Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15480

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15475 and A4249_RS15480 are separated by 57 nucleotidesA4249_RS15480 and A4249_RS15485 overlap by 4 nucleotidesA4249_RS15485 and A4249_RS15490 are separated by 132 nucleotides A4249_RS15475: A4249_RS15475 - DMT family transporter, at 3,132,855 to 3,133,784 _RS15475 A4249_RS15480: A4249_RS15480 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 3,133,842 to 3,136,016 _RS15480 A4249_RS15485: A4249_RS15485 - biliverdin-producing heme oxygenase, at 3,136,013 to 3,136,600 _RS15485 A4249_RS15490: A4249_RS15490 - transglutaminase family protein, at 3,136,733 to 3,137,509 _RS15490 Position (kb) 3133 3134 3135 3136 3137Strain fitness (log2 ratio) -2 -1 0 1 2at 3132.856 kb on + strandat 3132.856 kb on + strandat 3132.856 kb on + strandat 3132.857 kb on - strandat 3132.857 kb on - strandat 3132.933 kb on + strandat 3132.948 kb on + strand, within A4249_RS15475at 3132.948 kb on + strand, within A4249_RS15475at 3132.948 kb on + strand, within A4249_RS15475at 3132.948 kb on + strand, within A4249_RS15475at 3132.948 kb on + strand, within A4249_RS15475at 3132.949 kb on - strand, within A4249_RS15475at 3132.949 kb on - strand, within A4249_RS15475at 3132.949 kb on - strand, within A4249_RS15475at 3132.949 kb on - strand, within A4249_RS15475at 3133.269 kb on + strand, within A4249_RS15475at 3133.283 kb on - strand, within A4249_RS15475at 3133.291 kb on + strand, within A4249_RS15475at 3133.291 kb on + strand, within A4249_RS15475at 3133.292 kb on - strand, within A4249_RS15475at 3133.292 kb on - strand, within A4249_RS15475at 3133.292 kb on - strand, within A4249_RS15475at 3133.522 kb on + strand, within A4249_RS15475at 3133.522 kb on + strand, within A4249_RS15475at 3133.522 kb on + strand, within A4249_RS15475at 3133.522 kb on + strand, within A4249_RS15475at 3133.523 kb on - strand, within A4249_RS15475at 3133.796 kb on + strandat 3133.796 kb on + strandat 3134.066 kb on - strand, within A4249_RS15480at 3134.066 kb on - strand, within A4249_RS15480at 3134.071 kb on + strand, within A4249_RS15480at 3134.071 kb on + strand, within A4249_RS15480at 3134.071 kb on + strand, within A4249_RS15480at 3134.071 kb on + strand, within A4249_RS15480at 3134.071 kb on + strand, within A4249_RS15480at 3134.072 kb on - strand, within A4249_RS15480at 3134.072 kb on - strand, within A4249_RS15480at 3134.072 kb on - strand, within A4249_RS15480at 3134.072 kb on - strand, within A4249_RS15480at 3134.072 kb on - strand, within A4249_RS15480at 3134.224 kb on + strand, within A4249_RS15480at 3134.224 kb on + strand, within A4249_RS15480at 3134.224 kb on + strand, within A4249_RS15480at 3134.225 kb on - strand, within A4249_RS15480at 3134.225 kb on - strand, within A4249_RS15480at 3134.225 kb