Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11235 and A4249_RS11240 are separated by 12 nucleotides A4249_RS11240 and A4249_RS11245 are separated by 61 nucleotides A4249_RS11245 and A4249_RS11250 are separated by 242 nucleotides A4249_RS11250 and A4249_RS11255 are separated by 76 nucleotides
A4249_RS11235: A4249_RS11235 - tRNA-Leu, at 2,262,013 to 2,262,097
_RS11235
A4249_RS11240: A4249_RS11240 - alpha/beta hydrolase, at 2,262,110 to 2,262,961
_RS11240
A4249_RS11245: A4249_RS11245 - AsmA family protein, at 2,263,023 to 2,264,993
_RS11245
A4249_RS11250: A4249_RS11250 - hypothetical protein, at 2,265,236 to 2,265,541
_RS11250
A4249_RS11255: A4249_RS11255 - S9 family peptidase, at 2,265,618 to 2,267,729
_RS11255
Position (kb)
2263
2264
2265 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2262.220 kb on - strand, within A4249_RS11240 at 2262.432 kb on + strand, within A4249_RS11240 at 2262.432 kb on + strand, within A4249_RS11240 at 2262.433 kb on - strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.491 kb on - strand, within A4249_RS11240 at 2262.491 kb on - strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.577 kb on - strand, within A4249_RS11240 at 2262.577 kb on - strand, within A4249_RS11240 at 2262.577 kb on - strand, within A4249_RS11240 at 2262.663 kb on + strand, within A4249_RS11240 at 2262.721 kb on - strand, within A4249_RS11240 at 2262.721 kb on - strand, within A4249_RS11240 at 2262.721 kb on - strand, within A4249_RS11240 at 2262.756 kb on + strand, within A4249_RS11240 at 2262.756 kb on + strand, within A4249_RS11240 at 2262.802 kb on - strand, within A4249_RS11240 at 2262.834 kb on + strand, within A4249_RS11240 at 2262.841 kb on + strand, within A4249_RS11240 at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2263.021 kb on + strand at 2263.021 kb on + strand at 2263.021 kb on + strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.663 kb on + strand, within A4249_RS11245 at 2263.664 kb on - strand, within A4249_RS11245 at 2263.664 kb on - strand, within A4249_RS11245 at 2263.826 kb on - strand, within A4249_RS11245 at 2263.835 kb on + strand, within A4249_RS11245 at 2264.013 kb on + strand, within A4249_RS11245 at 2264.013 kb on + strand, within A4249_RS11245 at 2264.141 kb on + strand, within A4249_RS11245 at 2264.141 kb on + strand, within A4249_RS11245 at 2264.142 kb on - strand, within A4249_RS11245 at 2264.142 kb on - strand, within A4249_RS11245 at 2264.142 kb on - strand, within A4249_RS11245 at 2264.142 kb on - strand, within A4249_RS11245 at 2264.170 kb on + strand, within A4249_RS11245 at 2264.170 kb on + strand, within A4249_RS11245 at 2264.170 kb on + strand, within A4249_RS11245 at 2264.170 kb on + strand, within A4249_RS11245 at 2264.170 kb on + strand, within A4249_RS11245 at 2264.170 kb on + strand, within A4249_RS11245 at 2264.171 kb on - strand, within A4249_RS11245 at 2264.171 kb on - strand, within A4249_RS11245 at 2264.726 kb on + strand, within A4249_RS11245 at 2264.726 kb on + strand, within A4249_RS11245 at 2264.726 kb on + strand, within A4249_RS11245 at 2264.806 kb on + strand at 2264.806 kb on + strand at 2264.806 kb on + strand at 2264.806 kb on + strand at 2264.807 kb on - strand at 2264.807 kb on - strand at 2264.807 kb on - strand