Strain Fitness in Rhodanobacter sp000427505 FW510-R12

Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08055

Experiment: Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM
				remove
1,807,303	+			-1.4
1,807,303	+			-0.5
1,807,303	+			-2.5
1,807,304	-			-1.5
1,807,304	-			+0.9
1,807,312	+			-0.3
1,807,312	+			-0.3
1,807,312	+			+1.2
1,807,312	+			-2.2
1,807,312	+			-0.7
1,807,312	+			+1.7
1,807,312	+			-1.8
1,807,312	+			-1.2
1,807,312	+			-1.5
1,807,312	+			+0.9
1,807,313	-			-1.2
1,807,313	-			-0.9
1,807,313	-			-2.2
1,807,313	-			+0.2
1,807,313	-			-0.8
1,807,313	-			-1.1
1,807,397	+			-0.8
1,807,397	+			-1.9
1,807,397	+			-1.7
1,807,397	+			+0.1
1,807,397	+			-0.3
1,807,397	+			-0.3
1,807,397	+			-0.7
1,807,397	+			-2.1
1,807,397	+			+0.9
1,807,397	+			-2.6
1,807,397	+			-1.6
1,807,397	+			-0.8
1,807,397	+			-0.3
1,807,398	-			-1.4
1,807,398	-			-1.3
1,807,398	-			-0.9
1,807,398	-			-1.7
1,807,398	-			+0.2
1,807,398	-			+0.5
1,807,398	-			-0.1
1,807,398	-			-1.9
1,807,398	-			+0.6
1,807,398	-			-1.6
1,807,398	-			-1.0
1,807,668	+	LRK53_RS08050	0.65	-1.2
1,807,669	-	LRK53_RS08050	0.66	+0.1
1,808,183	+	LRK53_RS08055	0.16	-2.3
1,808,183	+	LRK53_RS08055	0.16	-0.9
1,808,314	+	LRK53_RS08055	0.23	-0.1
1,808,344	+	LRK53_RS08055	0.25	-2.5
1,808,344	+	LRK53_RS08055	0.25	-0.8
1,808,344	+	LRK53_RS08055	0.25	-0.2
1,808,344	+	LRK53_RS08055	0.25	-2.2
1,808,344	+	LRK53_RS08055	0.25	-0.6
1,808,344	+	LRK53_RS08055	0.25	+0.3
1,808,344	+	LRK53_RS08055	0.25	+0.3
1,808,344	+	LRK53_RS08055	0.25	-0.1
1,808,344	+	LRK53_RS08055	0.25	-0.7
1,808,344	+	LRK53_RS08055	0.25	-1.8
1,808,344	+	LRK53_RS08055	0.25	-2.5
1,808,344	+	LRK53_RS08055	0.25	+0.9
1,808,345	-	LRK53_RS08055	0.25	-1.7
1,808,345	-	LRK53_RS08055	0.25	-0.3
1,808,345	-	LRK53_RS08055	0.25	-1.5
1,808,345	-	LRK53_RS08055	0.25	-0.7
1,808,345	-	LRK53_RS08055	0.25	-0.1
1,808,345	-	LRK53_RS08055	0.25	+0.3
1,808,345	-	LRK53_RS08055	0.25	+0.7
1,808,345	-	LRK53_RS08055	0.25	-3.3
1,808,345	-	LRK53_RS08055	0.25	-2.1
1,808,345	-	LRK53_RS08055	0.25	+0.6
1,808,345	-	LRK53_RS08055	0.25	-2.1
1,808,345	-	LRK53_RS08055	0.25	-0.7
1,808,345	-	LRK53_RS08055	0.25	-2.3
1,808,345	-	LRK53_RS08055	0.25	-0.8
1,808,345	-	LRK53_RS08055	0.25	-0.1
1,808,350	+	LRK53_RS08055	0.25	+0.3
