Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11245

Experiment: Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM
2,510,048	-				-1.7
2,510,053	+				+1.3
2,510,053	+				-1.0
2,510,053	+				-0.9
2,510,053	+				-0.2
2,510,053	+				+2.4
2,510,053	+				-0.2
2,510,053	+				-1.5
2,510,053	+				-2.3
2,510,053	+				-0.1
2,510,053	+				-0.4
2,510,053	+				-1.1
2,510,053	+				+0.3
2,510,053	+				-1.3
2,510,053	+				-0.5
2,510,053	+				-0.4
2,510,053	+				-1.4
2,510,053	+				+0.6
2,510,053	+				-0.8
2,510,053	+				-0.4
2,510,053	+				-0.5
2,510,053	+				+0.9
2,510,053	+				-0.6
2,510,053	+				+0.6
2,510,053	+				+1.5
2,510,053	+				-0.4
2,510,053	+				+1.2
2,510,053	+				-0.8
2,510,053	+				-0.6
2,510,053	+				-1.8
2,510,053	+				+1.0
2,510,053	+				+0.6
2,510,053	+				-1.5
2,510,053	+				-0.8
2,510,053	+				-3.2
2,510,053	+				+0.9
2,510,053	+				-0.5
2,510,053	+				-2.1
2,510,053	+				-1.3
2,510,053	+				+0.9
2,510,053	+				-1.1
2,510,053	+				+1.3
2,510,053	+				+0.3
2,510,053	+				-1.2
2,510,053	+				-0.9
2,510,053	+				-1.1
2,510,053	+				-1.8
2,510,053	+				+0.7
2,510,053	+				-0.5
2,510,053	+				-0.9
2,510,053	-				-0.2
2,510,054	-				+0.9
2,510,054	-				+2.4
2,510,054	-				-0.9
2,510,054	-				+0.0
2,510,054	-				-0.4
2,510,054	-				-1.9
2,510,054	-				+0.6
2,510,054	-				-0.0
2,510,054	-				-1.3
2,510,054	-				-0.7
2,510,054	-				-2.1
2,510,054	-				-1.2
2,510,054	-				-1.9
2,510,054	-				-1.1
2,510,054	-				+1.5
2,510,054	-				-2.4
2,510,054	-				+0.8
2,510,054	-				+0.0
2,510,054	-				+2.1
2,510,054	-				+1.0
2,510,054	-				-1.6
2,510,054	-				-2.4
2,510,054	-				-1.4
2,510,054	-				+0.0
2,510,054	-				-0.1
2,510,054	-				+0.0
2,510,054	-				-0.7
2,510,054	-				+1.6
2,510,054	-				+0.4
2,510,054	-				-1.1
2,510,054	-				+0.3
2,510,054	-				-2.5
2,510,054	-				+0.0
2,510,054	-				-1.2
2,510,054	-				-0.8
2,510,054	-				-0.7
2,510,054	-				-2.0
2,510,054	-				-0.9
2,510,054	-				+1.0
2,510,054	-				-0.8
2,510,054	-				+0.4
2,510,054	-				+0.3
2,510,098	-				+1.6
2,510,302	+		LRK53_RS11240	0.30	-0.4
2,510,302	+		LRK53_RS11240	0.30	+0.0
2,510,302	+		LRK53_RS11240	0.30	-0.7
2,510,302	+		LRK53_RS11240	0.30	-1.0
2,510,302	+		LRK53_RS11240	0.30	-1.6
2,510,302	+		LRK53_RS11240	0.30	+0.6
2,510,302	+		LRK53_RS11240	0.30	+0.4
2,510,302	+		LRK53_RS11240	0.30	-1.1
2,510,302	+		LRK53_RS11240	0.30	-1.2
2,510,302	+		LRK53_RS11240	0.30	-1.8
2,510,302	+		LRK53_RS11240	0.30	+0.4
