	0.70	+1.0
3,738,454	+		LRK53_RS17025	0.70	-1.3
3,738,454	+		LRK53_RS17025	0.70	-0.7
3,738,454	+		LRK53_RS17025	0.70	-1.7
3,738,454	+		LRK53_RS17025	0.70	+0.6
3,738,455	-		LRK53_RS17025	0.70	-0.2
3,738,455	-		LRK53_RS17025	0.70	-1.3
3,738,455	-		LRK53_RS17025	0.70	-1.1
3,738,455	-		LRK53_RS17025	0.70	-0.7
3,738,455	-		LRK53_RS17025	0.70	-1.6
3,738,455	-		LRK53_RS17025	0.70	+1.7
3,738,455	-		LRK53_RS17025	0.70	+0.1
3,738,455	-		LRK53_RS17025	0.70	-0.1
3,738,455	-		LRK53_RS17025	0.70	-1.5
3,738,455	-		LRK53_RS17025	0.70	-1.1
3,738,455	-		LRK53_RS17025	0.70	-0.4
3,738,455	-		LRK53_RS17025	0.70	-1.4
3,738,670	+		LRK53_RS17025	0.89	-0.3
3,738,670	+		LRK53_RS17025	0.89	+0.3
3,738,670	+		LRK53_RS17025	0.89	-0.1
3,738,670	+		LRK53_RS17025	0.89	-0.1
3,738,670	+		LRK53_RS17025	0.89	+1.5
3,738,670	+		LRK53_RS17025	0.89	+0.7
3,738,670	+		LRK53_RS17025	0.89	-0.6
3,738,670	+		LRK53_RS17025	0.89	-2.3
3,738,670	+		LRK53_RS17025	0.89	-2.1
3,738,671	-		LRK53_RS17025	0.89	-0.1
3,738,671	-		LRK53_RS17025	0.89	-0.4
3,738,671	-		LRK53_RS17025	0.89	+0.2
3,738,671	-		LRK53_RS17025	0.89	+0.1
3,738,671	-		LRK53_RS17025	0.89	+0.4
3,738,769	+				-0.8
3,738,769	+				-0.4
3,738,769	+				-0.3
3,738,770	-				-1.6
3,738,770	-				-0.7
3,738,770	-				-1.3
3,738,770	-				-0.9
3,738,783	-				-0.3
3,738,783	-				-1.4
3,738,783	-				+0.2
3,738,855	+				-1.0
3,738,916	+				-1.3
3,738,916	+				-0.5
3,738,916	+				-0.5
3,738,916	+				-1.1
3,738,917	-				-0.8
3,738,917	-				-2.4
3,738,917	-				-0.3
3,738,963	+				+1.4
3,738,963	+				-0.4
3,738,963	+				-0.4
3,738,963	+				-1.2
3,738,963	+				-1.9
3,738,963	+				-0.9
3,738,963	+				+0.6
3,738,963	+				-1.1
3,738,963	+				-2.0
3,738,963	+				-2.6
3,738,963	+				+1.3
3,738,963	+				+0.6
3,738,964	-				-0.4
3,738,964	-				-0.7
3,738,964	-				-0.1
3,738,964	-				-1.4
3,738,964	-				-1.2
3,738,964	-				-0.4
3,738,964	-				+1.7
3,738,964	-				+0.2
3,738,964	-				-1.4
3,738,989	+				-2.2
3,738,989	+				-3.0
3,738,989	+				-0.3
3,738,990	-				+1.6
3,738,990	-				+0.3
3,739,369	+		LRK53_RS17030	0.27	-1.0
3,739,369	+		LRK53_RS17030	0.27	-0.5
3,739,369	+		LRK53_RS17030	0.27	+0.6
3,739,369	+		LRK53_RS17030	0.27	-0.8
3,739,369	+		LRK53_RS17030	0.27	-0.3
3,739,369	+		LRK53_RS17030	0.27	-3.5
3,739,370	-		LRK53_RS17030	0.27	-0.3
3,739,370	-		LRK53_RS17030	0.27	-1.2
3,739,370	-		LRK53_RS17030	0.27	-0.3
3,739,370	-		LRK53_RS17030	0.27	-0.1
3,739,492	+		LRK53_RS17030	0.35	+0.7
3,739,493	-		LRK53_RS17030	0.35	-1.1
3,739,493	-		LRK53_RS17030	0.35	+0.7
3,739,717	+		LRK53_RS17030	0.50	-1.2
3,739,717	+		LRK53_RS17030	0.50	-0.8
3,739,717	+		LRK53_RS17030	0.50	+0.7
3,739,718	-		LRK53_RS17030	0.50	-1.1
3,739,718	-		LRK53_RS17030	0.50	-1.0
