Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13135

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13130 and A4249_RS13135 are separated by 44 nucleotidesA4249_RS13135 and A4249_RS13140 are separated by 24 nucleotides A4249_RS13130: A4249_RS13130 - heat-inducible transcriptional repressor HrcA, at 2,641,102 to 2,642,196 _RS13130 A4249_RS13135: A4249_RS13135 - nucleotide exchange factor GrpE, at 2,642,241 to 2,642,828 _RS13135 A4249_RS13140: A4249_RS13140 - S8 family peptidase, at 2,642,853 to 2,644,895 _RS13140 Position (kb) 2642 2643Strain fitness (log2 ratio) -3 -2 -1 0 1at 2641.410 kb on + strand, within A4249_RS13130at 2641.410 kb on + strand, within A4249_RS13130at 2641.410 kb on + strand, within A4249_RS13130at 2641.410 kb on + strand, within A4249_RS13130at 2641.411 kb on - strand, within A4249_RS13130at 2641.411 kb on - strand, within A4249_RS13130at 2642.059 kb on + strand, within A4249_RS13130at 2642.060 kb on - strand, within A4249_RS13130at 2642.060 kb on - strand, within A4249_RS13130at 2642.060 kb on - strand, within A4249_RS13130at 2642.060 kb on - strand, within A4249_RS13130at 2642.061 kb on + strand, within A4249_RS13130at 2642.061 kb on + strand, within A4249_RS13130at 2642.061 kb on + strand, within A4249_RS13130at 2642.061 kb on + strand, within A4249_RS13130at 2642.061 kb on + strand, within A4249_RS13130at 2642.061 kb on + strand, within A4249_RS13130at 2642.061 kb on + strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.062 kb on - strand, within A4249_RS13130at 2642.102 kb on + strandat 2642.103 kb on - strandat 2642.103 kb on - strandat 2642.103 kb on - strandat 2642.122 kb on + strandat 2642.122 kb on + strandat 2642.122 kb on + strandat 2642.122 kb on + strandat 2642.123 kb on - strandat 2642.149 kb on + strandat 2642.149 kb on + strandat 2642.149 kb on + strandat 2642.149 kb on + strandat 2642.149 kb on + strandat 2642.149 kb on + strandat 2642.149 kb on + strandat 2642.150 kb on - strandat 2642.150 kb on - strandat 2642.150 kb on - strandat 2642.150 kb on - strandat 2642.152 kb on - strandat 2642.221 kb on + strandat 2642.222 kb on - strandat 2642.987 kb on + strandat 2642.988 kb on - strandat 2642.988 kb on - strandat 2643.037 kb on + strandat 2643.037 kb on + strandat 2643.037 kb on + strandat 2643.037 kb on + strandat 2643.037 kb on + strandat 2643.037 kb on + strandat 2643.038 kb on - strandat 2643.055 kb on + strandat 2643.056 kb on - strandat 2643.066 kb on + strand, within A4249_RS13140at 2643.066 kb on + strand, within A4249_RS13140at 2643.066 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.301 kb on + strand, within A4249_RS13140at 2643.302 kb on - strand, within A4249_RS13140at 2643.302 kb on - strand, within A4249_RS13140at 2643.302 kb on - strand, within A4249_RS13140at 2643.302 kb on - strand, within A4249_RS13140at 2643.302 kb on - strand, within A4249_RS13140at 2643.302 kb on - strand, within A4249_RS13140at 2643.440 kb on + strand, within A4249_RS13140at 2643.440 kb on + strand, within A4249_RS13140at 2643.440 kb on + strand, within A4249_RS13140at 2643.441 kb on - strand, within A4249_RS13140at 2643.441 kb on - strand, within A4249_RS13140at 2643.441 kb on - strand, within A4249_RS13140at 2643.441 kb on - strand, within A4249_RS13140at 2643.442 kb on + strand, within A4249_RS13140at 2643.442 kb on + strand, within A4249_RS13140at 2643.442 kb on + strand, within A4249_RS13140at 2643.442 kb on + strand, within A4249_RS13140at 2643.442 kb on + strand, within A4249_RS13140at 2643.442 kb on + strand, within A4249_RS13140at 2643.443 kb on - strand, within A4249_RS13140at 2643.443 kb on - strand, within A4249_RS13140at 2643.443 kb on - strand, within A4249_RS13140at 2643.443 kb on - strand, within A4249_RS13140at 2643.443 kb on - strand, within A4249_RS13140at 2643.709 kb on + strand, within A4249_RS13140at 2643.709 kb on + strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.710 kb on - strand, within A4249_RS13140at 2643.815 kb on + strand, within A4249_RS13140at 2643.815 kb on + strand, within A4249_RS13140at 2643.816 kb on - strand, within A4249_RS13140at 2643.816 kb on - strand, within A4249_RS13140