at 2264.807 kb on - strand at 2264.807 kb on - strand at 2264.807 kb on - strand at 2264.807 kb on - strand at 2264.950 kb on + strand at 2264.951 kb on - strand at 2264.951 kb on - strand at 2265.160 kb on + strand at 2265.160 kb on + strand at 2265.190 kb on - strand at 2265.211 kb on + strand at 2265.212 kb on - strand at 2265.212 kb on - strand at 2265.212 kb on - strand at 2265.212 kb on - strand at 2265.386 kb on + strand, within A4249_RS11250 at 2265.386 kb on + strand, within A4249_RS11250 at 2265.386 kb on + strand, within A4249_RS11250 at 2265.386 kb on + strand, within A4249_RS11250 at 2265.386 kb on + strand, within A4249_RS11250 at 2265.386 kb on + strand, within A4249_RS11250 at 2265.387 kb on - strand, within A4249_RS11250 at 2265.387 kb on - strand, within A4249_RS11250 at 2265.387 kb on - strand, within A4249_RS11250 at 2265.387 kb on - strand, within A4249_RS11250 at 2265.387 kb on - strand, within A4249_RS11250 at 2265.387 kb on - strand, within A4249_RS11250 at 2265.387 kb on - strand, within A4249_RS11250 at 2265.497 kb on + strand, within A4249_RS11250 at 2265.497 kb on + strand, within A4249_RS11250 at 2265.497 kb on + strand, within A4249_RS11250 at 2265.498 kb on - strand, within A4249_RS11250 at 2265.498 kb on - strand, within A4249_RS11250 at 2265.498 kb on - strand, within A4249_RS11250 at 2265.498 kb on - strand, within A4249_RS11250 at 2265.498 kb on - strand, within A4249_RS11250 at 2265.560 kb on - strand at 2265.560 kb on - strand at 2265.560 kb on - strand at 2265.560 kb on - strand at 2265.560 kb on - strand at 2265.619 kb on + strand at 2265.619 kb on + strand at 2265.620 kb on - strand at 2265.637 kb on + strand at 2265.637 kb on + strand at 2265.637 kb on + strand at 2265.637 kb on + strand at 2265.638 kb on - strand at 2265.871 kb on + strand, within A4249_RS11255 at 2265.872 kb on - strand, within A4249_RS11255 at 2265.872 kb on - strand, within A4249_RS11255 at 2265.905 kb on - strand, within A4249_RS11255 at 2265.905 kb on - strand, within A4249_RS11255 at 2265.941 kb on - strand, within A4249_RS11255 at 2265.941 kb on - strand, within A4249_RS11255 at 2265.941 kb on - strand, within A4249_RS11255
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,262,220 - A4249_RS11240 0.13 -1.0 2,262,432 + A4249_RS11240 0.38 +0.6 2,262,432 + A4249_RS11240 0.38 +0.1 2,262,433 - A4249_RS11240 0.38 -1.2 2,262,490 + A4249_RS11240 0.45 +0.2 2,262,490 + A4249_RS11240 0.45 +0.7 2,262,490 + A4249_RS11240 0.45 -0.5 2,262,490 + A4249_RS11240 0.45 -0.0 2,262,491 - A4249_RS11240 0.45 -0.9 2,262,491 - A4249_RS11240 0.45 -1.3 2,262,492 + A4249_RS11240 0.45 -0.2 2,262,492 + A4249_RS11240 0.45 +0.4 2,262,492 + A4249_RS11240 0.45 -0.3 2,262,492 + A4249_RS11240 0.45 -0.6 2,262,492 + A4249_RS11240 0.45 +0.5 2,262,493 - A4249_RS11240 0.45 -1.0 2,262,493 - A4249_RS11240 0.45 -3.3 2,262,493 - A4249_RS11240 0.45 +1.5 2,262,493 - A4249_RS11240 0.45 -0.7 2,262,493 - A4249_RS11240 0.45 +0.1 2,262,493 - A4249_RS11240 0.45 -0.8 2,262,493 - A4249_RS11240 0.45 -1.2 2,262,493 - A4249_RS11240 0.45 +0.0 2,262,577 - A4249_RS11240 0.55 +2.8 2,262,577 - A4249_RS11240 0.55 +1.0 2,262,577 - A4249_RS11240 0.55 -0.8 2,262,663 + A4249_RS11240 0.65 -0.8 2,262,721 - A4249_RS11240 0.72 +0.3 2,262,721 - A4249_RS11240 0.72 -0.2 