Strain Fitness in Escherichia coli ECOR38 around HEPCGN_17800

Experiment: Bas38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas38
2,305,839	-	yqhG	HEPCGN_17795	0.29	-0.2
2,305,861	+	yqhG	HEPCGN_17795	0.31	-0.0
2,305,945	+	yqhG	HEPCGN_17795	0.40	+0.2
2,305,945	+	yqhG	HEPCGN_17795	0.40	-0.5
2,305,948	-	yqhG	HEPCGN_17795	0.41	-0.7
2,306,055	-	yqhG	HEPCGN_17795	0.52	+0.7
2,306,143	+	yqhG	HEPCGN_17795	0.62	+0.5
2,306,144	-	yqhG	HEPCGN_17795	0.62	-0.3
2,306,152	+	yqhG	HEPCGN_17795	0.63	-0.0
2,306,152	+	yqhG	HEPCGN_17795	0.63	+0.8
2,306,219	+	yqhG	HEPCGN_17795	0.70	+2.4
2,306,219	+	yqhG	HEPCGN_17795	0.70	+0.0
2,306,263	-	yqhG	HEPCGN_17795	0.75	-0.9
2,306,279	-	yqhG	HEPCGN_17795	0.76	+0.2
2,306,293	+	yqhG	HEPCGN_17795	0.78	-0.0
2,306,293	+	yqhG	HEPCGN_17795	0.78	-0.2
2,306,367	+	yqhG	HEPCGN_17795	0.86	+0.0
2,306,391	+	yqhG	HEPCGN_17795	0.88	+1.9
2,306,391	+	yqhG	HEPCGN_17795	0.88	-0.5
2,306,401	-	yqhG	HEPCGN_17795	0.90	-2.0
2,306,423	+				+1.1
2,306,423	+				-0.4
2,306,486	+				+1.6
2,306,490	-				-0.0
2,306,534	+				+0.2
2,306,535	-				-0.2
2,306,535	-				-0.1
2,306,535	-				+0.6
2,306,535	-				-0.5
2,306,551	+				-0.2
2,306,612	+				+0.4
2,306,612	+				+0.4
2,306,638	+				+0.1
2,306,638	+				-0.2
2,306,904	-	dkgA	HEPCGN_17800	0.25	+1.1
2,306,959	-	dkgA	HEPCGN_17800	0.32	+0.4
2,307,009	+	dkgA	HEPCGN_17800	0.38	+0.5
2,307,179	-	dkgA	HEPCGN_17800	0.58	+0.4
2,307,179	-	dkgA	HEPCGN_17800	0.58	+0.4
2,307,211	-	dkgA	HEPCGN_17800	0.62	+0.8
2,307,211	-	dkgA	HEPCGN_17800	0.62	-0.0
2,307,226	+	dkgA	HEPCGN_17800	0.64	+0.6
2,307,227	-	dkgA	HEPCGN_17800	0.64	-1.8
2,307,435	+	dkgA	HEPCGN_17800	0.89	-0.3
2,307,446	+				-0.1
2,307,447	-				-1.0
2,307,498	+				+0.5
2,307,503	+				-0.1
2,307,504	-				-1.0
2,307,506	+				+0.5
2,307,524	+				-2.0
2,307,525	-				+0.6
2,307,525	-				+0.7
2,307,525	-				+0.2
2,307,540	-				-0.5
2,307,540	-				+0.2
2,307,540	-				-0.2
2,307,581	+				-0.2
2,307,645	+				+0.3
2,307,645	+				-0.5
2,307,645	+				+0.1
2,307,645	+				-0.1
2,307,646	-				+0.1
2,307,646	-				+1.6
2,307,646	-				-0.5
2,307,647	+				+0.3
2,307,647	+				+0.6
2,307,647	+				+0.5
2,307,649	+				+0.5
2,307,649	+				+1.0
2,307,650	-				+0.3
2,307,650	-				+0.2
2,307,650	-				-0.4
2,307,650	-				+0.2
2,307,650	-				-0.1
2,307,671	-				+0.1
2,307,671	-				-0.7
2,307,757	-	yqhD	HEPCGN_17810	0.11	-0.1
2,307,782	+	yqhD	HEPCGN_17810	0.13	+0.5
2,307,886	+	yqhD	HEPCGN_17810	0.22	+0.6
2,308,081	-	yqhD	HEPCGN_17810	0.39	-0.5
2,308,186	-	yqhD	HEPCGN_17810	0.48	+0.2
2,308,186	-	yqhD	HEPCGN_17810	0.48	+0.2
2,308,202	+	yqhD	HEPCGN_17810	0.49	+0.4
2,308,202	+	yqhD	HEPCGN_17810	0.49	+1.1
2,308,203	-	yqhD	HEPCGN_17810	0.49	+0.1
2,308,203	-	yqhD	HEPCGN_17810	0.49	-0.2
2,308,203	-	yqhD	HEPCGN_17810	0.49	+0.1
2,308,256	-	yqhD	HEPCGN_17810	0.54	+0.1
2,308,412	-	yqhD	HEPCGN_17810	0.67	+2.0
2,308,412	-	yqhD	HEPCGN_17810	0.67	+0.1
2,308,464	+	yqhD	HEPCGN_17810	0.72	+0.0