Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15405

Experiment: Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM
3,365,648	+		LRK53_RS15400	0.29	-0.6
3,365,648	+		LRK53_RS15400	0.29	-1.4
3,365,648	+		LRK53_RS15400	0.29	+1.5
3,365,648	+		LRK53_RS15400	0.29	+0.4
3,365,648	+		LRK53_RS15400	0.29	-0.4
3,365,648	+		LRK53_RS15400	0.29	+0.2
3,365,648	+		LRK53_RS15400	0.29	-2.7
3,365,649	-		LRK53_RS15400	0.29	-0.6
3,365,649	-		LRK53_RS15400	0.29	+0.2
3,365,649	-		LRK53_RS15400	0.29	-1.0
3,365,685	+		LRK53_RS15400	0.32	-0.5
3,365,686	-		LRK53_RS15400	0.32	-0.2
3,365,741	+		LRK53_RS15400	0.37	-0.6
3,365,741	+		LRK53_RS15400	0.37	-1.1
3,365,741	+		LRK53_RS15400	0.37	+0.1
3,365,742	-		LRK53_RS15400	0.37	-0.6
3,365,742	-		LRK53_RS15400	0.37	-0.1
3,365,742	-		LRK53_RS15400	0.37	-0.8
3,365,845	+		LRK53_RS15400	0.45	+0.6
3,365,845	+		LRK53_RS15400	0.45	-0.2
3,365,845	+		LRK53_RS15400	0.45	+0.2
3,365,845	+		LRK53_RS15400	0.45	-0.5
3,365,845	+		LRK53_RS15400	0.45	-1.1
3,365,846	-		LRK53_RS15400	0.45	-1.1
3,365,846	-		LRK53_RS15400	0.45	-0.8
3,365,846	-		LRK53_RS15400	0.45	+0.4
3,365,846	-		LRK53_RS15400	0.45	+0.4
3,365,846	-		LRK53_RS15400	0.45	+0.1
3,365,846	-		LRK53_RS15400	0.45	+0.6
3,365,846	-		LRK53_RS15400	0.45	+1.4
3,365,846	-		LRK53_RS15400	0.45	-1.5
3,365,903	+		LRK53_RS15400	0.49	-0.3
3,366,065	+		LRK53_RS15400	0.62	-1.0
3,366,065	+		LRK53_RS15400	0.62	-1.0
3,366,065	+		LRK53_RS15400	0.62	-0.8
3,366,101	+		LRK53_RS15400	0.65	+0.7
3,366,102	-		LRK53_RS15400	0.65	-1.5
3,366,102	-		LRK53_RS15400	0.65	-0.2
3,366,194	+		LRK53_RS15400	0.73	-0.8
3,366,194	+		LRK53_RS15400	0.73	-0.2
3,366,194	+		LRK53_RS15400	0.73	+0.4
3,366,194	+		LRK53_RS15400	0.73	-1.8
3,366,194	+		LRK53_RS15400	0.73	-1.6
3,366,194	+		LRK53_RS15400	0.73	+0.2
3,366,195	-		LRK53_RS15400	0.73	-0.7
3,366,195	-		LRK53_RS15400	0.73	-0.9
3,366,267	-		LRK53_RS15400	0.79	-0.1
3,366,267	-		LRK53_RS15400	0.79	-0.7
3,366,352	+		LRK53_RS15400	0.85	-0.4
3,366,352	+		LRK53_RS15400	0.85	+0.1
3,366,352	+		LRK53_RS15400	0.85	-0.3
3,366,352	+		LRK53_RS15400	0.85	-0.5
3,366,352	+		LRK53_RS15400	0.85	-0.4
3,366,352	+		LRK53_RS15400	0.85	+4.5
3,366,352	+		LRK53_RS15400	0.85	-1.1
3,366,352	+		LRK53_RS15400	0.85	-0.8
3,366,352	+		LRK53_RS15400	0.85	-0.4
3,366,352	+		LRK53_RS15400	0.85	-0.3
3,366,352	+		LRK53_RS15400	0.85	+0.2
3,366,352	+		LRK53_RS15400	0.85	+1.4
3,366,352	+		LRK53_RS15400	0.85	+0.4
3,366,352	+		LRK53_RS15400	0.85	-1.7
3,366,352	+		LRK53_RS15400	0.85	+2.2
3,366,352	+		LRK53_RS15400	0.85	-1.8
3,366,352	+		LRK53_RS15400	0.85	-2.1
