Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14960 and A4249_RS14965 are separated by 98 nucleotides A4249_RS14965 and A4249_RS14970 overlap by 4 nucleotides A4249_RS14970 and A4249_RS14975 are separated by 68 nucleotides A4249_RS14975 and A4249_RS14980 are separated by 47 nucleotides
A4249_RS14960: A4249_RS14960 - septation protein IspZ, at 3,027,632 to 3,028,252
_RS14960
A4249_RS14965: A4249_RS14965 - MarR family transcriptional regulator, at 3,028,351 to 3,028,965
_RS14965
A4249_RS14970: A4249_RS14970 - phasin, at 3,028,962 to 3,029,360
_RS14970
A4249_RS14975: A4249_RS14975 - creatininase family protein, at 3,029,429 to 3,030,202
_RS14975
A4249_RS14980: A4249_RS14980 - TetR/AcrR family transcriptional regulator, at 3,030,250 to 3,030,867
_RS14980
Position (kb)
3028
3029
3030 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3027.995 kb on + strand, within A4249_RS14960 at 3027.995 kb on + strand, within A4249_RS14960 at 3027.995 kb on + strand, within A4249_RS14960 at 3027.996 kb on - strand, within A4249_RS14960 at 3027.996 kb on - strand, within A4249_RS14960 at 3027.996 kb on - strand, within A4249_RS14960 at 3028.064 kb on + strand, within A4249_RS14960 at 3028.064 kb on + strand, within A4249_RS14960 at 3028.064 kb on + strand, within A4249_RS14960 at 3028.065 kb on - strand, within A4249_RS14960 at 3028.065 kb on - strand, within A4249_RS14960 at 3028.083 kb on + strand, within A4249_RS14960 at 3028.083 kb on + strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.250 kb on + strand at 3028.251 kb on - strand at 3028.251 kb on - strand at 3028.251 kb on - strand at 3028.303 kb on - strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.840 kb on - strand, within A4249_RS14965 at 3028.964 kb on - strand at 3028.964 kb on - strand at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.629 kb on - strand, within A4249_RS14975 at 3029.629 kb on - strand, within A4249_RS14975 at 3029.629 kb on - strand, within A4249_RS14975 at 3029.874 kb on + strand, within A4249_RS14975 at 3029.874 kb on + strand, within A4249_RS14975 at 3029.874 kb on + strand, within A4249_RS14975 at 3029.875 kb on - strand, within A4249_RS14975 at 3029.998 kb on + strand, within A4249_RS14975 at 3029.999 kb on - strand, within A4249_RS14975 at 3029.999 kb on - strand, within A4249_RS14975 at 3030.116 kb on + strand, within A4249_RS14975 at 3030.116 kb on + strand, within A4249_RS14975 at 3030.117 kb on - strand, within A4249_RS14975 at 3030.117 kb on - strand, within A4249_RS14975 at 3030.237 kb on + strand at 3030.238 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 3,027,995 + A4249_RS14960 0.58 -0.6 3,027,995 + A4249_RS14960 0.58 +0.5 3,027,995 + A4249_RS14960 0.58 +0.3 3,027,996 - A4249_RS14960 0.59 -1.4 3,027,996 - A4249_RS14960 0.59 -0.5 3,027,996 - A4249_RS14960 0.59 +0.6 3,028,064 + A4249_RS14960 0.70 +1.1 3,028,064 + A4249_RS14960 0.70 -0.1 3,028,064 + A4249_RS14960 0.70 -0.5 3,028,065 - A4249_RS14960 0.70 -0.1 3,028,065 - A4249_RS14960 0.70 +0.9 3,028,083 + A4249_RS14960 0.73 -1.1 3,028,083 + A4249_RS14960 0.73 +0.1 3,028,084 - A4249_RS14960 0.73 +0.8 3,028,084 - A4249_RS14960 0.73 -0.9 3,028,084 - A4249_RS14960 0.73 -1.6 3,028,084 - A4249_RS14960 0.73 +0.4 3,028,250 + -0.6 3,028,251 - -0.4 3,028,251 - -1.0 3,028,251 - -0.2 3,028,303 - +0.0 3,028,316 + +0.1 3,028,316 + -0.7 3,028,316 + +1.0 3,028,316 + +1.4 3,028,316 + -1.0 3,028,316 + -1.4 3,028,317 - +0.1 3,028,317 - +1.7 3,028,317 - -0.0 3,028,317 - +0.3 3,028,317 - +0.6 3,028,447 + A4249_RS14965 0.16 -0.9 3,028,447 + A4249_RS14965 0.16 -0.5 3,028,447 + A4249_RS14965 0.16 +0.1 3,028,447 + A4249_RS14965 0.16 -0.2 3,028,447 + A4249_RS14965 0.16 +0.2 3,028,447 + A4249_RS14965 0.16 -0.9 3,028,447 + A4249_RS14965 0.16 -1.8 3,028,447 + A4249_RS14965 0.16 -0.3 3,028,448 - A4249_RS14965 0.16 +0.2 3,028,448 - A4249_RS14965 0.16 +1.2 3,028,448 - A4249_RS14965 0.16 -0.5 3,028,448 - A4249_RS14965 0.16 -0.4 3,028,448 - A4249_RS14965 0.16 +0.7 3,028,448 - A4249_RS14965 0.16 -0.2 3,028,448 - A4249_RS14965 0.16 -1.1 3,028,448 - A4249_RS14965 0.16 +0.2 3,028,840 - A4249_RS14965 0.80 -1.0 3,028,964 - -1.0 3,028,964 - -0.2 3,029,101 + A4249_RS14970 0.35 +0.6 3,029,101 + A4249_RS14970 0.35 -0.2 3,029,101 + A4249_RS14970 0.35 +0.0 3,029,101 + A4249_RS14970 0.35 +0.4 3,029,101 + A4249_RS14970 0.35 -0.3 3,029,101 + A4249_RS14970 0.35 +1.8 3,029,101 + A4249_RS14970 0.35 -0.3 3,029,102 - A4249_RS14970 0.35 +1.5 3,029,102 - A4249_RS14970 0.35 +0.5 3,029,102 - A4249_RS14970 0.35 +1.4 3,029,102 - A4249_RS14970 0.35 -0.1 3,029,102 - A4249_RS14970 0.35 -0.9 3,029,102 - A4249_RS14970 0.35 -0.8 3,029,102 - A4249_RS14970 0.35 +0.0 3,029,629 - A4249_RS14975 0.26 +0.6 3,029,629 - A4249_RS14975 0.26 +0.5 3,029,629 - A4249_RS14975 0.26 -0.5 3,029,874 + A4249_RS14975 0.57 +1.6 3,029,874 + A4249_RS14975 0.57 -1.0 3,029,874 + A4249_RS14975 0.57 -0.4 3,029,875 - A4249_RS14975 0.58 +0.6 3,029,998 + A4249_RS14975 0.74 -1.0 3,029,999 - A4249_RS14975 0.74 +1.8 3,029,999 - A4249_RS14975 0.74 +1.2 3,030,116 + A4249_RS14975 0.89 +0.3 3,030,116 + A4249_RS14975 0.89 -2.3 3,030,117 - A4249_RS14975 0.89 +0.5 3,030,117 - A4249_RS14975 0.89 +0.1 3,030,237 + -0.1 3,030,238 - -0.0
Or see this region's nucleotide sequence