Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS16110

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS16105 and A4249_RS16110 overlap by 4 nucleotidesA4249_RS16110 and A4249_RS16115 are separated by 232 nucleotides A4249_RS16105: A4249_RS16105 - glutamate synthase large subunit, at 3,242,537 to 3,247,048 _RS16105 A4249_RS16110: A4249_RS16110 - NAD(P)-dependent oxidoreductase, at 3,247,045 to 3,248,472 _RS16110 A4249_RS16115: A4249_RS16115 - membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family, at 3,248,705 to 3,251,116 _RS16115 Position (kb) 3247 3248 3249Strain fitness (log2 ratio) -2 -1 0 1 2at 3246.119 kb on + strand, within A4249_RS16105at 3246.318 kb on + strand, within A4249_RS16105at 3246.319 kb on - strand, within A4249_RS16105at 3246.319 kb on - strand, within A4249_RS16105at 3246.339 kb on + strand, within A4249_RS16105at 3246.340 kb on - strand, within A4249_RS16105at 3246.340 kb on - strand, within A4249_RS16105at 3246.375 kb on + strand, within A4249_RS16105at 3246.376 kb on - strand, within A4249_RS16105at 3246.414 kb on + strand, within A4249_RS16105at 3246.414 kb on + strand, within A4249_RS16105at 3246.414 kb on + strand, within A4249_RS16105at 3246.415 kb on - strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.445 kb on + strand, within A4249_RS16105at 3246.446 kb on - strand, within A4249_RS16105at 3246.446 kb on - strand, within A4249_RS16105at 3246.446 kb on - strand, within A4249_RS16105at 3246.446 kb on - strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.447 kb on + strand, within A4249_RS16105at 3246.448 kb on - strand, within A4249_RS16105at 3246.448 kb on - strand, within A4249_RS16105at 3246.448 kb on - strand, within A4249_RS16105at 3246.504 kb on + strand, within A4249_RS16105at 3246.504 kb on + strand, within A4249_RS16105at 3246.504 kb on + strand, within A4249_RS16105at 3246.504 kb on + strand, within A4249_RS16105at 3246.504 kb on + strand, within A4249_RS16105at 3246.504 kb on + strand, within A4249_RS16105at 3246.504 kb on + strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.505 kb on - strand, within A4249_RS16105at 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.651 kb on + strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.652 kb on - strandat 3246.906 kb on + strandat 3246.906 kb on + strandat 3246.906 kb on + strandat 3246.990 kb on + strandat 3246.991 kb on - strandat 3247.029 kb on + strandat 3247.030 kb on - strandat 3247.030 kb on - strandat 3247.030 kb on - strandat 3247.030 kb on - strandat 3247.079 kb on + strandat 3247.079 kb on + strandat 3247.080 kb on - strandat 3247.518 kb on - strand, within A4249_RS16110at 3247.518 kb on - strand, within A4249_RS16110at 3247.518 kb on - strand, within A4249_RS16110at 3247.676 kb on + strand, within