Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13610

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13600 and A4249_RS13605 overlap by 1 nucleotidesA4249_RS13605 and A4249_RS13610 overlap by 4 nucleotidesA4249_RS13610 and A4249_RS13615 overlap by 23 nucleotidesA4249_RS13615 and A4249_RS13620 are separated by 57 nucleotides A4249_RS13600: A4249_RS13600 - tryptophan--tRNA ligase, at 2,749,902 to 2,750,945 _RS13600 A4249_RS13605: A4249_RS13605 - OsmC family protein, at 2,750,945 to 2,751,409 _RS13605 A4249_RS13610: A4249_RS13610 - NAD(P)/FAD-dependent oxidoreductase, at 2,751,406 to 2,752,347 _RS13610 A4249_RS13615: A4249_RS13615 - Rrf2 family transcriptional regulator, at 2,752,325 to 2,752,804 _RS13615 A4249_RS13620: A4249_RS13620 - dienelactone hydrolase family protein, at 2,752,862 to 2,753,611 _RS13620 Position (kb) 2751 2752 2753Strain fitness (log2 ratio) -2 -1 0 1 2at 2750.943 kb on + strandat 2750.943 kb on + strandat 2750.943 kb on + strandat 2750.944 kb on - strandat 2750.944 kb on - strandat 2750.944 kb on - strandat 2750.944 kb on - strandat 2750.954 kb on + strandat 2750.954 kb on + strandat 2750.954 kb on + strandat 2750.955 kb on - strandat 2750.955 kb on - strandat 2750.955 kb on - strandat 2751.009 kb on - strand, within A4249_RS13605at 2751.009 kb on - strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.151 kb on + strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.152 kb on - strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.203 kb on + strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.204 kb on - strand, within A4249_RS13605at 2751.254 kb on + strand, within A4249_RS13605at 2751.254 kb on + strand, within A4249_RS13605at 2751.468 kb on + strandat 2751.468 kb on + strandat 2751.468 kb on + strandat 2751.468 kb on + strandat 2751.468 kb on + strandat 2751.468 kb on + strandat 2751.468 kb on + strandat 2751.469 kb on - strandat 2751.469 kb on - strandat 2751.469 kb on - strandat 2751.469 kb on - strandat 2751.469 kb on - strandat 2751.571 kb on + strand, within A4249_RS13610at 2751.571 kb on + strand, within A4249_RS13610at 2751.571 kb on + strand, within A4249_RS13610at 2751.572 kb on - strand, within A4249_RS13610at 2751.657 kb on + strand, within A4249_RS13610at 2751.854 kb on + strand, within A4249_RS13610at 2751.911 kb on + strand, within A4249_RS13610at 2752.116 kb on - strand, within A4249_RS13610at 2752.286 kb on + strandat 2752.286 kb on + strandat 2752.286 kb on + strandat 2752.286 kb on + strandat 2752.287 kb on - strandat 2752.287 kb on - strandat 2752.287 kb on - strandat 2752.415 kb on + strand, within A4249_RS13615at 2752.416 kb on - strand, within A4249_RS13615at 2752.416 kb on - strand, within A4249_RS13615at 2752.416 kb on - strand, within A4249_RS13615at 2752.416 kb