Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16060 and A4249_RS16065 are separated by 2 nucleotides A4249_RS16065 and A4249_RS16070 are separated by 30 nucleotides A4249_RS16070 and A4249_RS16075 are separated by 290 nucleotides
A4249_RS16060: A4249_RS16060 - LPS export ABC transporter periplasmic protein LptC, at 3,235,109 to 3,235,768
_RS16060
A4249_RS16065: A4249_RS16065 - LptA/OstA family protein, at 3,235,771 to 3,236,259
_RS16065
A4249_RS16070: A4249_RS16070 - LPS export ABC transporter ATP-binding protein, at 3,236,290 to 3,237,081
_RS16070
A4249_RS16075: A4249_RS16075 - RNA polymerase factor sigma-54, at 3,237,372 to 3,238,871
_RS16075
Position (kb)
3236
3237
3238 Strain fitness (log2 ratio)
-1
0
1 at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.092 kb on + strand at 3237.093 kb on - strand at 3237.093 kb on - strand at 3237.093 kb on - strand at 3237.093 kb on - strand at 3237.093 kb on - strand at 3237.093 kb on - strand at 3237.093 kb on - strand at 3237.188 kb on + strand at 3237.189 kb on - strand at 3237.388 kb on + strand at 3237.389 kb on - strand at 3237.651 kb on + strand, within A4249_RS16075 at 3237.651 kb on + strand, within A4249_RS16075 at 3237.651 kb on + strand, within A4249_RS16075 at 3237.651 kb on + strand, within A4249_RS16075 at 3237.651 kb on + strand, within A4249_RS16075 at 3237.651 kb on + strand, within A4249_RS16075 at 3237.652 kb on - strand, within A4249_RS16075 at 3237.652 kb on - strand, within A4249_RS16075 at 3237.652 kb on - strand, within A4249_RS16075 at 3237.894 kb on + strand, within A4249_RS16075 at 3237.894 kb on + strand, within A4249_RS16075 at 3237.894 kb on + strand, within A4249_RS16075
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 3,237,092 + +1.5 3,237,092 + +0.6 3,237,092 + -0.7 3,237,092 + -0.5 3,237,092 + -0.1 3,237,092 + -0.3 3,237,092 + +1.4 3,237,092 + -0.2 3,237,092 + -0.8 3,237,093 - +0.8 3,237,093 - +0.5 3,237,093 - -0.6 3,237,093 - +0.3 3,237,093 - -0.6 3,237,093 - -0.1 3,237,093 - +0.2 3,237,188 + +0.4 3,237,189 - +1.0 3,237,388 + +0.0 3,237,389 - -0.8 3,237,651 + A4249_RS16075 0.19 -0.3 3,237,651 + A4249_RS16075 0.19 -0.5 3,237,651 + A4249_RS16075 0.19 +0.7 3,237,651 + A4249_RS16075 0.19 -0.4 3,237,651 + A4249_RS16075 0.19 +1.6 3,237,651 + A4249_RS16075 0.19 -0.5 3,237,652 - A4249_RS16075 0.19 -0.9 3,237,652 - A4249_RS16075 0.19 +1.4 3,237,652 - A4249_RS16075 0.19 +1.6 3,237,894 + A4249_RS16075 0.35 +0.6 3,237,894 + A4249_RS16075 0.35 +1.1 3,237,894 + A4249_RS16075 0.35 +0.5
Or see this region's nucleotide sequence