A4249_RS16110at 3247.676 kb on + strand, within A4249_RS16110at 3247.676 kb on + strand, within A4249_RS16110at 3247.676 kb on + strand, within A4249_RS16110at 3247.677 kb on - strand, within A4249_RS16110at 3247.677 kb on - strand, within A4249_RS16110at 3247.677 kb on - strand, within A4249_RS16110at 3247.677 kb on - strand, within A4249_RS16110at 3247.677 kb on - strand, within A4249_RS16110at 3247.677 kb on - strand, within A4249_RS16110at 3247.739 kb on + strand, within A4249_RS16110at 3247.740 kb on - strand, within A4249_RS16110at 3247.749 kb on + strand, within A4249_RS16110at 3247.780 kb on + strand, within A4249_RS16110at 3247.780 kb on + strand, within A4249_RS16110at 3247.780 kb on + strand, within A4249_RS16110at 3247.780 kb on + strand, within A4249_RS16110at 3247.781 kb on - strand, within A4249_RS16110at 3247.781 kb on - strand, within A4249_RS16110at 3247.904 kb on + strand, within A4249_RS16110at 3247.904 kb on + strand, within A4249_RS16110at 3247.904 kb on + strand, within A4249_RS16110at 3247.905 kb on - strand, within A4249_RS16110at 3247.905 kb on - strand, within A4249_RS16110at 3247.905 kb on - strand, within A4249_RS16110at 3247.905 kb on - strand, within A4249_RS16110at 3247.940 kb on + strand, within A4249_RS16110at 3247.941 kb on - strand, within A4249_RS16110at 3247.941 kb on - strand, within A4249_RS16110at 3247.941 kb on - strand, within A4249_RS16110at 3247.941 kb on - strand, within A4249_RS16110at 3247.941 kb on - strand, within A4249_RS16110at 3247.955 kb on + strand, within A4249_RS16110at 3247.956 kb on - strand, within A4249_RS16110at 3248.466 kb on + strandat 3248.467 kb on - strandat 3248.467 kb on - strandat 3248.467 kb on - strandat 3248.472 kb on + strandat 3248.472 kb on + strandat 3248.472 kb on + strandat 3248.472 kb on + strandat 3248.472 kb on + strandat 3248.472 kb on + strandat 3248.473 kb on - strandat 3248.473 kb on - strandat 3248.473 kb on - strandat 3248.473 kb on - strandat 3248.473 kb on - strandat 3248.473 kb on - strandat 3248.481 kb on + strandat 3248.640 kb on + strandat 3248.640 kb on + strandat 3248.640 kb on + strandat 3248.641 kb on - strandat 3248.641 kb on - strandat 3248.835 kb on - strandat 3248.835 kb on - strandat 3248.835 kb on - strandat 3248.837 kb on + strandat 3248.837 kb on + strandat 3248.837 kb on + strandat 3248.838 kb on - strandat 3248.838 kb on - strandat 3248.838 kb on - strandat 3248.885 kb on + strandat 3248.912 kb on + strandat 3249.224 kb on + strand, within A4249_RS16115at 3249.252 kb on - strand, within A4249_RS16115at 3249.383 kb on + strand, within A4249_RS16115at 3249.384 kb on - strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.449 kb on + strand, within A4249_RS16115at 3249.450 kb on - strand, within A4249_RS16115at 3249.450 kb on - strand, within A4249_RS16115at 3249.450 kb on - strand, within A4249_RS16115at 3249.450 kb on - strand, within A4249_RS16115at 3249.450 kb on - strand, within A4249_RS16115at 3249.450 kb on - strand, within A4249_RS16115