on - strand, within A4249_RS13615at 2752.458 kb on + strand, within A4249_RS13615at 2752.458 kb on + strand, within A4249_RS13615at 2752.459 kb on - strand, within A4249_RS13615at 2752.459 kb on - strand, within A4249_RS13615at 2753.047 kb on + strand, within A4249_RS13620at 2753.143 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.145 kb on + strand, within A4249_RS13620at 2753.146 kb on - strand, within A4249_RS13620at 2753.146 kb on - strand, within A4249_RS13620at 2753.146 kb on - strand, within A4249_RS13620at 2753.146 kb on - strand, within A4249_RS13620at 2753.146 kb on - strand, within A4249_RS13620at 2753.146 kb on - strand, within A4249_RS13620at 2753.146 kb on - strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.151 kb on + strand, within A4249_RS13620at 2753.152 kb on - strand, within A4249_RS13620at 2753.152 kb on - strand, within A4249_RS13620at 2753.152 kb on - strand, within A4249_RS13620at 2753.152 kb on - strand, within A4249_RS13620

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,750,943 + -0.3
2,750,943 + -0.4
2,750,943 + -0.4
2,750,944 - +0.3
2,750,944 - +0.6
2,750,944 - +0.1
2,750,944 - -0.0
2,750,954 + -0.8
2,750,954 + -0.1
2,750,954 + -0.2
2,750,955 - +0.4
2,750,955 - +1.0
2,750,955 - -0.1
2,751,009 - A4249_RS13605 0.14 -0.8
2,751,009 - A4249_RS13605 0.14 +0.1
2,751,151 + A4249_RS13605 0.44 -0.5
2,751,151 + A4249_RS13605 0.44 -0.1
2,751,151 + A4249_RS13605 0.44 +0.3
2,751,151 + A4249_RS13605 0.44 +0.2
2,751,151 + A4249_RS13605 0.44 +0.2
2,751,151 + A4249_RS13605 0.44 -0.5
2,751,151 + A4249_RS13605 0.44 -0.6
2,751,151 + A4249_RS13605 0.44 +0.7
2,751,151 + A4249_RS13605 0.44 -0.4
2,751,151 + A4249_RS13605 0.44 +0.3
2,751,151 + A4249_RS13605 0.44 -0.3
2,751,151 + A4249_RS13605 0.44 -0.6
2,751,151 + A4249_RS13605 0.44 -0.3
2,751,151 + A4249_RS13605 0.44 -0.2
2,751,151 + A4249_RS13605 0.44 -0.1
2,751,151 + A4249_RS13605 0.44 +0.7
2,751,151 + A4249_RS13605 0.44 -0.1
2,751,151 + A4249_RS13605 0.44 -1.0
2,751,151 + A4249_RS13605 0.44 +2.1
2,751,151 + A4249_RS13605 0.44 +0.2
2,751,151 + A4249_RS13605 0.44 -0.2
2,751,152 - A4249_RS13605 0.45 -0.0
2,751,152 - A4249_RS13605 0.45 +0.6
2,751,152 - A4249_RS13605 0.45 -0.3
2,751,152 - A4249_RS13605 0.45 -0.0
2,751,152 - A4249_RS13605 0.45 -0.1
2,751,152 - A4249_RS13605 0.45 -1.0
2,751,152 - A4249_RS13605 0.45 +0.8
2,751,152 - A4249_RS13605 0.45 -0.4
2,751,152 - A4249_RS13605 0.45 -1.2
2,751,152 - A4249_RS13605 0.45 +1.1
2,751,152 - A4249_RS13605 0.45 +0.1
2,751,203 + A4249_RS13605 0.55 -0.3
2,751,203 + A4249_RS13605 0.55 -0.5
2,751,203 + A4249_RS13605 0.55 -0.7
2,751,203 + A4249_RS13605 0.55 -1.7
2,751,203 + A4249_RS13605 0.55 +0.1
2,751,203 + A4249_RS13605 0.55 +0.2
2,751,203 + A4249_RS13605 0.55 -0.4
2,751,203 + A4249_RS13605 0.55 -0.7
2,751,203 + A4249_RS13605 0.55 -0.4