2,510,303	-		LRK53_RS11240	0.30	-0.0
2,510,303	-		LRK53_RS11240	0.30	-1.3
2,510,303	-		LRK53_RS11240	0.30	-1.6
2,510,303	-		LRK53_RS11240	0.30	-1.2
2,510,303	-		LRK53_RS11240	0.30	-1.3
2,510,378	+		LRK53_RS11240	0.40	+0.0
2,510,378	+		LRK53_RS11240	0.40	-0.6
2,510,378	+		LRK53_RS11240	0.40	-0.2
2,510,378	+		LRK53_RS11240	0.40	-0.3
2,510,379	-		LRK53_RS11240	0.40	-0.3
2,510,379	-		LRK53_RS11240	0.40	+1.8
2,510,379	-		LRK53_RS11240	0.40	+1.1
2,510,379	-		LRK53_RS11240	0.40	-0.4
2,510,379	-		LRK53_RS11240	0.40	-0.4
2,510,379	-		LRK53_RS11240	0.40	+1.8
2,510,413	+		LRK53_RS11240	0.45	-1.6
2,510,413	+		LRK53_RS11240	0.45	-2.4
2,510,413	+		LRK53_RS11240	0.45	-0.3
2,510,414	-		LRK53_RS11240	0.45	-0.1
2,510,414	-		LRK53_RS11240	0.45	-0.2
2,510,414	-		LRK53_RS11240	0.45	-0.2
2,510,562	+		LRK53_RS11240	0.66	+0.2
2,510,562	+		LRK53_RS11240	0.66	-0.4
2,510,562	+		LRK53_RS11240	0.66	-0.6
2,510,563	-		LRK53_RS11240	0.66	-1.0
2,510,563	-		LRK53_RS11240	0.66	+0.2
2,510,563	-		LRK53_RS11240	0.66	-0.9
2,510,563	-		LRK53_RS11240	0.66	-1.5
2,510,583	+		LRK53_RS11240	0.69	-1.6
2,510,583	+		LRK53_RS11240	0.69	-0.2
2,510,584	-		LRK53_RS11240	0.69	-2.1
2,510,584	-		LRK53_RS11240	0.69	+0.3
2,510,584	-		LRK53_RS11240	0.69	-0.3
2,510,657	-		LRK53_RS11240	0.79	+0.3
2,510,662	+		LRK53_RS11240	0.80	-0.4
2,510,662	+		LRK53_RS11240	0.80	-1.7
2,510,662	+		LRK53_RS11240	0.80	-0.2
2,510,662	+		LRK53_RS11240	0.80	-1.0
2,510,662	+		LRK53_RS11240	0.80	-1.3
2,510,663	-		LRK53_RS11240	0.80	-0.1
2,510,903	+				-0.4
2,510,903	+				-0.4
2,510,903	+				-0.6
2,510,903	+				-1.5
2,510,903	+				+1.3
2,510,904	-				-0.5
2,510,904	-				+0.4
2,510,949	+				-3.3
2,510,949	+				-2.3
2,510,949	+				+0.1
2,510,949	+				-0.1
2,510,949	+				-1.0
2,510,949	+				+2.9
2,510,949	+				-1.8
2,510,949	+				-1.9
2,510,949	+				+1.2
2,510,949	+				+0.3
2,510,949	+				+0.2
2,510,949	+				-1.0
2,510,949	+				-2.1
2,510,949	+				+0.3
2,510,949	+				-0.2
2,510,949	+				-0.7
2,510,949	+				-3.6
2,510,950	-				+0.2
2,510,950	-				+0.7
2,510,950	-				-0.4
2,510,950	-				-1.2
2,510,950	-				-0.2
2,510,950	-				-1.0
2,510,950	-				-1.0
2,510,950	-				-1.7
2,510,950	-				-0.4
2,510,950	-				-0.9
2,510,950	-				-1.3
2,510,950	-				+0.6
2,510,950	-				-1.1
2,510,950	-				+0.7
2,510,950	-				-0.7
2,511,008	+				-0.6
2,511,046	+				+0.5
2,511,047	-				-2.2
2,511,047	-				-0.7
2,511,047	-				-1.1
2,511,070	+		LRK53_RS11245	0.12	-1.6