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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3,246,119 + A4249_RS16105 0.79 +0.6
3,246,318 + A4249_RS16105 0.84 +1.1
3,246,319 - A4249_RS16105 0.84 +0.2
3,246,319 - A4249_RS16105 0.84 +0.3
3,246,339 + A4249_RS16105 0.84 +1.2
3,246,340 - A4249_RS16105 0.84 -0.9
3,246,340 - A4249_RS16105 0.84 -0.6
3,246,375 + A4249_RS16105 0.85 +1.2
3,246,376 - A4249_RS16105 0.85 +0.2
3,246,414 + A4249_RS16105 0.86 +0.0
3,246,414 + A4249_RS16105 0.86 -0.4
3,246,414 + A4249_RS16105 0.86 +0.4
3,246,415 - A4249_RS16105 0.86 -0.5
3,246,445 + A4249_RS16105 0.87 -0.9
3,246,445 + A4249_RS16105 0.87 +2.1
3,246,445 + A4249_RS16105 0.87 +2.0
3,246,445 + A4249_RS16105 0.87 -1.6
3,246,445 + A4249_RS16105 0.87 +1.1
3,246,445 + A4249_RS16105 0.87 -1.2
3,246,445 + A4249_RS16105 0.87 -0.4
3,246,445 + A4249_RS16105 0.87 -1.0
3,246,446 - A4249_RS16105 0.87 +0.7
3,246,446 - A4249_RS16105 0.87 -0.1
3,246,446 - A4249_RS16105 0.87 -0.5
3,246,446 - A4249_RS16105 0.87 +0.8
3,246,447 + A4249_RS16105 0.87 +0.7
3,246,447 + A4249_RS16105 0.87 +0.4
3,246,447 + A4249_RS16105 0.87 +1.1
3,246,447 + A4249_RS16105 0.87 +1.1
3,246,447 + A4249_RS16105 0.87 +0.2
3,246,447 + A4249_RS16105 0.87 +1.9
3,246,447 + A4249_RS16105 0.87 +0.8
3,246,447 + A4249_RS16105 0.87 -0.3
3,246,447 + A4249_RS16105 0.87 +1.4
3,246,447 + A4249_RS16105 0.87 +0.6
3,246,447 + A4249_RS16105 0.87 +0.2
3,246,447 + A4249_RS16105 0.87 -0.6
3,246,448 - A4249_RS16105 0.87 +0.5
3,246,448 - A4249_RS16105 0.87 +1.1
3,246,448 - A4249_RS16105 0.87 -0.8
3,246,504 + A4249_RS16105 0.88 -0.1
3,246,504 + A4249_RS16105 0.88 +0.1
3,246,504 + A4249_RS16105 0.88 -0.7
3,246,504 + A4249_RS16105 0.88 +0.5
3,246,504 + A4249_RS16105 0.88 -0.5
3,246,504 + A4249_RS16105 0.88 +0.2
3,246,504 + A4249_RS16105 0.88 -0.4
3,246,505 - A4249_RS16105 0.88 +0.7
3,246,505 - A4249_RS16105 0.88 +0.1
3,246,505 - A4249_RS16105 0.88 -1.0
3,246,505 - A4249_RS16105 0.88 -0.9
3,246,505 - A4249_RS16105 0.88 +0.5
3,246,505 - A4249_RS16105 0.88 +0.0
3,246,505 - A4249_RS16105 0.88 +0.1
3,246,505 - A4249_RS16105 0.88 -1.3
3,246,651 + +0.7
3,246,651 + +0.3
3,246,651 + -0.3
3,246,651 + +1.4
3,246,651 + -0.3
3,246,651 + -1.2
3,246,651 + +0.8
3,246,651 + +0.9
3,246,651 + +0.8
3,246,651 + -0.1
3,246,651 + -0.9
3,246,651 + -0.3
3,246,652 - +0.3
3,246,652 - +1.0
3,246,652 - -0.8
3,246,652 - -0.6
3,246,652 - +0.6
3,246,652 - +0.5
3,246,652 - -1.0
3,246,652 - -0.3
3,246,652 - +0.1
3,246,652 - +0.9
3,246,652 - -1.3
3,246,652 - +0.6
3,246,652 - +0.8
3,246,652 - +1.7
3,246,652 - +0.9
3,246,906 + -1.2
3,246,906 + -0.0
3,246,906 + +0.2