on - strand, within A4249_RS15480at 3134.263 kb on + strand, within A4249_RS15480at 3134.263 kb on + strand, within A4249_RS15480at 3134.264 kb on - strand, within A4249_RS15480at 3134.425 kb on + strand, within A4249_RS15480at 3134.425 kb on + strand, within A4249_RS15480at 3134.425 kb on + strand, within A4249_RS15480at 3134.425 kb on + strand, within A4249_RS15480at 3134.425 kb on + strand, within A4249_RS15480at 3134.425 kb on + strand, within A4249_RS15480at 3134.425 kb on + strand, within A4249_RS15480at 3134.426 kb on - strand, within A4249_RS15480at 3134.865 kb on + strand, within A4249_RS15480at 3134.866 kb on - strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.885 kb on + strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3134.886 kb on - strand, within A4249_RS15480at 3135.056 kb on - strand, within A4249_RS15480at 3135.098 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.133 kb on + strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.134 kb on - strand, within A4249_RS15480at 3135.146 kb on + strand, within A4249_RS15480at 3135.146 kb on + strand, within A4249_RS15480at 3135.146 kb on + strand, within A4249_RS15480at 3135.147 kb on - strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.241 kb on + strand, within A4249_RS15480at 3135.242 kb on - strand, within A4249_RS15480at 3135.242 kb on - strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.335 kb on + strand, within A4249_RS15480at 3135.336 kb on - strand, within A4249_RS15480at 3135.336 kb on - strand, within A4249_RS15480at 3135.336 kb on - strand, within A4249_RS15480at 3135.376 kb on + strand, within A4249_RS15480at 3135.376 kb on + strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.377 kb on - strand, within A4249_RS15480at 3135.496 kb on + strand, within A4249_RS15480at 3135.496 kb on + strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.497 kb on - strand, within A4249_RS15480at 3135.725 kb on - strand, within A4249_RS15480at 3136.176 kb on + strand, within A4249_RS15485at 3136.177 kb on - strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.272 kb on + strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.273 kb on - strand, within A4249_RS15485at 3136.347 kb on - strand, within A4249_RS15485at 3136.467 kb on + strand, within A4249_RS15485at 3136.612 kb on + strandat 3136.612 kb on + strandat 3136.764 kb on - strandat 3136.764 kb on - strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.793 kb on + strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.794 kb on - strandat 3136.943 kb on + strand, within A4249_RS15490at 3136.943 kb on + strand, within A4249_RS15490at 3136.943 kb on + strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490at 3136.944 kb on - strand, within A4249_RS15490