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,641,410 + A4249_RS13130 0.28 -0.2
2,641,410 + A4249_RS13130 0.28 +0.2
2,641,410 + A4249_RS13130 0.28 +0.8
2,641,410 + A4249_RS13130 0.28 -0.4
2,641,411 - A4249_RS13130 0.28 +0.1
2,641,411 - A4249_RS13130 0.28 +1.1
2,642,059 + A4249_RS13130 0.87 -0.4
2,642,060 - A4249_RS13130 0.87 -0.1
2,642,060 - A4249_RS13130 0.87 +0.9
2,642,060 - A4249_RS13130 0.87 -0.1
2,642,060 - A4249_RS13130 0.87 -0.1
2,642,061 + A4249_RS13130 0.88 +0.4
2,642,061 + A4249_RS13130 0.88 -0.6
2,642,061 + A4249_RS13130 0.88 -0.9
2,642,061 + A4249_RS13130 0.88 +0.8
2,642,061 + A4249_RS13130 0.88 -1.3
2,642,061 + A4249_RS13130 0.88 +0.5
2,642,061 + A4249_RS13130 0.88 +0.9
2,642,062 - A4249_RS13130 0.88 +0.3
2,642,062 - A4249_RS13130 0.88 +0.6
2,642,062 - A4249_RS13130 0.88 +0.8
2,642,062 - A4249_RS13130 0.88 +1.2
2,642,062 - A4249_RS13130 0.88 -0.0
2,642,062 - A4249_RS13130 0.88 -0.2
2,642,062 - A4249_RS13130 0.88 -1.4
2,642,062 - A4249_RS13130 0.88 +1.2
2,642,062 - A4249_RS13130 0.88 -0.1
2,642,062 - A4249_RS13130 0.88 -1.0
2,642,062 - A4249_RS13130 0.88 +0.1
2,642,102 + +1.1
2,642,103 - -0.9
2,642,103 - +0.2
2,642,103 - +0.2
2,642,122 + -0.7
2,642,122 + +0.2
2,642,122 + +0.9
2,642,122 + -0.1
2,642,123 - +0.5
2,642,149 + -1.1
2,642,149 + -0.1
2,642,149 + +0.3
2,642,149 + +0.2
2,642,149 + -0.3
2,642,149 + -0.0
2,642,149 + +0.1
2,642,150 - +1.4
2,642,150 - -0.5
2,642,150 - -0.4
2,642,150 - -2.0
2,642,152 - +1.6
2,642,221 + -0.0
2,642,222 - +0.2
2,642,987 + -0.2
2,642,988 - +0.1
2,642,988 - +0.7
2,643,037 + +0.3
2,643,037 + -0.6
2,643,037 + -1.3
2,643,037 + -0.8
2,643,037 + -0.7
2,643,037 + -0.7
2,643,038 - +0.0
2,643,055 + +0.2
2,643,056 - -3.2
2,643,066 + A4249_RS13140 0.10 -2.0
2,643,066 + A4249_RS13140 0.10 -0.5
2,643,066 + A4249_RS13140 0.10 +0.9
2,643,301 + A4249_RS13140 0.22 -0.1
2,643,301 + A4249_RS13140 0.22 +0.1
2,643,301 + A4249_RS13140 0.22 +1.0
2,643,301 + A4249_RS13140 0.22 +0.4
2,643,301 + A4249_RS13140 0.22 -0.3
2,643,301 + A4249_RS13140 0.22 +0.2
2,643,301 + A4249_RS13140 0.22 -0.9
2,643,301 + A4249_RS13140 0.22 -0.3
2,643,302 - A4249_RS13140 0.22 -2.0
2,643,302 - A4249_RS13140 0.22 -0.9
2,643,302 - A4249_RS13140 0.22 -0.2
2,643,302 - A4249_RS13140 0.22 +0.5
2,643,302 - A4249_RS13140 0.22 +0.4
2,643,302 - A4249_RS13140 0.22 +0.5
2,643,440 + A4249_RS13140 0.29 -1.0
2,643,440 + A4249_RS13140 0.29 -1.1
2,643,440 + A4249_RS13140 0.29 -0.5
2,643,441 - A4249_RS13140 0.29 -0.5
2,643,441 - A4249_RS13140 0.29 -0.0
2,643,441 - A4249_RS13140 0.29 -1.4
2,643,441 - A4249_RS13140 0.29 +0.2
2,643,442 + A4249_RS13140 0.29 -0.6
2,643,442 + A4249_RS13140 0.29 +1.0
2,643,442 + A4249_RS13140 0.29 +0.2
2,643,442 + A4249_RS13140 0.29 -1.8
2,643,442 + A4249_RS13140 0.29 +0.4
2,643,442 + A4249_RS13140 0.29 +1.1
2,643,443 - A4249_RS13140 0.29 -0.2
2,643,443 - A4249_RS13140 0.29 +0.1
2,643,443 - A4249_RS13140 0.29 +0.2
2,643,443 - A4249_RS13140 0.29 -1.6
2,643,443 - A4249_RS13140 0.29 +1.3
2,643,709 + A4249_RS13140 0.42 -1.4
2,643,709 + A4249_RS13140 0.42 +1.2
2,643,710 - A4249_RS13140 0.42 -0.6
2,643,710 - A4249_RS13140 0.42 +0.6
2,643,710 - A4249_RS13140 0.42 +0.8
2,643,710 - A4249_RS13140 0.42 +0.7
2,643,710 - A4249_RS13140 0.42 -1.6
2,643,710 - A4249_RS13140 0.42 -0.1
2,643,710 - A4249_RS13140 0.42 -0.5
2,643,710 - A4249_RS13140 0.42 +0.5
2,643,710 - A4249_RS13140 0.42 +0.4
2,643,815 + A4249_RS13140 0.47 -0.4
2,643,815 + A4249_RS13140 0.47 +0.2
2,643,816 - A4249_RS13140 0.47 -2.0
2,643,816 - A4249_RS13140 0.47 -0.4

Or see this region's nucleotide sequence