3,246,990 + -1.8
3,246,991 - +0.2
3,247,029 + +2.2
3,247,030 - +1.3
3,247,030 - -0.3
3,247,030 - -0.2
3,247,030 - -1.7
3,247,079 + -0.2
3,247,079 + +2.4
3,247,080 - +0.4
3,247,518 - A4249_RS16110 0.33 +0.3
3,247,518 - A4249_RS16110 0.33 -0.1
3,247,518 - A4249_RS16110 0.33 -0.9
3,247,676 + A4249_RS16110 0.44 +1.6
3,247,676 + A4249_RS16110 0.44 +0.2
3,247,676 + A4249_RS16110 0.44 +0.6
3,247,676 + A4249_RS16110 0.44 +1.0
3,247,677 - A4249_RS16110 0.44 -0.4
3,247,677 - A4249_RS16110 0.44 +0.9
3,247,677 - A4249_RS16110 0.44 +0.5
3,247,677 - A4249_RS16110 0.44 +1.0
3,247,677 - A4249_RS16110 0.44 -0.6
3,247,677 - A4249_RS16110 0.44 +1.1
3,247,739 + A4249_RS16110 0.49 +0.2
3,247,740 - A4249_RS16110 0.49 -0.1
3,247,749 + A4249_RS16110 0.49 -0.3
3,247,780 + A4249_RS16110 0.51 -0.2
3,247,780 + A4249_RS16110 0.51 +0.4
3,247,780 + A4249_RS16110 0.51 +0.0
3,247,780 + A4249_RS16110 0.51 +0.1
3,247,781 - A4249_RS16110 0.52 +0.2
3,247,781 - A4249_RS16110 0.52 -0.2
3,247,904 + A4249_RS16110 0.60 -0.8
3,247,904 + A4249_RS16110 0.60 +0.5
3,247,904 + A4249_RS16110 0.60 -1.1
3,247,905 - A4249_RS16110 0.60 +0.7
3,247,905 - A4249_RS16110 0.60 -0.3
3,247,905 - A4249_RS16110 0.60 +0.2
3,247,905 - A4249_RS16110 0.60 +0.4
3,247,940 + A4249_RS16110 0.63 -0.5
3,247,941 - A4249_RS16110 0.63 +0.2
3,247,941 - A4249_RS16110 0.63 +0.8
3,247,941 - A4249_RS16110 0.63 -0.8
3,247,941 - A4249_RS16110 0.63 -0.6
3,247,941 - A4249_RS16110 0.63 -0.1
3,247,955 + A4249_RS16110 0.64 -0.5
3,247,956 - A4249_RS16110 0.64 +0.7
3,248,466 + +0.3
3,248,467 - +0.5
3,248,467 - +0.3
3,248,467 - +0.8
3,248,472 + +1.5
3,248,472 + -1.6
3,248,472 + -0.0
3,248,472 + +0.6
3,248,472 + -0.2
3,248,472 + +0.7
3,248,473 - -0.4
3,248,473 - -0.2
3,248,473 - +0.3
3,248,473 - -0.2
3,248,473 - -0.1
3,248,473 - +0.2
3,248,481 + +1.1
3,248,640 + -0.3
3,248,640 + +0.2
3,248,640 + +0.7
3,248,641 - -0.4
3,248,641 - -0.1
3,248,835 - -0.2
3,248,835 - -0.2
3,248,835 - +0.4
3,248,837 + +0.4
3,248,837 + -0.0
3,248,837 + +0.2
3,248,838 - -0.5
3,248,838 - -0.7
3,248,838 - -0.9
3,248,885 + +0.6
3,248,912 + -0.9
3,249,224 + A4249_RS16115 0.22 -2.4
3,249,252 - A4249_RS16115 0.23 +0.7
3,249,383 + A4249_RS16115 0.28 +0.6
3,249,384 - A4249_RS16115 0.28 +0.6
3,249,449 + A4249_RS16115 0.31 +0.2
3,249,449 + A4249_RS16115 0.31 +0.2
3,249,449 + A4249_RS16115 0.31 -0.8
3,249,449 + A4249_RS16115 0.31 -0.9
3,249,449 + A4249_RS16115 0.31 -0.6
3,249,449 + A4249_RS16115 0.31 -0.1
3,249,449 + A4249_RS16115 0.31 +0.1
3,249,449 + A4249_RS16115 0.31 +0.1
3,249,449 + A4249_RS16115 0.31 -0.0
3,249,450 - A4249_RS16115 0.31 -0.2
3,249,450 - A4249_RS16115 0.31 +1.4
3,249,450 - A4249_RS16115 0.31 -1.3
3,249,450 - A4249_RS16115 0.31 -0.1
3,249,450 - A4249_RS16115 0.31 -0.3
3,249,450 - A4249_RS16115 0.31 -0.2

Or see this region's nucleotide sequence