3,739,718	-		LRK53_RS17030	0.50	-0.1
3,739,718	-		LRK53_RS17030	0.50	-1.0
3,739,718	-		LRK53_RS17030	0.50	-0.5
3,739,768	+		LRK53_RS17030	0.53	-1.3
3,739,768	+		LRK53_RS17030	0.53	-0.8
3,739,768	+		LRK53_RS17030	0.53	-1.1
3,739,769	-		LRK53_RS17030	0.53	+0.7
3,739,769	-		LRK53_RS17030	0.53	-0.8
3,739,792	+		LRK53_RS17030	0.55	-1.8
3,739,792	+		LRK53_RS17030	0.55	-1.3
3,739,792	+		LRK53_RS17030	0.55	-1.7
3,739,792	+		LRK53_RS17030	0.55	-2.8
3,739,792	+		LRK53_RS17030	0.55	-2.4
3,739,793	-		LRK53_RS17030	0.55	+0.5
3,740,002	+		LRK53_RS17030	0.68	-0.8
3,740,134	+		LRK53_RS17030	0.77	-0.5
3,740,134	+		LRK53_RS17030	0.77	-1.3
3,740,134	+		LRK53_RS17030	0.77	-2.0
3,740,134	+		LRK53_RS17030	0.77	+0.4
3,740,134	+		LRK53_RS17030	0.77	-2.2
3,740,135	-		LRK53_RS17030	0.77	+1.1
3,740,135	-		LRK53_RS17030	0.77	-1.4
3,740,135	-		LRK53_RS17030	0.77	+0.2
3,740,135	-		LRK53_RS17030	0.77	+0.6
3,740,135	-		LRK53_RS17030	0.77	-1.2
3,740,135	-		LRK53_RS17030	0.77	+0.8
3,740,135	-		LRK53_RS17030	0.77	+1.2
3,740,156	-		LRK53_RS17030	0.78	-0.4
3,740,179	+		LRK53_RS17030	0.80	-0.1
3,740,179	+		LRK53_RS17030	0.80	-1.8
3,740,179	+		LRK53_RS17030	0.80	-1.3
3,740,179	+		LRK53_RS17030	0.80	+1.2
3,740,180	-		LRK53_RS17030	0.80	+0.4
3,740,180	-		LRK53_RS17030	0.80	+0.1
3,740,180	-		LRK53_RS17030	0.80	-1.4
3,740,180	-		LRK53_RS17030	0.80	-1.3
3,740,180	-		LRK53_RS17030	0.80	-0.8
3,740,180	-		LRK53_RS17030	0.80	-2.4
3,740,180	-		LRK53_RS17030	0.80	-1.2
3,740,183	+		LRK53_RS17030	0.80	-0.7
3,740,183	+		LRK53_RS17030	0.80	+0.6
3,740,183	+		LRK53_RS17030	0.80	-0.7
3,740,183	+		LRK53_RS17030	0.80	-1.0
3,740,183	+		LRK53_RS17030	0.80	-1.4
3,740,183	+		LRK53_RS17030	0.80	-0.5
3,740,183	+		LRK53_RS17030	0.80	-1.3
3,740,183	+		LRK53_RS17030	0.80	-1.3
3,740,183	+		LRK53_RS17030	0.80	+1.1
3,740,183	+		LRK53_RS17030	0.80	-0.1
3,740,183	+		LRK53_RS17030	0.80	+0.3
3,740,183	+		LRK53_RS17030	0.80	+0.9
3,740,184	-		LRK53_RS17030	0.80	-1.0
3,740,184	-		LRK53_RS17030	0.80	-0.8
3,740,184	-		LRK53_RS17030	0.80	-0.9
3,740,184	-		LRK53_RS17030	0.80	+1.4
3,740,184	-		LRK53_RS17030	0.80	-0.1
3,740,184	-		LRK53_RS17030	0.80	-0.5
3,740,184	-		LRK53_RS17030	0.80	-0.1
3,740,184	-		LRK53_RS17030	0.80	-1.0
3,740,184	-		LRK53_RS17030	0.80	-0.6
3,740,184	-		LRK53_RS17030	0.80	-0.8
3,740,184	-		LRK53_RS17030	0.80	-1.1
3,740,184	-		LRK53_RS17030	0.80	-0.3
3,740,184	-		LRK53_RS17030	0.80	+1.1
3,740,184	-		LRK53_RS17030	0.80	+1.2
3,740,184	-		LRK53_RS17030	0.80	-1.1
3,740,184	-		LRK53_RS17030	0.80	-1.7
3,740,184	-		LRK53_RS17030	0.80	+1.0
3,740,184	-		LRK53_RS17030	0.80	+1.2
3,740,185	+		LRK53_RS17030	0.80	-1.2
3,740,185	+		LRK53_RS17030	0.80	+1.7