1,808,389	+	LRK53_RS08055	0.27	-0.6
1,808,389	+	LRK53_RS08055	0.27	-1.3
1,808,389	+	LRK53_RS08055	0.27	+0.1
1,808,389	+	LRK53_RS08055	0.27	-1.3
1,808,389	+	LRK53_RS08055	0.27	-1.0
1,808,389	+	LRK53_RS08055	0.27	-2.0
1,808,389	+	LRK53_RS08055	0.27	+0.7
1,808,389	+	LRK53_RS08055	0.27	+0.8
1,808,389	+	LRK53_RS08055	0.27	-2.2
1,808,389	+	LRK53_RS08055	0.27	-0.5
1,808,389	+	LRK53_RS08055	0.27	-1.6
1,808,390	-	LRK53_RS08055	0.28	+0.2
1,808,390	-	LRK53_RS08055	0.28	+0.3
1,808,390	-	LRK53_RS08055	0.28	-0.5
1,808,390	-	LRK53_RS08055	0.28	+0.0
1,808,390	-	LRK53_RS08055	0.28	+0.9
1,808,390	-	LRK53_RS08055	0.28	-0.1
1,808,390	-	LRK53_RS08055	0.28	+0.7
1,808,446	+	LRK53_RS08055	0.31	+0.7
1,808,446	+	LRK53_RS08055	0.31	-0.7
1,808,446	+	LRK53_RS08055	0.31	-0.3
1,808,447	-	LRK53_RS08055	0.31	+0.9
1,808,447	-	LRK53_RS08055	0.31	+0.5
1,808,494	+	LRK53_RS08055	0.33	+0.3
1,808,494	+	LRK53_RS08055	0.33	+0.6
1,808,494	+	LRK53_RS08055	0.33	-1.2
1,808,494	+	LRK53_RS08055	0.33	-0.1
1,808,494	+	LRK53_RS08055	0.33	+1.9
1,808,494	+	LRK53_RS08055	0.33	-0.5
1,808,494	+	LRK53_RS08055	0.33	-0.7
1,808,495	-	LRK53_RS08055	0.34	+0.2
1,808,495	-	LRK53_RS08055	0.34	-2.0
1,808,495	-	LRK53_RS08055	0.34	-1.5
1,808,495	-	LRK53_RS08055	0.34	-0.1
1,808,495	-	LRK53_RS08055	0.34	-2.5
1,808,495	-	LRK53_RS08055	0.34	-2.8
1,808,495	-	LRK53_RS08055	0.34	-0.1
1,808,521	+	LRK53_RS08055	0.35	+0.1
1,808,521	+	LRK53_RS08055	0.35	-0.7
1,808,522	-	LRK53_RS08055	0.35	-0.3
1,808,522	-	LRK53_RS08055	0.35	-2.7
1,808,522	-	LRK53_RS08055	0.35	-1.6
1,808,522	-	LRK53_RS08055	0.35	-1.4
1,808,522	-	LRK53_RS08055	0.35	+0.3
1,808,524	+	LRK53_RS08055	0.35	-0.2
1,808,524	+	LRK53_RS08055	0.35	-0.2
1,808,524	+	LRK53_RS08055	0.35	-1.6
1,808,524	+	LRK53_RS08055	0.35	-1.7
1,808,524	+	LRK53_RS08055	0.35	-1.0
1,808,525	-	LRK53_RS08055	0.35	-1.7
1,808,525	-	LRK53_RS08055	0.35	-0.5
1,808,659	+	LRK53_RS08055	0.43	+0.7
1,808,660	-	LRK53_RS08055	0.43	-2.0
1,808,661	+	LRK53_RS08055	0.43	-2.1
1,808,661	+	LRK53_RS08055	0.43	-1.0
1,808,661	+	LRK53_RS08055	0.43	-0.3
1,808,661	+	LRK53_RS08055	0.43	-1.1
1,808,661	+	LRK53_RS08055	0.43	-1.7
1,808,661	+	LRK53_RS08055	0.43	-0.1
1,808,661	+	LRK53_RS08055	0.43	-0.6
1,808,661	+	LRK53_RS08055	0.43	-1.4
1,808,661	+	LRK53_RS08055	0.43	-0.4
1,808,661	+	LRK53_RS08055	0.43	-1.3
