Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12525 and A4249_RS12530 are separated by 129 nucleotides A4249_RS12530 and A4249_RS12535 are separated by 4 nucleotides
A4249_RS12525: A4249_RS12525 - M3 family metallopeptidase, at 2,511,464 to 2,513,650
_RS12525
A4249_RS12530: A4249_RS12530 - aspartate/glutamate racemase family protein, at 2,513,780 to 2,514,637
_RS12530
A4249_RS12535: A4249_RS12535 - cation diffusion facilitator family transporter, at 2,514,642 to 2,515,610
_RS12535
Position (kb)
2513
2514
2515 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2513.232 kb on + strand, within A4249_RS12525 at 2513.232 kb on + strand, within A4249_RS12525 at 2513.232 kb on + strand, within A4249_RS12525 at 2513.232 kb on + strand, within A4249_RS12525 at 2513.232 kb on + strand, within A4249_RS12525 at 2513.232 kb on + strand, within A4249_RS12525 at 2513.233 kb on - strand, within A4249_RS12525 at 2513.233 kb on - strand, within A4249_RS12525 at 2513.268 kb on + strand, within A4249_RS12525 at 2513.268 kb on + strand, within A4249_RS12525 at 2513.268 kb on + strand, within A4249_RS12525 at 2513.268 kb on + strand, within A4249_RS12525 at 2513.269 kb on - strand, within A4249_RS12525 at 2513.269 kb on - strand, within A4249_RS12525 at 2513.369 kb on - strand, within A4249_RS12525 at 2513.454 kb on + strand at 2513.454 kb on + strand at 2513.454 kb on + strand at 2513.454 kb on + strand at 2513.454 kb on + strand at 2513.454 kb on + strand at 2513.455 kb on - strand at 2513.455 kb on - strand at 2513.455 kb on - strand at 2513.455 kb on - strand at 2513.644 kb on + strand at 2513.644 kb on + strand at 2513.645 kb on - strand at 2513.645 kb on - strand at 2513.645 kb on - strand at 2513.645 kb on - strand at 2513.645 kb on - strand at 2513.645 kb on - strand at 2513.682 kb on + strand at 2513.682 kb on + strand at 2513.683 kb on - strand at 2513.683 kb on - strand at 2513.688 kb on + strand at 2513.688 kb on + strand at 2513.688 kb on + strand at 2513.689 kb on - strand at 2513.689 kb on - strand at 2513.689 kb on - strand at 2513.689 kb on - strand at 2514.635 kb on + strand at 2514.635 kb on + strand at 2514.635 kb on + strand at 2514.635 kb on + strand at 2514.636 kb on - strand at 2514.636 kb on - strand at 2514.692 kb on + strand at 2514.692 kb on + strand at 2514.692 kb on + strand at 2514.692 kb on + strand at 2514.692 kb on + strand at 2514.693 kb on - strand at 2514.693 kb on - strand at 2514.706 kb on + strand at 2515.069 kb on + strand, within A4249_RS12535 at 2515.070 kb on - strand, within A4249_RS12535 at 2515.070 kb on - strand, within A4249_RS12535 at 2515.070 kb on - strand, within A4249_RS12535 at 2515.070 kb on - strand, within A4249_RS12535 at 2515.291 kb on + strand, within A4249_RS12535 at 2515.291 kb on + strand, within A4249_RS12535 at 2515.292 kb on - strand, within A4249_RS12535 at 2515.292 kb on - strand, within A4249_RS12535 at 2515.292 kb on - strand, within A4249_RS12535 at 2515.292 kb on - strand, within A4249_RS12535 at 2515.385 kb on + strand, within A4249_RS12535 at 2515.385 kb on + strand, within A4249_RS12535 at 2515.385 kb on + strand, within A4249_RS12535 at 2515.385 kb on + strand, within A4249_RS12535 at 2515.385 kb