2,751,203 + A4249_RS13605 0.55 -0.4
2,751,203 + A4249_RS13605 0.55 -0.1
2,751,203 + A4249_RS13605 0.55 +0.1
2,751,203 + A4249_RS13605 0.55 -1.2
2,751,203 + A4249_RS13605 0.55 +0.1
2,751,203 + A4249_RS13605 0.55 -0.0
2,751,204 - A4249_RS13605 0.56 -0.4
2,751,204 - A4249_RS13605 0.56 -0.9
2,751,204 - A4249_RS13605 0.56 +0.1
2,751,204 - A4249_RS13605 0.56 +0.9
2,751,204 - A4249_RS13605 0.56 -0.4
2,751,204 - A4249_RS13605 0.56 -0.1
2,751,204 - A4249_RS13605 0.56 -0.3
2,751,204 - A4249_RS13605 0.56 +0.8
2,751,204 - A4249_RS13605 0.56 -0.0
2,751,204 - A4249_RS13605 0.56 -0.8
2,751,254 + A4249_RS13605 0.66 +1.3
2,751,254 + A4249_RS13605 0.66 -0.1
2,751,468 + -0.2
2,751,468 + -0.1
2,751,468 + -0.3
2,751,468 + -0.2
2,751,468 + +0.9
2,751,468 + -0.4
2,751,468 + -0.5
2,751,469 - -0.2
2,751,469 - +0.3
2,751,469 - -0.4
2,751,469 - -0.3
2,751,469 - -1.1
2,751,571 + A4249_RS13610 0.18 -0.8
2,751,571 + A4249_RS13610 0.18 -0.3
2,751,571 + A4249_RS13610 0.18 -1.6
2,751,572 - A4249_RS13610 0.18 -0.0
2,751,657 + A4249_RS13610 0.27 -0.2
2,751,854 + A4249_RS13610 0.48 -1.2
2,751,911 + A4249_RS13610 0.54 +0.4
2,752,116 - A4249_RS13610 0.75 -0.0
2,752,286 + -0.4
2,752,286 + -1.0
2,752,286 + -0.5
2,752,286 + -0.4
2,752,287 - -0.2
2,752,287 - +1.1
2,752,287 - +0.2
2,752,415 + A4249_RS13615 0.19 +1.6
2,752,416 - A4249_RS13615 0.19 +1.4
2,752,416 - A4249_RS13615 0.19 +1.3
2,752,416 - A4249_RS13615 0.19 +0.7
2,752,416 - A4249_RS13615 0.19 +0.2
2,752,458 + A4249_RS13615 0.28 +1.4
2,752,458 + A4249_RS13615 0.28 +1.8
2,752,459 - A4249_RS13615 0.28 +1.2
2,752,459 - A4249_RS13615 0.28 -0.4
2,753,047 + A4249_RS13620 0.25 -0.9
2,753,143 + A4249_RS13620 0.37 -0.7
2,753,145 + A4249_RS13620 0.38 +0.1
2,753,145 + A4249_RS13620 0.38 +2.0
2,753,145 + A4249_RS13620 0.38 -0.9
2,753,145 + A4249_RS13620 0.38 +0.3
2,753,145 + A4249_RS13620 0.38 -0.9
2,753,145 + A4249_RS13620 0.38 -0.5
2,753,145 + A4249_RS13620 0.38 -0.4
2,753,145 + A4249_RS13620 0.38 -0.8
2,753,145 + A4249_RS13620 0.38 -0.6
2,753,145 + A4249_RS13620 0.38 -1.3
2,753,146 - A4249_RS13620 0.38 -0.5
2,753,146 - A4249_RS13620 0.38 -0.9
2,753,146 - A4249_RS13620 0.38 -1.1
2,753,146 - A4249_RS13620 0.38 +0.3
2,753,146 - A4249_RS13620 0.38 -1.3
2,753,146 - A4249_RS13620 0.38 -0.1
2,753,146 - A4249_RS13620 0.38 -0.1
2,753,151 + A4249_RS13620 0.39 -1.5
2,753,151 + A4249_RS13620 0.39 -1.9
2,753,151 + A4249_RS13620 0.39 -0.3
2,753,151 + A4249_RS13620 0.39 -0.6
2,753,151 + A4249_RS13620 0.39 -0.9
2,753,151 + A4249_RS13620 0.39 +0.1
2,753,151 + A4249_RS13620 0.39 -0.2
2,753,151 + A4249_RS13620 0.39 +0.3
2,753,151 + A4249_RS13620 0.39 -1.7
2,753,152 - A4249_RS13620 0.39 -0.2
2,753,152 - A4249_RS13620 0.39 +0.4
2,753,152 - A4249_RS13620 0.39 -0.0
2,753,152 - A4249_RS13620 0.39 +0.6

Or see this region's nucleotide sequence