3,366,352	+		LRK53_RS15400	0.85	-1.0
3,366,352	+		LRK53_RS15400	0.85	-0.6
3,366,352	+		LRK53_RS15400	0.85	-1.0
3,366,352	+		LRK53_RS15400	0.85	-0.6
3,366,352	+		LRK53_RS15400	0.85	-0.5
3,366,352	+		LRK53_RS15400	0.85	-0.7
3,366,352	+		LRK53_RS15400	0.85	-0.1
3,366,352	+		LRK53_RS15400	0.85	-0.6
3,366,352	+		LRK53_RS15400	0.85	+1.2
3,366,352	+		LRK53_RS15400	0.85	-0.1
3,366,352	+		LRK53_RS15400	0.85	-1.0
3,366,352	+		LRK53_RS15400	0.85	-0.1
3,366,352	+		LRK53_RS15400	0.85	-0.3
3,366,353	-		LRK53_RS15400	0.85	-1.1
3,366,353	-		LRK53_RS15400	0.85	-1.0
3,366,353	-		LRK53_RS15400	0.85	+2.2
3,366,353	-		LRK53_RS15400	0.85	-2.5
3,366,353	-		LRK53_RS15400	0.85	-1.8
3,366,353	-		LRK53_RS15400	0.85	-0.1
3,366,353	-		LRK53_RS15400	0.85	-0.3
3,366,353	-		LRK53_RS15400	0.85	-1.3
3,366,353	-		LRK53_RS15400	0.85	+1.8
3,366,353	-		LRK53_RS15400	0.85	-0.2
3,366,353	-		LRK53_RS15400	0.85	-1.1
3,366,353	-		LRK53_RS15400	0.85	-0.6
3,366,353	-		LRK53_RS15400	0.85	-0.2
3,366,353	-		LRK53_RS15400	0.85	-1.8
3,366,353	-		LRK53_RS15400	0.85	-0.5
3,366,353	-		LRK53_RS15400	0.85	-0.5
3,366,353	-		LRK53_RS15400	0.85	+1.5
3,366,353	-		LRK53_RS15400	0.85	-0.8
3,366,353	-		LRK53_RS15400	0.85	+1.1
3,366,353	-		LRK53_RS15400	0.85	-0.8
3,366,353	-		LRK53_RS15400	0.85	+0.4
3,366,353	-		LRK53_RS15400	0.85	+2.9
3,366,353	-		LRK53_RS15400	0.85	-0.0
3,366,353	-		LRK53_RS15400	0.85	-0.5
3,366,353	-		LRK53_RS15400	0.85	-2.0
3,366,353	-		LRK53_RS15400	0.85	-1.1
3,366,353	-		LRK53_RS15400	0.85	+2.4
3,366,353	-		LRK53_RS15400	0.85	-1.4
3,366,353	-		LRK53_RS15400	0.85	+0.1
3,366,353	-		LRK53_RS15400	0.85	-0.7
3,366,425	+				+0.1
3,366,426	-				-0.8
3,366,464	+				-0.2
3,366,464	+				-1.3
3,366,464	+				+0.2
3,366,464	+				-2.9
3,366,464	+				-0.4
3,366,464	+				-0.1
3,366,464	+				-1.4
3,366,464	+				+0.0
3,366,464	+				-2.5
3,366,464	+				+1.6
3,366,464	+				-0.9
3,366,464	+				-2.0
3,366,465	-				-0.4
3,366,465	-				-1.0
3,366,465	-				+0.1
3,366,465	-				-0.5
3,366,465	-				-2.3
3,366,465	-				-0.2
3,366,465	-				+0.2
3,366,523	+				+0.4
3,366,645	+		LRK53_RS15405	0.10	+0.4
3,366,645	+		LRK53_RS15405	0.10	-1.8
3,366,646	-		LRK53_RS15405	0.10	+0.4
3,366,646	-		LRK53_RS15405	0.10	+0.5
3,366,674	+		LRK53_RS15405	0.13	-0.5
3,366,674	+		LRK53_RS15405	0.13	-1.4
3,366,674	+		LRK53_RS15405	0.13	-0.5
3,366,674	+		LRK53_RS15405	0.13	-0.9
3,366,674	+		LRK53_RS15405	0.13	-0.2
3,366,674	+		LRK53_RS15405	0.13	-1.2
3,366,674	+		LRK53_RS15405	0.13	+1.4
3,366,675	-		LRK53_RS15405	0.13	-0.2
3,366,675	-		LRK53_RS15405	0.13	+1.3
3,366,675	-		LRK53_RS15405	0.13	+0.8