1,808,661	+	LRK53_RS08055	0.43	-0.5
1,808,661	+	LRK53_RS08055	0.43	-1.1
1,808,661	+	LRK53_RS08055	0.43	+1.1
1,808,661	+	LRK53_RS08055	0.43	+0.8
1,808,661	+	LRK53_RS08055	0.43	-0.8
1,808,661	+	LRK53_RS08055	0.43	-1.3
1,808,661	+	LRK53_RS08055	0.43	+1.1
1,808,661	+	LRK53_RS08055	0.43	-0.5
1,808,661	+	LRK53_RS08055	0.43	-0.3
1,808,662	-	LRK53_RS08055	0.43	-1.2
1,808,662	-	LRK53_RS08055	0.43	-1.2
1,808,662	-	LRK53_RS08055	0.43	-0.9
1,808,662	-	LRK53_RS08055	0.43	-1.4
1,808,662	-	LRK53_RS08055	0.43	-0.1
1,808,662	-	LRK53_RS08055	0.43	-0.1
1,808,662	-	LRK53_RS08055	0.43	-0.1
1,808,662	-	LRK53_RS08055	0.43	-0.1
1,808,662	-	LRK53_RS08055	0.43	-1.3
1,808,662	-	LRK53_RS08055	0.43	-0.7
1,808,662	-	LRK53_RS08055	0.43	+0.7
1,808,662	-	LRK53_RS08055	0.43	-0.1
1,808,662	-	LRK53_RS08055	0.43	-1.7
1,808,662	-	LRK53_RS08055	0.43	+0.4
1,808,662	-	LRK53_RS08055	0.43	-0.5
1,808,662	-	LRK53_RS08055	0.43	-0.5
1,808,662	-	LRK53_RS08055	0.43	-0.3
1,808,662	-	LRK53_RS08055	0.43	-1.6
1,808,662	-	LRK53_RS08055	0.43	-1.4
1,808,662	-	LRK53_RS08055	0.43	-0.7
1,808,665	+	LRK53_RS08055	0.43	-1.2
1,808,665	+	LRK53_RS08055	0.43	+0.3
1,808,665	+	LRK53_RS08055	0.43	+2.7
1,808,665	+	LRK53_RS08055	0.43	-0.9
1,808,665	+	LRK53_RS08055	0.43	-1.4
1,808,665	+	LRK53_RS08055	0.43	-1.4
1,808,665	+	LRK53_RS08055	0.43	-1.7
1,808,665	+	LRK53_RS08055	0.43	-3.2
1,808,665	+	LRK53_RS08055	0.43	-0.5
1,808,665	+	LRK53_RS08055	0.43	-1.0
1,808,665	+	LRK53_RS08055	0.43	-0.6
1,808,665	+	LRK53_RS08055	0.43	+0.6
1,808,665	+	LRK53_RS08055	0.43	-0.2
1,808,665	+	LRK53_RS08055	0.43	-0.9
1,808,665	+	LRK53_RS08055	0.43	+0.9
1,808,665	+	LRK53_RS08055	0.43	-1.1
1,808,665	+	LRK53_RS08055	0.43	+1.7
1,808,665	+	LRK53_RS08055	0.43	-2.4
1,808,665	+	LRK53_RS08055	0.43	-2.0
1,808,665	+	LRK53_RS08055	0.43	-1.3
1,808,665	+	LRK53_RS08055	0.43	-0.4
1,808,665	+	LRK53_RS08055	0.43	-1.1
1,808,665	+	LRK53_RS08055	0.43	-1.7
1,808,665	+	LRK53_RS08055	0.43	-0.9
1,808,665	+	LRK53_RS08055	0.43	+0.4
1,808,665	+	LRK53_RS08055	0.43	+0.3
1,808,665	+	LRK53_RS08055	0.43	-2.0
1,808,665	+	LRK53_RS08055	0.43	-0.5
1,808,665	+	LRK53_RS08055	0.43	-0.7
1,808,665	+	LRK53_RS08055	0.43	-2.5
1,808,665	+	LRK53_RS08055	0.43	-0.7
1,808,665	+	LRK53_RS08055	0.43	-0.9
1,808,665	+	LRK53_RS08055	0.43	-0.7