3,740,185	+		LRK53_RS17030	0.80	-1.1
3,740,185	+		LRK53_RS17030	0.80	-2.2
3,740,185	+		LRK53_RS17030	0.80	-2.4
3,740,185	+		LRK53_RS17030	0.80	+1.2
3,740,186	-		LRK53_RS17030	0.80	+0.6
3,740,186	-		LRK53_RS17030	0.80	-2.0
3,740,186	-		LRK53_RS17030	0.80	-0.8
3,740,186	-		LRK53_RS17030	0.80	-0.1
3,740,186	-		LRK53_RS17030	0.80	+0.4
3,740,276	-		LRK53_RS17030	0.86	-2.1
3,740,276	-		LRK53_RS17030	0.86	-1.6
3,740,276	-		LRK53_RS17030	0.86	-1.9
3,740,276	-		LRK53_RS17030	0.86	-2.2
3,740,276	-		LRK53_RS17030	0.86	-0.9
3,740,276	-		LRK53_RS17030	0.86	-1.6
3,740,413	+				-0.4
3,740,414	-				-2.3
3,740,414	-				-0.3
3,740,414	-				-0.6
3,740,414	-				-0.4
3,740,431	+				-0.3
3,740,431	+				-1.0
3,740,431	+				+1.0
3,740,431	+				+0.1
3,740,482	+				+2.2
3,740,482	+				+0.7
3,740,482	+				+0.6
3,740,483	-				-0.7
3,740,483	-				-2.9
3,740,483	-				-0.1
3,740,483	-				+0.5
3,740,483	-				-1.3
3,740,552	-				+0.5
3,740,574	+				-0.3
3,740,627	+				+0.2
3,740,627	+				-0.4
3,740,627	+				-0.4
3,740,627	+				-1.2
3,740,627	+				-1.6
3,740,628	-				+1.1
3,740,628	-				+0.7
3,740,628	-				-0.9
3,740,628	-				-0.1
3,740,628	-				+0.7
3,740,745	-				-0.0
3,740,774	+				+0.2
3,740,774	+				-1.0
3,740,774	+				+0.0
3,740,774	+				+1.1
3,740,774	+				+0.6
3,740,774	+				-1.8
3,740,774	+				-1.5
3,740,774	+				-0.4
3,740,775	-				+0.6
3,740,775	-				-1.5
3,740,775	-				+0.9
3,740,775	-				-0.4
3,740,775	-				-0.7
3,740,775	-				+1.3
3,741,098	+		LRK53_RS17035	0.19	+0.3
3,741,098	+		LRK53_RS17035	0.19	-0.8
3,741,098	+		LRK53_RS17035	0.19	-2.8
3,741,098	+		LRK53_RS17035	0.19	-0.6
3,741,099	-		LRK53_RS17035	0.19	-0.3
3,741,099	-		LRK53_RS17035	0.19	-1.9
3,741,099	-		LRK53_RS17035	0.19	-0.8
3,741,099	-		LRK53_RS17035	0.19	+1.2
3,741,128	+		LRK53_RS17035	0.20	-0.6
3,741,129	-		LRK53_RS17035	0.20	-0.5
3,741,129	-		LRK53_RS17035	0.20	-1.3
3,741,167	+		LRK53_RS17035	0.21	-0.9
3,741,168	-		LRK53_RS17035	0.21	-0.3
3,741,198	-		LRK53_RS17035	0.22	-0.4
3,741,330	-		LRK53_RS17035	0.26	+0.2
3,741,351	-		LRK53_RS17035	0.27	+0.1
3,741,446	+		LRK53_RS17035	0.30	+1.4
3,741,446	+		LRK53_RS17035	0.30	-0.3
3,741,446	+		LRK53_RS17035	0.30	-0.4
3,741,446	+		LRK53_RS17035	0.30	-0.7
3,741,446	+		LRK53_RS17035	0.30	-0.7
3,741,446	+		LRK53_RS17035	0.30	-1.1
3,741,447	-		LRK53_RS17035	0.30	-0.9
3,741,447	-		LRK53_RS17035	0.30	-0.1
3,741,447	-		LRK53_RS17035	0.30	+1.5
3,741,447	-		LRK53_RS17035	0.30	-0.9
3,741,447	-		LRK53_RS17035	0.30	-0.0
3,741,447	-		LRK53_RS17035	0.30	-0.8
3,741,447	-		LRK53_RS17035	0.30	-2.0
3,741,447	-		LRK53_RS17035	0.30	+0.5
3,741,447	-		LRK53_RS17035	0.30	-2.5
3,741,447	-		LRK53_RS17035	0.30	-1.5
3,741,447	-		LRK53_RS17035	0.30	-1.7