2,262,721 - A4249_RS11240 0.72 +0.4 2,262,756 + A4249_RS11240 0.76 -0.6 2,262,756 + A4249_RS11240 0.76 +0.1 2,262,802 - A4249_RS11240 0.81 -0.2 2,262,834 + A4249_RS11240 0.85 -0.9 2,262,841 + A4249_RS11240 0.86 -0.5 2,262,985 + +0.2 2,262,985 + +0.4 2,262,985 + -0.9 2,262,985 + -0.5 2,262,985 + +1.4 2,262,985 + +0.1 2,262,985 + +0.2 2,262,985 + -1.1 2,262,985 + -0.8 2,262,986 - -1.4 2,262,986 - +0.0 2,262,986 - +0.4 2,262,986 - -0.2 2,262,986 - -0.3 2,262,986 - +0.9 2,262,986 - +0.8 2,262,986 - +0.5 2,262,986 - -1.7 2,263,021 + +0.2 2,263,021 + -0.4 2,263,021 + -0.6 2,263,022 - +1.6 2,263,022 - +0.5 2,263,022 - -1.3 2,263,022 - -0.3 2,263,022 - -0.4 2,263,022 - +0.4 2,263,022 - -1.0 2,263,022 - +0.3 2,263,022 - +1.0 2,263,663 + A4249_RS11245 0.32 +0.9 2,263,664 - A4249_RS11245 0.33 -0.3 2,263,664 - A4249_RS11245 0.33 +0.3 2,263,826 - A4249_RS11245 0.41 +0.1 2,263,835 + A4249_RS11245 0.41 +0.2 2,264,013 + A4249_RS11245 0.50 +0.6 2,264,013 + A4249_RS11245 0.50 -0.9 2,264,141 + A4249_RS11245 0.57 +0.3 2,264,141 + A4249_RS11245 0.57 -1.0 2,264,142 - A4249_RS11245 0.57 -0.3 2,264,142 - A4249_RS11245 0.57 -0.1 2,264,142 - A4249_RS11245 0.57 +0.6 2,264,142 - A4249_RS11245 0.57 -0.4 2,264,170 + A4249_RS11245 0.58 +0.1 2,264,170 + A4249_RS11245 0.58 +2.5 2,264,170 + A4249_RS11245 0.58 +0.7 2,264,170 + A4249_RS11245 0.58 -1.3 2,264,170 + A4249_RS11245 0.58 -0.9 2,264,170 + A4249_RS11245 0.58 -1.4 2,264,171 - A4249_RS11245 0.58 +0.0 2,264,171 - A4249_RS11245 0.58 -0.5 2,264,726 + A4249_RS11245 0.86 -0.6 2,264,726 + A4249_RS11245 0.86 +0.6 2,264,726 + A4249_RS11245 0.86 -0.2 2,264,806 + -0.8 2,264,806 + -0.2 2,264,806 + +1.8 2,264,806 + -0.2 2,264,807 - +0.1 2,264,807 - -0.1 2,264,807 - -1.2 2,264,807 - +0.4 2,264,807 - +0.4 2,264,807 - -1.1 2,264,807 - -0.3 2,264,950 + +0.5 2,264,951 - +0.3 2,264,951 - -0.2 2,265,160 + +0.7 2,265,160 + +0.4 2,265,190 - +0.0 2,265,211 + -0.9 2,265,212 - -0.5 2,265,212 - -1.7 2,265,212 - +1.1 2,265,212 - +0.5 2,265,386 + A4249_RS11250 0.49 -0.4 2,265,386 + A4249_RS11250 0.49 -0.4 2,265,386 + A4249_RS11250 0.49 -0.5 2,265,386 + A4249_RS11250 0.49 -1.1 2,265,386 + A4249_RS11250 0.49 +0.3 2,265,386 + A4249_RS11250 0.49 -0.5 2,265,387 - A4249_RS11250 0.49 -2.2 2,265,387 - A4249_RS11250 0.49 -1.0 2,265,387 - A4249_RS11250 0.49 +0.8 2,265,387 - A4249_RS11250 0.49 -0.5 2,265,387 - A4249_RS11250 0.49 -0.4 2,265,387 - A4249_RS11250 0.49 -0.0 2,265,387 - A4249_RS11250 0.49 -0.4 2,265,497 + A4249_RS11250 0.85 -0.2 2,265,497 + A4249_RS11250 0.85 -0.2 2,265,497 + A4249_RS11250 0.85 -1.1 2,265,498 - A4249_RS11250 0.86 -0.9 2,265,498 - A4249_RS11250 0.86 +0.4 2,265,498 - A4249_RS11250 0.86 -0.1 2,265,498 - A4249_RS11250 0.86 -0.5 2,265,498 - A4249_RS11250 0.86 +0.6 2,265,560 - -0.9 2,265,560 - -1.8 2,265,560 - +0.1 2,265,560 - +0.1 2,265,560 - -0.1 2,265,619 + +0.1 2,265,619 + +0.9 2,265,620 - -0.9 2,265,637 + +0.6 2,265,637 + +0.2 2,265,637 + +0.0 2,265,637 + -0.2 2,265,638 - +0.3 2,265,871 + A4249_RS11255 0.12 -1.1 2,265,872 - A4249_RS11255 0.12 -0.2 2,265,872 - A4249_RS11255 0.12 -0.8 2,265,905 - A4249_RS11255 0.14 +0.9 2,265,905 - A4249_RS11255 0.14 +0.6 2,265,941 - A4249_RS11255 0.15 -0.6 2,265,941 - A4249_RS11255 0.15 +1.1 2,265,941 - A4249_RS11255 0.15 +0.5
Or see this region's nucleotide sequence