3,366,675	-		LRK53_RS15405	0.13	-0.7
3,366,675	-		LRK53_RS15405	0.13	+0.6
3,366,675	-		LRK53_RS15405	0.13	+1.4
3,366,675	-		LRK53_RS15405	0.13	-1.4
3,366,675	-		LRK53_RS15405	0.13	-1.6
3,366,675	-		LRK53_RS15405	0.13	-1.0
3,366,677	+		LRK53_RS15405	0.13	-0.6
3,366,677	+		LRK53_RS15405	0.13	-0.4
3,366,677	+		LRK53_RS15405	0.13	+0.4
3,366,677	+		LRK53_RS15405	0.13	-0.2
3,366,677	+		LRK53_RS15405	0.13	+0.9
3,366,677	+		LRK53_RS15405	0.13	-0.4
3,366,677	+		LRK53_RS15405	0.13	-0.9
3,366,677	+		LRK53_RS15405	0.13	-0.3
3,366,677	+		LRK53_RS15405	0.13	-0.2
3,366,678	-		LRK53_RS15405	0.13	-1.7
3,366,678	-		LRK53_RS15405	0.13	+0.6
3,366,678	-		LRK53_RS15405	0.13	-0.6
3,366,678	-		LRK53_RS15405	0.13	-2.5
3,366,678	-		LRK53_RS15405	0.13	-0.4
3,366,678	-		LRK53_RS15405	0.13	-0.6
3,366,678	-		LRK53_RS15405	0.13	-1.2
3,366,678	-		LRK53_RS15405	0.13	-0.6
3,366,678	-		LRK53_RS15405	0.13	-0.4
3,366,678	-		LRK53_RS15405	0.13	-0.4
3,366,678	-		LRK53_RS15405	0.13	-0.2
3,366,683	+		LRK53_RS15405	0.14	+0.4
3,366,683	+		LRK53_RS15405	0.14	-0.6
3,366,683	+		LRK53_RS15405	0.14	+0.6
3,366,683	+		LRK53_RS15405	0.14	-1.3
3,366,683	+		LRK53_RS15405	0.14	-0.6
3,366,683	+		LRK53_RS15405	0.14	-1.4
3,366,684	-		LRK53_RS15405	0.14	-0.2
3,366,684	-		LRK53_RS15405	0.14	+0.3
3,366,684	-		LRK53_RS15405	0.14	-0.9
3,366,684	-		LRK53_RS15405	0.14	-0.7
3,366,684	-		LRK53_RS15405	0.14	+0.8
3,366,684	-		LRK53_RS15405	0.14	-0.6
3,366,728	+		LRK53_RS15405	0.18	+0.6
3,366,729	-		LRK53_RS15405	0.18	-0.4
3,366,729	-		LRK53_RS15405	0.18	+0.2
3,366,729	-		LRK53_RS15405	0.18	+0.0
3,366,729	-		LRK53_RS15405	0.18	-0.0
3,366,729	-		LRK53_RS15405	0.18	-1.1
3,366,758	+		LRK53_RS15405	0.21	-1.0
3,366,809	+		LRK53_RS15405	0.26	-1.2
3,366,809	+		LRK53_RS15405	0.26	+0.7
3,366,809	+		LRK53_RS15405	0.26	-0.7
3,366,809	+		LRK53_RS15405	0.26	-0.1
3,366,809	+		LRK53_RS15405	0.26	+0.1
3,366,809	+		LRK53_RS15405	0.26	-1.4
3,366,809	+		LRK53_RS15405	0.26	+0.0
3,366,809	+		LRK53_RS15405	0.26	-0.9
3,366,809	+		LRK53_RS15405	0.26	-0.4
3,366,809	+		LRK53_RS15405	0.26	-0.2
3,366,809	+		LRK53_RS15405	0.26	+1.1
3,366,810	-		LRK53_RS15405	0.26	-3.0
3,366,810	-		LRK53_RS15405	0.26	+0.4
3,366,810	-		LRK53_RS15405	0.26	-1.3
3,366,810	-		LRK53_RS15405	0.26	+0.1
3,366,810	-		LRK53_RS15405	0.26	-0.1
3,366,810	-		LRK53_RS15405	0.26	-0.1
3,366,810	-		LRK53_RS15405	0.26	-1.2
3,366,861	-		LRK53_RS15405	0.30	+0.4
3,366,863	+		LRK53_RS15405	0.31	-0.6
3,366,864	-		LRK53_RS15405	0.31	-0.9
3,366,864	-		LRK53_RS15405	0.31	-0.3
3,366,864	-		LRK53_RS15405	0.31	+2.1
