Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15970 and A4249_RS15975 are separated by 64 nucleotides A4249_RS15975 and A4249_RS15980 are separated by 42 nucleotides A4249_RS15980 and A4249_RS15985 overlap by 4 nucleotides A4249_RS15985 and A4249_RS15990 overlap by 4 nucleotides
A4249_RS15970: A4249_RS15970 - dihydropteroate synthase, at 3,221,934 to 3,222,734
_RS15970
A4249_RS15975: A4249_RS15975 - DMT family protein, at 3,222,799 to 3,223,155
_RS15975
A4249_RS15980: A4249_RS15980 - multidrug efflux SMR transporter, at 3,223,198 to 3,223,542
_RS15980
A4249_RS15985: A4249_RS15985 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 3,223,539 to 3,224,339
_RS15985
A4249_RS15990: A4249_RS15990 - nucleotidyltransferase family protein, at 3,224,336 to 3,224,911
_RS15990
Position (kb)
3223
3224 Strain fitness (log2 ratio)
-2
-1
0
1 at 3222.707 kb on + strand at 3222.707 kb on + strand at 3222.707 kb on + strand at 3222.707 kb on + strand at 3222.708 kb on - strand at 3222.708 kb on - strand at 3222.708 kb on - strand at 3222.708 kb on - strand at 3222.708 kb on - strand at 3222.764 kb on + strand at 3222.764 kb on + strand at 3222.764 kb on + strand at 3222.764 kb on + strand at 3222.765 kb on - strand at 3222.765 kb on - strand at 3222.765 kb on - strand at 3222.814 kb on + strand at 3222.814 kb on + strand at 3222.815 kb on - strand at 3222.871 kb on + strand, within A4249_RS15975 at 3222.872 kb on - strand, within A4249_RS15975 at 3222.872 kb on - strand, within A4249_RS15975 at 3222.988 kb on + strand, within A4249_RS15975 at 3222.988 kb on + strand, within A4249_RS15975 at 3223.060 kb on + strand, within A4249_RS15975 at 3223.060 kb on + strand, within A4249_RS15975 at 3223.061 kb on - strand, within A4249_RS15975 at 3223.061 kb on - strand, within A4249_RS15975 at 3223.061 kb on - strand, within A4249_RS15975 at 3223.061 kb on - strand, within A4249_RS15975 at 3223.061 kb on - strand, within A4249_RS15975 at 3223.061 kb on - strand, within A4249_RS15975 at 3223.390 kb on + strand, within A4249_RS15980 at 3223.390 kb on + strand, within A4249_RS15980 at 3223.390 kb on + strand, within A4249_RS15980 at 3223.390 kb on + strand, within A4249_RS15980 at 3223.391 kb on - strand, within A4249_RS15980 at 3223.391 kb on - strand, within A4249_RS15980 at 3223.391 kb on - strand, within A4249_RS15980 at 3223.391 kb on - strand, within A4249_RS15980 at 3223.391 kb on - strand, within A4249_RS15980 at 3223.448 kb on - strand, within A4249_RS15980 at 3224.456 kb on + strand, within A4249_RS15990 at 3224.457 kb on - strand, within A4249_RS15990 at 3224.457 kb on - strand, within A4249_RS15990 at 3224.457 kb on - strand, within A4249_RS15990 at 3224.514 kb on - strand, within A4249_RS15990 at 3224.514 kb on - strand, within A4249_RS15990 at 3224.514 kb on - strand, within A4249_RS15990 at 3224.525 kb on + strand, within A4249_RS15990 at 3224.526 kb on - strand, within A4249_RS15990
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 3,222,707 + -0.7 3,222,707 + +0.8 3,222,707 + +0.1 3,222,707 + -0.0 3,222,708 - +1.4 3,222,708 - +0.4 3,222,708 - -1.3 3,222,708 - +0.8 3,222,708 - +0.5 3,222,764 + -1.3 3,222,764 + -0.2 3,222,764 + -0.2 3,222,764 + +1.0 3,222,765 - -2.2 3,222,765 - +0.4 3,222,765 - +0.5 3,222,814 + +0.5 3,222,814 + -0.9 3,222,815 - -0.8 3,222,871 + A4249_RS15975 0.20 +0.3 3,222,872 - A4249_RS15975 0.20 -0.3 3,222,872 - A4249_RS15975 0.20 -2.1 3,222,988 + A4249_RS15975 0.53 +0.1 3,222,988 + A4249_RS15975 0.53 -0.3 3,223,060 + A4249_RS15975 0.73 +0.5 3,223,060 + A4249_RS15975 0.73 -0.5 3,223,061 - A4249_RS15975 0.73 -1.7 3,223,061 - A4249_RS15975 0.73 -0.2 3,223,061 - A4249_RS15975 0.73 -0.0 3,223,061 - A4249_RS15975 0.73 -0.3 3,223,061 - A4249_RS15975 0.73 +0.2 3,223,061 - A4249_RS15975 0.73 -0.1 3,223,390 + A4249_RS15980 0.56 +0.8 3,223,390 + A4249_RS15980 0.56 -0.9 3,223,390 + A4249_RS15980 0.56 +0.4 3,223,390 + A4249_RS15980 0.56 -0.2 3,223,391 - A4249_RS15980 0.56 -1.3 3,223,391 - A4249_RS15980 0.56 -2.4 3,223,391 - A4249_RS15980 0.56 -0.1 3,223,391 - A4249_RS15980 0.56 +1.2 3,223,391 - A4249_RS15980 0.56 +0.2 3,223,448 - A4249_RS15980 0.72 -0.3 3,224,456 + A4249_RS15990 0.21 -0.3 3,224,457 - A4249_RS15990 0.21 +0.3 3,224,457 - A4249_RS15990 0.21 -0.2 3,224,457 - A4249_RS15990 0.21 -1.2 3,224,514 - A4249_RS15990 0.31 -0.4 3,224,514 - A4249_RS15990 0.31 -1.0 3,224,514 - A4249_RS15990 0.31 +0.2 3,224,525 + A4249_RS15990 0.33 +0.1 3,224,526 - A4249_RS15990 0.33 +0.2
Or see this region's nucleotide sequence