on + strand, within A4249_RS12535 at 2515.386 kb on - strand, within A4249_RS12535 at 2515.450 kb on - strand, within A4249_RS12535 at 2515.450 kb on - strand, within A4249_RS12535 at 2515.483 kb on + strand, within A4249_RS12535 at 2515.483 kb on + strand, within A4249_RS12535 at 2515.517 kb on + strand at 2515.517 kb on + strand at 2515.517 kb on + strand at 2515.517 kb on + strand at 2515.517 kb on + strand at 2515.517 kb on + strand at 2515.517 kb on + strand at 2515.518 kb on - strand at 2515.518 kb on - strand at 2515.518 kb on - strand at 2515.518 kb on - strand at 2515.620 kb on - strand at 2515.620 kb on - strand at 2515.621 kb on + strand at 2515.621 kb on + strand at 2515.621 kb on + strand at 2515.622 kb on - strand at 2515.622 kb on - strand at 2515.622 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,513,232 + A4249_RS12525 0.81 +0.2 2,513,232 + A4249_RS12525 0.81 +0.4 2,513,232 + A4249_RS12525 0.81 +1.8 2,513,232 + A4249_RS12525 0.81 +0.6 2,513,232 + A4249_RS12525 0.81 -0.8 2,513,232 + A4249_RS12525 0.81 -0.6 2,513,233 - A4249_RS12525 0.81 +0.6 2,513,233 - A4249_RS12525 0.81 +0.1 2,513,268 + A4249_RS12525 0.82 +0.2 2,513,268 + A4249_RS12525 0.82 -0.1 2,513,268 + A4249_RS12525 0.82 -0.3 2,513,268 + A4249_RS12525 0.82 +2.2 2,513,269 - A4249_RS12525 0.83 +0.5 2,513,269 - A4249_RS12525 0.83 -0.5 2,513,369 - A4249_RS12525 0.87 +0.4 2,513,454 + -2.5 2,513,454 + -0.5 2,513,454 + +0.5 2,513,454 + -0.2 2,513,454 + +0.6 2,513,454 + -0.2 2,513,455 - -0.3 2,513,455 - +0.6 2,513,455 - -0.1 2,513,455 - +0.0 2,513,644 + +0.8 2,513,644 + -1.7 2,513,645 - +0.0 2,513,645 - -0.3 2,513,645 - -0.2 2,513,645 - +0.3 2,513,645 - +0.3 2,513,645 - +0.8 2,513,682 + +0.6 2,513,682 + +0.9 2,513,683 - +0.1 2,513,683 - -0.8 2,513,688 + +1.3 2,513,688 + +0.5 2,513,688 + +1.2 2,513,689 - -0.2 2,513,689 - +0.3 2,513,689 - +0.0 2,513,689 - +0.4 2,514,635 + +0.3 2,514,635 + +1.0 2,514,635 + -0.5 2,514,635 + +0.2 2,514,636 - +0.7 2,514,636 - -0.7 2,514,692 + -0.2 2,514,692 + +0.3 2,514,692 + -0.1 2,514,692 + +0.0 2,514,692 + -1.1 2,514,693 - -0.7 2,514,693 - -0.6 2,514,706 + -0.1 2,515,069 + A4249_RS12535 0.44 +0.1 2,515,070 - A4249_RS12535 0.44 -0.6 2,515,070 - A4249_RS12535 0.44 -0.2 2,515,070 - A4249_RS12535 0.44 +0.5 2,515,070 - A4249_RS12535 0.44 -0.9 2,515,291 + A4249_RS12535 0.67 +0.4 2,515,291 + A4249_RS12535 0.67 +0.4 2,515,292 - A4249_RS12535 0.67 -0.2 2,515,292 - A4249_RS12535 0.67 +0.3 2,515,292 - A4249_RS12535 0.67 +0.0 2,515,292 - A4249_RS12535 0.67 -0.9 2,515,385 + A4249_RS12535 0.77 -0.5 2,515,385 + A4249_RS12535 0.77 -0.5 2,515,385 + A4249_RS12535 0.77 +0.5 2,515,385 + A4249_RS12535 0.77 +0.1 2,515,385 + A4249_RS12535 0.77 +0.3 2,515,386 - A4249_RS12535 0.77 -1.0 2,515,450 - A4249_RS12535 0.83 +0.0 2,515,450 - A4249_RS12535 0.83 +0.0 2,515,483 + A4249_RS12535 0.87 -0.9 2,515,483 + A4249_RS12535 0.87 +0.7 2,515,517 + -1.6 2,515,517 + +0.3 2,515,517 + -2.0 2,515,517 + -0.6 2,515,517 + +0.7 2,515,517 + -1.3 2,515,517 + +0.9 2,515,518 - +0.1 2,515,518 - -0.1 2,515,518 - -0.3 2,515,518 - +0.0 2,515,620 - -0.8 2,515,620 - +0.5 2,515,621 + -2.1 2,515,621 + +0.3 2,515,621 + +0.3 2,515,622 - -0.4 2,515,622 - -0.0 2,515,622 - +0.3
Or see this region's nucleotide sequence