3,366,864	-		LRK53_RS15405	0.31	+0.2
3,366,864	-		LRK53_RS15405	0.31	+0.1
3,366,887	+		LRK53_RS15405	0.33	-0.1
3,366,887	+		LRK53_RS15405	0.33	-0.8
3,366,887	+		LRK53_RS15405	0.33	-1.3
3,366,887	+		LRK53_RS15405	0.33	-0.0
3,366,887	+		LRK53_RS15405	0.33	-1.8
3,366,888	-		LRK53_RS15405	0.33	+0.2
3,366,888	-		LRK53_RS15405	0.33	+1.1
3,366,888	-		LRK53_RS15405	0.33	-2.0
3,366,977	+		LRK53_RS15405	0.41	-0.4
3,366,977	+		LRK53_RS15405	0.41	-0.3
3,366,977	+		LRK53_RS15405	0.41	+1.3
3,366,977	+		LRK53_RS15405	0.41	+0.4
3,366,977	+		LRK53_RS15405	0.41	-0.6
3,366,977	+		LRK53_RS15405	0.41	-0.2
3,366,977	+		LRK53_RS15405	0.41	+0.5
3,366,977	+		LRK53_RS15405	0.41	-0.4
3,366,977	+		LRK53_RS15405	0.41	-0.6
3,366,977	+		LRK53_RS15405	0.41	+0.4
3,366,977	+		LRK53_RS15405	0.41	-1.0
3,366,977	+		LRK53_RS15405	0.41	+2.4
3,366,978	-		LRK53_RS15405	0.41	+1.2
3,366,978	-		LRK53_RS15405	0.41	-0.0
3,366,978	-		LRK53_RS15405	0.41	-1.8
3,366,978	-		LRK53_RS15405	0.41	-1.0
3,366,978	-		LRK53_RS15405	0.41	-0.6
3,366,978	-		LRK53_RS15405	0.41	-0.6
3,366,978	-		LRK53_RS15405	0.41	-0.8
3,366,978	-		LRK53_RS15405	0.41	-0.2
3,366,978	-		LRK53_RS15405	0.41	-0.6
3,366,980	+		LRK53_RS15405	0.42	+0.9
3,366,980	+		LRK53_RS15405	0.42	-0.5
3,366,981	-		LRK53_RS15405	0.42	-1.2
3,366,981	-		LRK53_RS15405	0.42	-0.5
3,367,028	+		LRK53_RS15405	0.46	+1.1
3,367,028	+		LRK53_RS15405	0.46	-1.7
3,367,028	+		LRK53_RS15405	0.46	-1.1
3,367,029	-		LRK53_RS15405	0.46	-1.3
3,367,029	-		LRK53_RS15405	0.46	-0.6
3,367,038	-		LRK53_RS15405	0.47	+0.7
3,367,175	+		LRK53_RS15405	0.60	-2.7
3,367,175	+		LRK53_RS15405	0.60	-0.1
3,367,175	+		LRK53_RS15405	0.60	+0.0
3,367,175	+		LRK53_RS15405	0.60	-0.1
3,367,175	+		LRK53_RS15405	0.60	+1.8
3,367,175	+		LRK53_RS15405	0.60	+0.1
3,367,175	+		LRK53_RS15405	0.60	-1.2
3,367,175	+		LRK53_RS15405	0.60	-0.1
3,367,175	+		LRK53_RS15405	0.60	-1.4
3,367,176	-		LRK53_RS15405	0.60	-0.2
3,367,176	-		LRK53_RS15405	0.60	-1.1
3,367,176	-		LRK53_RS15405	0.60	-1.1
3,367,176	-		LRK53_RS15405	0.60	-0.2
3,367,176	-		LRK53_RS15405	0.60	-0.5
3,367,176	-		LRK53_RS15405	0.60	-0.5
3,367,176	-		LRK53_RS15405	0.60	-2.1
3,367,176	-		LRK53_RS15405	0.60	-0.7
3,367,232	+		LRK53_RS15405	0.65	-0.1
3,367,232	+		LRK53_RS15405	0.65	-0.8
3,367,232	+		LRK53_RS15405	0.65	-0.1
3,367,233	-		LRK53_RS15405	0.65	-1.4
3,367,233	-		LRK53_RS15405	0.65	-0.3
3,367,319	+		LRK53_RS15405	0.74	-0.5
3,367,319	+		LRK53_RS15405	0.74	-0.8
3,367,319	+		LRK53_RS15405	0.74	-0.1
3,367,418	+		LRK53_RS15405	0.83	-1.0
3,367,418	+		LRK53_RS15405	0.83	+1.1
3,367,419	-		LRK53_RS15405	0.83	+0.3