2,511,070	+		LRK53_RS11245	0.12	+0.6
2,511,070	+		LRK53_RS11245	0.12	-1.0
2,511,070	+		LRK53_RS11245	0.12	+0.2
2,511,071	-		LRK53_RS11245	0.12	-0.5
2,511,071	-		LRK53_RS11245	0.12	-2.1
2,511,071	-		LRK53_RS11245	0.12	-1.3
2,511,071	-		LRK53_RS11245	0.12	-1.6
2,511,355	+		LRK53_RS11245	0.38	-1.3
2,511,355	+		LRK53_RS11245	0.38	-0.4
2,511,355	+		LRK53_RS11245	0.38	-0.3
2,511,356	-		LRK53_RS11245	0.38	+2.2
2,511,356	-		LRK53_RS11245	0.38	-1.8
2,511,356	-		LRK53_RS11245	0.38	-0.4
2,511,356	-		LRK53_RS11245	0.38	-0.2
2,511,439	+		LRK53_RS11245	0.46	+0.3
2,511,440	-		LRK53_RS11245	0.46	+0.7
2,511,440	-		LRK53_RS11245	0.46	+2.6
2,511,440	-		LRK53_RS11245	0.46	+0.0
2,511,460	+		LRK53_RS11245	0.48	+0.5
2,511,461	-		LRK53_RS11245	0.48	+0.7
2,511,479	+		LRK53_RS11245	0.50	+0.0
2,511,480	-		LRK53_RS11245	0.50	-0.0
2,511,480	-		LRK53_RS11245	0.50	-0.3
2,511,503	-		LRK53_RS11245	0.52	+0.6
2,511,503	-		LRK53_RS11245	0.52	-0.4
2,511,688	+		LRK53_RS11245	0.69	+0.4
2,511,689	-		LRK53_RS11245	0.69	+0.3
2,511,788	+		LRK53_RS11245	0.78	-2.0
2,511,788	+		LRK53_RS11245	0.78	+0.6
2,511,789	-		LRK53_RS11245	0.78	+0.5
2,511,789	-		LRK53_RS11245	0.78	-1.6
2,511,789	-		LRK53_RS11245	0.78	-2.3
2,511,832	+		LRK53_RS11245	0.82	-0.7
2,511,833	-		LRK53_RS11245	0.83	-1.1
2,511,833	-		LRK53_RS11245	0.83	-0.5
2,511,833	-		LRK53_RS11245	0.83	-0.8
2,512,068	+				-0.4
2,512,068	+				+0.0
2,512,068	+				-1.0
2,512,068	+				-1.5
2,512,068	+				+0.3
2,512,069	-				-1.6
2,512,069	-				+0.4
2,512,069	-				-0.8
2,512,167	+		LRK53_RS11250	0.20	+1.9
2,512,167	+		LRK53_RS11250	0.20	+1.3
2,512,167	+		LRK53_RS11250	0.20	-1.2
2,512,167	+		LRK53_RS11250	0.20	-0.7
2,512,167	+		LRK53_RS11250	0.20	-0.5
2,512,167	+		LRK53_RS11250	0.20	-1.0
2,512,167	+		LRK53_RS11250	0.20	-1.0
2,512,167	+		LRK53_RS11250	0.20	-0.5
2,512,167	+		LRK53_RS11250	0.20	-1.4
2,512,167	+		LRK53_RS11250	0.20	-0.9
2,512,167	+		LRK53_RS11250	0.20	-0.4
2,512,167	+		LRK53_RS11250	0.20	-2.2
2,512,167	+		LRK53_RS11250	0.20	-0.5
2,512,167	+		LRK53_RS11250	0.20	-1.6
2,512,167	+		LRK53_RS11250	0.20	+0.5
2,512,167	+		LRK53_RS11250	0.20	-1.1
2,512,167	+		LRK53_RS11250	0.20	-0.2
2,512,167	+		LRK53_RS11250	0.20	-0.7
2,512,167	+		LRK53_RS11250	0.20	-0.4
2,512,167	+		LRK53_RS11250	0.20	+0.1
2,512,167	+		LRK53_RS11250	0.20	-2.2
2,512,167	+		LRK53_RS11250	0.20	-1.0
2,512,167	+		LRK53_RS11250	0.20	+0.0
2,512,167	+		LRK53_RS11250	0.20	-1.4
2,512,167	+		LRK53_RS11250	0.20	-2.6