1,808,665	+	LRK53_RS08055	0.43	-1.1
1,808,665	+	LRK53_RS08055	0.43	+0.9
1,808,665	+	LRK53_RS08055	0.43	+0.1
1,808,665	+	LRK53_RS08055	0.43	-0.1
1,808,665	+	LRK53_RS08055	0.43	-0.9
1,808,665	+	LRK53_RS08055	0.43	-0.2
1,808,665	+	LRK53_RS08055	0.43	-0.9
1,808,665	+	LRK53_RS08055	0.43	-1.3
1,808,665	+	LRK53_RS08055	0.43	-0.3
1,808,666	-	LRK53_RS08055	0.43	-2.2
1,808,666	-	LRK53_RS08055	0.43	-2.8
1,808,666	-	LRK53_RS08055	0.43	-1.6
1,808,666	-	LRK53_RS08055	0.43	-1.0
1,808,666	-	LRK53_RS08055	0.43	-0.5
1,808,666	-	LRK53_RS08055	0.43	-1.2
1,808,666	-	LRK53_RS08055	0.43	-0.3
1,808,666	-	LRK53_RS08055	0.43	-1.4
1,808,666	-	LRK53_RS08055	0.43	-2.0
1,808,666	-	LRK53_RS08055	0.43	-0.5
1,808,666	-	LRK53_RS08055	0.43	-0.0
1,808,666	-	LRK53_RS08055	0.43	-1.0
1,808,666	-	LRK53_RS08055	0.43	-1.0
1,808,666	-	LRK53_RS08055	0.43	+0.7
1,808,666	-	LRK53_RS08055	0.43	-0.7
1,808,666	-	LRK53_RS08055	0.43	-1.4
1,808,666	-	LRK53_RS08055	0.43	+2.2
1,808,666	-	LRK53_RS08055	0.43	-0.9
1,808,666	-	LRK53_RS08055	0.43	-1.4
1,808,666	-	LRK53_RS08055	0.43	+0.4
1,808,666	-	LRK53_RS08055	0.43	+0.5
1,808,666	-	LRK53_RS08055	0.43	-0.7
1,808,666	-	LRK53_RS08055	0.43	-0.3
1,808,666	-	LRK53_RS08055	0.43	-2.2
1,808,666	-	LRK53_RS08055	0.43	-0.7
1,808,666	-	LRK53_RS08055	0.43	+1.4
1,808,666	-	LRK53_RS08055	0.43	+0.4
1,808,666	-	LRK53_RS08055	0.43	-1.7
1,808,666	-	LRK53_RS08055	0.43	-0.6
1,808,666	-	LRK53_RS08055	0.43	-1.3
1,808,666	-	LRK53_RS08055	0.43	-0.2
1,808,666	-	LRK53_RS08055	0.43	-0.3
1,808,666	-	LRK53_RS08055	0.43	+0.9
1,808,666	-	LRK53_RS08055	0.43	-0.7
1,808,666	-	LRK53_RS08055	0.43	-1.2
1,808,666	-	LRK53_RS08055	0.43	-0.5
1,808,666	-	LRK53_RS08055	0.43	-0.5
1,808,666	-	LRK53_RS08055	0.43	-0.4
1,808,666	-	LRK53_RS08055	0.43	-0.1
1,808,666	-	LRK53_RS08055	0.43	-1.2
1,808,667	+	LRK53_RS08055	0.43	-0.8
1,808,667	+	LRK53_RS08055	0.43	-2.4
1,808,667	+	LRK53_RS08055	0.43	-0.4
1,808,667	+	LRK53_RS08055	0.43	+1.2
1,808,667	+	LRK53_RS08055	0.43	-0.9
1,808,667	+	LRK53_RS08055	0.43	+0.5
1,808,667	+	LRK53_RS08055	0.43	-0.1
1,808,667	+	LRK53_RS08055	0.43	-0.3
1,808,667	+	LRK53_RS08055	0.43	-1.3
1,808,667	+	LRK53_RS08055	0.43	+0.9
1,808,667	+	LRK53_RS08055	0.43	-0.8
1,808,667	+	LRK53_RS08055	0.43	-2.1
1,808,667	+	LRK53_RS08055	0.43	-1.3
1,808,667	+	LRK53_RS08055	0.43	-1.6