3,367,419	-		LRK53_RS15405	0.83	-1.4
3,367,424	+		LRK53_RS15405	0.83	-1.2
3,367,424	+		LRK53_RS15405	0.83	-1.0
3,367,424	+		LRK53_RS15405	0.83	-0.5
3,367,424	+		LRK53_RS15405	0.83	-1.5
3,367,424	+		LRK53_RS15405	0.83	+0.1
3,367,425	-		LRK53_RS15405	0.84	-0.7
3,367,425	-		LRK53_RS15405	0.84	+0.7
3,367,425	-		LRK53_RS15405	0.84	-1.7
3,367,756	+		LRK53_RS15410	0.16	-1.9
3,367,757	-		LRK53_RS15410	0.16	+0.4
3,367,757	-		LRK53_RS15410	0.16	+0.3
3,367,831	+		LRK53_RS15410	0.24	+0.1
3,367,831	+		LRK53_RS15410	0.24	-1.3
3,367,831	+		LRK53_RS15410	0.24	-0.3
3,367,831	+		LRK53_RS15410	0.24	-1.1
3,367,831	+		LRK53_RS15410	0.24	+0.4
3,367,832	-		LRK53_RS15410	0.24	-0.4
3,367,832	-		LRK53_RS15410	0.24	-0.0
3,367,832	-		LRK53_RS15410	0.24	-1.0
3,367,832	-		LRK53_RS15410	0.24	-0.1
3,367,832	-		LRK53_RS15410	0.24	-0.1
3,367,894	+		LRK53_RS15410	0.31	-1.2
3,367,895	-		LRK53_RS15410	0.31	-0.5
3,367,895	-		LRK53_RS15410	0.31	-1.3
3,367,895	-		LRK53_RS15410	0.31	+0.2
3,367,912	+		LRK53_RS15410	0.33	+0.7
3,367,912	+		LRK53_RS15410	0.33	-1.5
3,367,995	-		LRK53_RS15410	0.42	-1.0
3,368,029	+		LRK53_RS15410	0.46	-2.1
3,368,029	+		LRK53_RS15410	0.46	-2.1
3,368,029	+		LRK53_RS15410	0.46	-1.6
3,368,029	+		LRK53_RS15410	0.46	+0.1
3,368,029	+		LRK53_RS15410	0.46	+0.4
3,368,029	+		LRK53_RS15410	0.46	-1.2
3,368,029	+		LRK53_RS15410	0.46	-1.1
3,368,029	+		LRK53_RS15410	0.46	-0.1
3,368,029	+		LRK53_RS15410	0.46	-0.7
3,368,029	+		LRK53_RS15410	0.46	-1.8
3,368,029	+		LRK53_RS15410	0.46	+0.4
3,368,029	+		LRK53_RS15410	0.46	+1.0
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3,368,030	-		LRK53_RS15410	0.46	+1.7
3,368,030	-		LRK53_RS15410	0.46	-1.3
3,368,065	+		LRK53_RS15410	0.50	-1.0
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3,368,125	+		LRK53_RS15410	0.56	-1.1
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3,368,126	-		LRK53_RS15410	0.56	-2.1
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3,368,146	+		LRK53_RS15410	0.59	-1.1
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3,368,146	+		LRK53_RS15410	0.59	-0.1
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3,368,147	-		LRK53_RS15410	0.59	-0.6
3,368,147	-		LRK53_RS15410	0.59	+0.2
3,368,147	-		LRK53_RS15410	0.59	-1.9
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3,368,458	+				-0.2
3,368,458	+				+0.7
3,368,458	+				+2.2
3,368,458	+				-0.5
3,368,458	+				+0.1
3,368,458	+				+0.0
3,368,458	+				+0.4
3,368,458	+				-1.4
3,368,459	-				-0.2
3,368,459	-				-0.1
3,368,459	-				+0.8
3,368,459	-				-0.6
3,368,459	-				-1.3