2,512,167	+		LRK53_RS11250	0.20	+0.0
2,512,167	+		LRK53_RS11250	0.20	+0.6
2,512,167	+		LRK53_RS11250	0.20	-0.5
2,512,167	+		LRK53_RS11250	0.20	-0.2
2,512,167	+		LRK53_RS11250	0.20	-0.5
2,512,167	+		LRK53_RS11250	0.20	-0.7
2,512,168	-		LRK53_RS11250	0.21	-0.5
2,512,168	-		LRK53_RS11250	0.21	-0.1
2,512,168	-		LRK53_RS11250	0.21	-0.4
2,512,168	-		LRK53_RS11250	0.21	+0.3
2,512,168	-		LRK53_RS11250	0.21	-0.9
2,512,168	-		LRK53_RS11250	0.21	+0.0
2,512,168	-		LRK53_RS11250	0.21	-0.5
2,512,168	-		LRK53_RS11250	0.21	-2.1
2,512,168	-		LRK53_RS11250	0.21	-0.9
2,512,168	-		LRK53_RS11250	0.21	-0.3
2,512,168	-		LRK53_RS11250	0.21	-0.5
2,512,168	-		LRK53_RS11250	0.21	+2.2
2,512,168	-		LRK53_RS11250	0.21	+0.3
2,512,168	-		LRK53_RS11250	0.21	-2.3
2,512,168	-		LRK53_RS11250	0.21	-0.4
2,512,168	-		LRK53_RS11250	0.21	-1.8
2,512,168	-		LRK53_RS11250	0.21	+0.9
2,512,168	-		LRK53_RS11250	0.21	-1.3
2,512,168	-		LRK53_RS11250	0.21	-1.3
2,512,168	-		LRK53_RS11250	0.21	-1.4
2,512,168	-		LRK53_RS11250	0.21	-1.0
2,512,168	-		LRK53_RS11250	0.21	-0.4
2,512,233	+		LRK53_RS11250	0.30	+0.0
2,512,234	-		LRK53_RS11250	0.30	+0.8
2,512,234	-		LRK53_RS11250	0.30	-0.7
2,512,239	+		LRK53_RS11250	0.30	-0.5
2,512,239	+		LRK53_RS11250	0.30	-1.3
2,512,290	+		LRK53_RS11250	0.37	+1.3
2,512,290	+		LRK53_RS11250	0.37	-1.6
2,512,290	+		LRK53_RS11250	0.37	+0.4
2,512,290	+		LRK53_RS11250	0.37	+0.0
2,512,290	+		LRK53_RS11250	0.37	-0.2
2,512,428	+		LRK53_RS11250	0.56	-1.0
2,512,428	+		LRK53_RS11250	0.56	-2.5
2,512,429	-		LRK53_RS11250	0.56	-1.1
2,512,429	-		LRK53_RS11250	0.56	+0.5
2,512,443	+		LRK53_RS11250	0.58	-1.1
2,512,443	+		LRK53_RS11250	0.58	-2.3
2,512,443	+		LRK53_RS11250	0.58	-0.2
2,512,443	+		LRK53_RS11250	0.58	-1.2
2,512,443	+		LRK53_RS11250	0.58	-1.8
2,512,444	-		LRK53_RS11250	0.58	-1.0
2,512,444	-		LRK53_RS11250	0.58	-1.1
2,512,444	-		LRK53_RS11250	0.58	-1.1
2,512,444	-		LRK53_RS11250	0.58	+0.3
2,512,444	-		LRK53_RS11250	0.58	+0.6
2,512,444	-		LRK53_RS11250	0.58	-1.7
2,512,467	+		LRK53_RS11250	0.61	-1.2
2,512,467	+		LRK53_RS11250	0.61	+0.7
2,512,467	+		LRK53_RS11250	0.61	+0.6
2,512,468	-		LRK53_RS11250	0.62	-1.6
2,512,468	-		LRK53_RS11250	0.62	-0.7
2,512,468	-		LRK53_RS11250	0.62	-2.4
2,512,468	-		LRK53_RS11250	0.62	-0.2
2,512,468	-		LRK53_RS11250	0.62	-0.2
2,512,715	+				+0.0
2,512,716	-				-0.7
2,512,716	-				-1.6
2,512,991	+		LRK53_RS11255	0.37	-0.4
2,512,992	-		LRK53_RS11255	0.38	-2.7