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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3,132,856 + -1.0
3,132,856 + -0.9
3,132,856 + -0.7
3,132,857 - -0.8
3,132,857 - -0.4
3,132,933 + +0.2
3,132,948 + A4249_RS15475 0.10 +0.2
3,132,948 + A4249_RS15475 0.10 +0.5
3,132,948 + A4249_RS15475 0.10 +0.4
3,132,948 + A4249_RS15475 0.10 +0.4
3,132,948 + A4249_RS15475 0.10 -1.4
3,132,949 - A4249_RS15475 0.10 -0.0
3,132,949 - A4249_RS15475 0.10 -0.4
3,132,949 - A4249_RS15475 0.10 -1.3
3,132,949 - A4249_RS15475 0.10 +0.2
3,133,269 + A4249_RS15475 0.45 -0.1
3,133,283 - A4249_RS15475 0.46 -0.3
3,133,291 + A4249_RS15475 0.47 -0.3
3,133,291 + A4249_RS15475 0.47 -0.5
3,133,292 - A4249_RS15475 0.47 -0.3
3,133,292 - A4249_RS15475 0.47 +0.3
3,133,292 - A4249_RS15475 0.47 -0.2
3,133,522 + A4249_RS15475 0.72 +0.4
3,133,522 + A4249_RS15475 0.72 -2.1
3,133,522 + A4249_RS15475 0.72 +0.4
3,133,522 + A4249_RS15475 0.72 +1.1
3,133,523 - A4249_RS15475 0.72 +0.1
3,133,796 + +0.8
3,133,796 + -1.9
3,134,066 - A4249_RS15480 0.10 -0.0
3,134,066 - A4249_RS15480 0.10 +0.4
3,134,071 + A4249_RS15480 0.11 -0.6
3,134,071 + A4249_RS15480 0.11 -0.3
3,134,071 + A4249_RS15480 0.11 +0.2
3,134,071 + A4249_RS15480 0.11 -0.2
3,134,071 + A4249_RS15480 0.11 +0.2
3,134,072 - A4249_RS15480 0.11 -0.1
3,134,072 - A4249_RS15480 0.11 -0.0
3,134,072 - A4249_RS15480 0.11 +1.6
3,134,072 - A4249_RS15480 0.11 +0.2
3,134,072 - A4249_RS15480 0.11 +0.4
3,134,224 + A4249_RS15480 0.18 -0.2
3,134,224 + A4249_RS15480 0.18 -0.5
3,134,224 + A4249_RS15480 0.18 +0.4
3,134,225 - A4249_RS15480 0.18 +0.2
3,134,225 - A4249_RS15480 0.18 -0.3
3,134,225 - A4249_RS15480 0.18 +0.0
3,134,263 + A4249_RS15480 0.19 +0.3
3,134,263 + A4249_RS15480 0.19 +0.4
3,134,264 - A4249_RS15480 0.19 -1.3
3,134,425 + A4249_RS15480 0.27 +0.4
3,134,425 + A4249_RS15480 0.27 +0.7
3,134,425 + A4249_RS15480 0.27 +0.3
3,134,425 + A4249_RS15480 0.27 +0.0
3,134,425 + A4249_RS15480 0.27 -0.6
3,134,425 + A4249_RS15480 0.27 +1.8
3,134,425 + A4249_RS15480 0.27 +0.7
3,134,426 - A4249_RS15480 0.27 -0.1
3,134,865 + A4249_RS15480 0.47 -0.4
3,134,866 - A4249_RS15480 0.47 +1.5
3,134,885 + A4249_RS15480 0.48 +0.9
3,134,885 + A4249_RS15480 0.48 -0.1
3,134,885 + A4249_RS15480 0.48 -0.3
3,134,885 + A4249_RS15480 0.48 +0.2
3,134,885 + A4249_RS15480 0.48 -0.5
3,134,885 + A4249_RS15480 0.48 +0.7
3,134,885 + A4249_RS15480 0.48 -0.7
3,134,885 + A4249_RS15480 0.48 +0.8
3,134,885 + A4249_RS15480 0.48 -1.3
3,134,885 + A4249_RS15480 0.48 +0.8
3,134,886 - A4249_RS15480 0.48 -1.4
3,134,886 - A4249_RS15480 0.48 -1.4
3,134,886 - A4249_RS15480 0.48 -0.3
3,134,886 - A4249_RS15480 0.48 -0.5
3,134,886 - A4249_RS15480 0.48 +1.5
3,134,886 - A4249_RS15480 0.48 -0.5
3,134,886 - A4249_RS15480 0.48 +1.6
3,134,886 - A4249_RS15480 0.48 -0.1
3,134,886 - A4249_RS15480 0.48 -2.3
3,134,886 - A4249_RS15480 0.48 -0.7
3,135,056 - A4249_RS15480 0.56 -0.5