1,808,668	-	LRK53_RS08055	0.43	-0.1
1,808,668	-	LRK53_RS08055	0.43	-1.3
1,808,668	-	LRK53_RS08055	0.43	-0.4
1,808,668	-	LRK53_RS08055	0.43	-0.8
1,808,668	-	LRK53_RS08055	0.43	-0.3
1,808,668	-	LRK53_RS08055	0.43	-0.8
1,808,668	-	LRK53_RS08055	0.43	+0.2
1,808,668	-	LRK53_RS08055	0.43	-0.7
1,808,668	-	LRK53_RS08055	0.43	-0.2
1,808,668	-	LRK53_RS08055	0.43	-0.7
1,808,668	-	LRK53_RS08055	0.43	-1.6
1,808,668	-	LRK53_RS08055	0.43	-0.3
1,808,668	-	LRK53_RS08055	0.43	+0.4
1,808,668	-	LRK53_RS08055	0.43	-0.5
1,808,668	-	LRK53_RS08055	0.43	-2.0
1,808,668	-	LRK53_RS08055	0.43	-0.6
1,808,668	-	LRK53_RS08055	0.43	-0.2
1,808,671	+	LRK53_RS08055	0.44	-0.7
1,808,671	+	LRK53_RS08055	0.44	+0.2
1,808,671	+	LRK53_RS08055	0.44	-1.8
1,808,671	+	LRK53_RS08055	0.44	+0.2
1,808,671	+	LRK53_RS08055	0.44	-1.4
1,808,672	-	LRK53_RS08055	0.44	-0.7
1,808,672	-	LRK53_RS08055	0.44	-1.8
1,808,672	-	LRK53_RS08055	0.44	-1.7
1,808,672	-	LRK53_RS08055	0.44	-0.3
1,808,672	-	LRK53_RS08055	0.44	-1.3
1,808,672	-	LRK53_RS08055	0.44	+0.2
1,808,672	-	LRK53_RS08055	0.44	+0.4
1,808,672	-	LRK53_RS08055	0.44	-0.5
1,808,672	-	LRK53_RS08055	0.44	-1.2
1,808,672	-	LRK53_RS08055	0.44	-0.1
1,808,831	+	LRK53_RS08055	0.53	+1.7
1,808,831	+	LRK53_RS08055	0.53	-1.3
1,808,831	+	LRK53_RS08055	0.53	-2.5
1,808,831	+	LRK53_RS08055	0.53	-0.9
1,808,831	+	LRK53_RS08055	0.53	-0.6
1,808,831	+	LRK53_RS08055	0.53	-0.5
1,808,831	+	LRK53_RS08055	0.53	-1.7
1,808,831	+	LRK53_RS08055	0.53	-2.2
1,808,831	+	LRK53_RS08055	0.53	+0.5
1,808,831	+	LRK53_RS08055	0.53	-1.2
1,808,831	+	LRK53_RS08055	0.53	-1.8
1,808,831	+	LRK53_RS08055	0.53	-0.5
1,808,831	+	LRK53_RS08055	0.53	-2.2
1,808,831	+	LRK53_RS08055	0.53	+0.2
1,808,832	-	LRK53_RS08055	0.53	-0.5
1,808,832	-	LRK53_RS08055	0.53	-2.7
1,808,832	-	LRK53_RS08055	0.53	+0.0
1,808,832	-	LRK53_RS08055	0.53	-0.5
1,808,832	-	LRK53_RS08055	0.53	-0.5
1,808,832	-	LRK53_RS08055	0.53	-0.7
1,808,832	-	LRK53_RS08055	0.53	-0.3
1,808,832	-	LRK53_RS08055	0.53	-1.5
1,808,832	-	LRK53_RS08055	0.53	-1.9
1,808,832	-	LRK53_RS08055	0.53	-0.3
1,808,832	-	LRK53_RS08055	0.53	+1.1
1,808,832	-	LRK53_RS08055	0.53	-1.3
1,808,832	-	LRK53_RS08055	0.53	-0.1
1,808,832	-	LRK53_RS08055	0.53	-3.1
1,808,878	+	LRK53_RS08055	0.55	-1.9
1,808,879	-	LRK53_RS08055	0.55	-0.7
1,808,879	-	LRK53_RS08055	0.55	-0.0
1,808,914	+	LRK53_RS08055	0.57	-2.3
1,808,914	+	LRK53_RS08055	0.57	-1.1
1,808,914	+	LRK53_RS08055	0.57	-0.3
1,808,914	+	LRK53_RS08055	0.57	-0.7
1,808,914	+	LRK53_RS08055	0.57	-0.2
1,808,915	-	LRK53_RS08055	0.57	+0.2
1,808,915	-	LRK53_RS08055	0.57	+0.3
1,808,915	-	LRK53_RS08055	0.57	-0.2
1,808,915	-	LRK53_RS08055	0.57	-0.5
1,809,170	-	LRK53_RS08055	0.72	-0.6
1,809,265	+	LRK53_RS08055	0.77	-0.4
1,809,265	+	LRK53_RS08055	0.77	-0.6
1,809,265	+	LRK53_RS08055	0.77	+0.2
1,809,265	+	LRK53_RS08055	0.77	+0.2
1,809,265	+	LRK53_RS08055	0.77	-1.0
1,809,265	+	LRK53_RS08055	0.77	-0.7
1,809,265	+	LRK53_RS08055	0.77	+1.1
1,809,266	-	LRK53_RS08055	0.77	+0.5
1,809,266	-	LRK53_RS08055	0.77	-0.3
1,809,266	-	LRK53_RS08055	0.77	-1.4
1,809,266	-	LRK53_RS08055	0.77	-1.3
1,809,266	-	LRK53_RS08055	0.77	-0.9
1,809,266	-	LRK53_RS08055	0.77	-3.3
1,809,266	-	LRK53_RS08055	0.77	-0.0
1,809,266	-	LRK53_RS08055	0.77	-0.0
1,809,266	-	LRK53_RS08055	0.77	+0.9
1,809,266	-	LRK53_RS08055	0.77	-0.0
1,809,382	+	LRK53_RS08055	0.84	-0.5
1,809,382	+	LRK53_RS08055	0.84	-0.2
1,809,382	+	LRK53_RS08055	0.84	-0.8
1,809,383	-	LRK53_RS08055	0.84	-1.7
1,809,383	-	LRK53_RS08055	0.84	+1.1
1,809,565	+			-0.3
1,809,565	+			-1.7
1,809,620	-			+0.3
1,809,620	-			-1.6
1,809,620	-			-0.5
1,809,620	-			+0.8
1,809,620	-			-0.5
1,809,620	-			-0.7
1,809,620	-			-1.3
1,809,620	-			-2.3
1,809,620	-			+0.7
1,809,620	-			-0.4
1,809,620	-			+0.6
1,809,620	-			-2.0
1,809,620	-			+0.7
1,809,620	-			+0.3
1,809,665	+			+2.2
1,809,665	+			-1.0
1,809,665	+			-2.2
1,809,665	+			-1.0
1,809,666	-			-1.8
1,809,666	-			-0.9
1,809,666	-			-0.3
1,809,666	-			+0.6
1,809,666	-			-1.4
1,810,218	+	LRK53_RS08060	0.45	-1.2
1,810,218	+	LRK53_RS08060	0.45	-1.4
1,810,359	+	LRK53_RS08060	0.56	-1.4
1,810,475	+	LRK53_RS08060	0.66	+0.3
1,810,475	+	LRK53_RS08060	0.66	-1.9
1,810,476	-	LRK53_RS08060	0.66	+0.2
1,810,476	-	LRK53_RS08060	0.66	-1.4
1,810,476	-	LRK53_RS08060	0.66	-2.4
1,810,584	+	LRK53_RS08060	0.75	-0.7
1,810,585	-	LRK53_RS08060	0.75	-1.4
1,810,585	-	LRK53_RS08060	0.75	+1.1
1,810,585	-	LRK53_RS08060	0.75	+0.8
1,810,629	+	LRK53_RS08060	0.78	-0.4
1,810,630	-	LRK53_RS08060	0.78	+0.7
1,810,630	-	LRK53_RS08060	0.78	+0.2

Or see this region's nucleotide sequence