3,135,098 + A4249_RS15480 0.58 +0.8
3,135,133 + A4249_RS15480 0.59 +0.8
3,135,133 + A4249_RS15480 0.59 +0.3
3,135,133 + A4249_RS15480 0.59 +0.2
3,135,133 + A4249_RS15480 0.59 -0.6
3,135,134 - A4249_RS15480 0.59 +1.0
3,135,134 - A4249_RS15480 0.59 -1.2
3,135,134 - A4249_RS15480 0.59 +0.6
3,135,134 - A4249_RS15480 0.59 +1.8
3,135,146 + A4249_RS15480 0.60 -0.6
3,135,146 + A4249_RS15480 0.60 +1.6
3,135,146 + A4249_RS15480 0.60 -0.7
3,135,147 - A4249_RS15480 0.60 +0.9
3,135,241 + A4249_RS15480 0.64 +0.0
3,135,241 + A4249_RS15480 0.64 -0.3
3,135,241 + A4249_RS15480 0.64 -1.3
3,135,241 + A4249_RS15480 0.64 +0.8
3,135,242 - A4249_RS15480 0.64 -0.6
3,135,242 - A4249_RS15480 0.64 +0.1
3,135,335 + A4249_RS15480 0.69 +0.0
3,135,335 + A4249_RS15480 0.69 +1.1
3,135,335 + A4249_RS15480 0.69 +0.5
3,135,335 + A4249_RS15480 0.69 +0.4
3,135,335 + A4249_RS15480 0.69 -0.8
3,135,335 + A4249_RS15480 0.69 -1.1
3,135,336 - A4249_RS15480 0.69 -0.9
3,135,336 - A4249_RS15480 0.69 +2.1
3,135,336 - A4249_RS15480 0.69 -0.5
3,135,376 + A4249_RS15480 0.71 +0.6
3,135,376 + A4249_RS15480 0.71 -1.0
3,135,377 - A4249_RS15480 0.71 +0.8
3,135,377 - A4249_RS15480 0.71 +0.2
3,135,377 - A4249_RS15480 0.71 +0.3
3,135,377 - A4249_RS15480 0.71 -0.9
3,135,496 + A4249_RS15480 0.76 +0.1
3,135,496 + A4249_RS15480 0.76 -1.0
3,135,497 - A4249_RS15480 0.76 -0.3
3,135,497 - A4249_RS15480 0.76 +1.1
3,135,497 - A4249_RS15480 0.76 +2.1
3,135,497 - A4249_RS15480 0.76 +0.1
3,135,725 - A4249_RS15480 0.87 -0.9
3,136,176 + A4249_RS15485 0.28 +0.0
3,136,177 - A4249_RS15485 0.28 +0.6
3,136,272 + A4249_RS15485 0.44 +1.2
3,136,272 + A4249_RS15485 0.44 -0.2
3,136,272 + A4249_RS15485 0.44 -0.1
3,136,272 + A4249_RS15485 0.44 -0.5
3,136,272 + A4249_RS15485 0.44 +0.8
3,136,272 + A4249_RS15485 0.44 +0.8
3,136,272 + A4249_RS15485 0.44 -2.0
3,136,272 + A4249_RS15485 0.44 +1.1
3,136,273 - A4249_RS15485 0.44 +1.0
3,136,273 - A4249_RS15485 0.44 +0.0
3,136,273 - A4249_RS15485 0.44 -0.7
3,136,273 - A4249_RS15485 0.44 -0.1
3,136,273 - A4249_RS15485 0.44 +0.4
3,136,273 - A4249_RS15485 0.44 +1.0
3,136,347 - A4249_RS15485 0.57 +2.2
3,136,467 + A4249_RS15485 0.77 -0.2
3,136,612 + -0.2
3,136,612 + +0.0
3,136,764 - -1.5
3,136,764 - -0.4
3,136,793 + -0.8
3,136,793 + +1.2
3,136,793 + +0.1
3,136,793 + -0.3
3,136,793 + -0.9
3,136,793 + -0.2
3,136,794 - +0.4
3,136,794 - -0.3
3,136,794 - +0.0
3,136,794 - -1.0
3,136,794 - -0.8
3,136,794 - -0.2
3,136,794 - -0.5
3,136,794 - +0.1
3,136,794 - -1.1
3,136,794 - -1.9
3,136,943 + A4249_RS15490 0.27 -0.2
3,136,943 + A4249_RS15490 0.27 -0.1
3,136,943 + A4249_RS15490 0.27 -0.6
3,136,944 - A4249_RS15490 0.27 -1.2
3,136,944 - A4249_RS15490 0.27 +0.6
3,136,944 - A4249_RS15490 0.27 +0.1
3,136,944 - A4249_RS15490 0.27 +0.4
3,136,944 - A4249_RS15490 0.27 -0.6
3,136,944 - A4249_RS15490 0.27 -0.8

Or see this region's nucleotide sequence