Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11025 and A4249_RS11030 are separated by 222 nucleotides A4249_RS11030 and A4249_RS11035 overlap by 4 nucleotides A4249_RS11035 and A4249_RS11040 are separated by 60 nucleotides
A4249_RS11025: A4249_RS11025 - serine hydrolase, at 2,218,110 to 2,219,750
_RS11025
A4249_RS11030: A4249_RS11030 - hypothetical protein, at 2,219,973 to 2,220,314
_RS11030
A4249_RS11035: A4249_RS11035 - DUF4893 domain-containing protein, at 2,220,311 to 2,221,054
_RS11035
A4249_RS11040: A4249_RS11040 - DUF4893 domain-containing protein, at 2,221,115 to 2,221,789
_RS11040
Position (kb)
2219
2220
2221 Strain fitness (log2 ratio)
-2
-1
0
1 at 2219.019 kb on + strand, within A4249_RS11025 at 2219.020 kb on - strand, within A4249_RS11025 at 2219.020 kb on - strand, within A4249_RS11025 at 2219.020 kb on - strand, within A4249_RS11025 at 2219.046 kb on + strand, within A4249_RS11025 at 2219.046 kb on + strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.047 kb on - strand, within A4249_RS11025 at 2219.064 kb on + strand, within A4249_RS11025 at 2219.065 kb on + strand, within A4249_RS11025 at 2219.066 kb on - strand, within A4249_RS11025 at 2219.066 kb on - strand, within A4249_RS11025 at 2219.066 kb on - strand, within A4249_RS11025 at 2219.121 kb on + strand, within A4249_RS11025 at 2219.121 kb on + strand, within A4249_RS11025 at 2219.121 kb on + strand, within A4249_RS11025 at 2219.121 kb on + strand, within A4249_RS11025 at 2219.121 kb on + strand, within A4249_RS11025 at 2219.121 kb on + strand, within A4249_RS11025 at 2219.121 kb on + strand, within A4249_RS11025 at 2219.122 kb on - strand, within A4249_RS11025 at 2219.122 kb on - strand, within A4249_RS11025 at 2219.122 kb on - strand, within A4249_RS11025 at 2219.122 kb on - strand, within A4249_RS11025 at 2219.122 kb on - strand, within A4249_RS11025 at 2219.148 kb on + strand, within A4249_RS11025 at 2219.148 kb on + strand, within A4249_RS11025 at 2219.149 kb on - strand, within A4249_RS11025 at 2219.445 kb on + strand, within A4249_RS11025 at 2219.472 kb on + strand, within A4249_RS11025 at 2219.473 kb on - strand, within A4249_RS11025 at 2219.584 kb on - strand, within A4249_RS11025 at 2219.715 kb on + strand at 2219.715 kb on + strand at 2219.716 kb on - strand at 2219.716 kb on - strand at 2219.716 kb on - strand at 2219.721 kb on + strand at 2219.721 kb on + strand at 2219.721 kb on + strand at 2219.722 kb on - strand at 2219.722 kb on - strand at 2219.722 kb on - strand at 2219.722 kb on - strand at 2220.095 kb on + strand, within A4249_RS11030 at 2220.095 kb on + strand, within A4249_RS11030 at 2220.107 kb on + strand, within A4249_RS11030 at 2220.107 kb on + strand, within A4249_RS11030 at 2220.108 kb on - strand, within A4249_RS11030 at 2220.108 kb on - strand, within A4249_RS11030 at 2220.389 kb on + strand, within A4249_RS11035 at 2220.390 kb on - strand, within A4249_RS11035 at 2220.390 kb on - strand, within A4249_RS11035 at 2220.435 kb on + strand, within A4249_RS11035 at 2220.435 kb on + strand, within A4249_RS11035 at 2220.436 kb on - strand, within A4249_RS11035 at 2220.483 kb on + strand, within A4249_RS11035 at 2220.483 kb on + strand, within A4249_RS11035 at 2220.483 kb on + strand, within A4249_RS11035 at 2220.483 kb on + strand, within A4249_RS11035 at 2220.483 kb on + strand, within A4249_RS11035 at 2220.484 kb on - strand, within A4249_RS11035 at 2220.511 kb on - strand, within A4249_RS11035 at 2220.511 kb on - strand, within A4249_RS11035 at 2220.603 kb on + strand, within A4249_RS11035 at 2220.612 kb on + strand, within A4249_RS11035 at 2220.612 kb on + strand, within A4249_RS11035 at 2220.612 kb on + strand, within A4249_RS11035 at 2220.612 kb on + strand, within A4249_RS11035 at 2220.612 kb on + strand, within A4249_RS11035 at 2220.612 kb on + strand, within A4249_RS11035 at 2220.613 kb on - strand, within A4249_RS11035 at 2220.613 kb on - strand, within A4249_RS11035 at 2220.613 kb on - strand, within A4249_RS11035 at 2220.613 kb on - strand, within A4249_RS11035 at 2220.613 kb on - strand, within A4249_RS11035 at 2220.613 kb on - strand, within A4249_RS11035 at 2220.666 kb on + strand, within A4249_RS11035 at 2220.667 kb on - strand, within A4249_RS11035 at 2220.667 kb on - strand, within A4249_RS11035 at 2220.667 kb on - strand, within A4249_RS11035 at 2220.667 kb on - strand, within A4249_RS11035 at 2221.116 kb on + strand at 2221.251 kb on + strand, within A4249_RS11040 at 2221.251 kb on + strand, within A4249_RS11040 at 2221.251 kb on + strand, within A4249_RS11040 at 2221.251 kb on + strand, within A4249_RS11040 at 2221.251 kb on + strand, within A4249_RS11040 at 2221.252 kb on - strand, within A4249_RS11040 at 2221.252 kb on - strand, within A4249_RS11040 at 2221.252 kb on - strand, within A4249_RS11040 at 2221.252 kb on - strand, within A4249_RS11040 at 2221.252 kb on - strand, within A4249_RS11040 at 2221.303 kb on + strand, within A4249_RS11040 at 2221.303 kb on + strand, within A4249_RS11040 at 2221.303 kb on + strand, within A4249_RS11040 at 2221.303 kb on + strand, within A4249_RS11040 at 2221.303 kb on + strand, within A4249_RS11040 at 2221.303 kb on + strand, within A4249_RS11040 at 2221.304 kb on - strand, within A4249_RS11040 at 2221.304 kb on - strand, within A4249_RS11040 at 2221.304 kb on - strand, within A4249_RS11040 at 2221.304 kb on - strand, within A4249_RS11040 at 2221.304 kb on - strand, within A4249_RS11040
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,219,019 + A4249_RS11025 0.55 -0.3 2,219,020 - A4249_RS11025 0.55 -1.1 2,219,020 - A4249_RS11025 0.55 -0.5 2,219,020 - A4249_RS11025 0.55 -0.5 2,219,046 + A4249_RS11025 0.57 +0.1 2,219,046 + A4249_RS11025 0.57 +0.9 2,219,047 - A4249_RS11025 0.57 -1.9 2,219,047 - A4249_RS11025 0.57 -0.9 2,219,047 - A4249_RS11025 0.57 -0.7 2,219,047 - A4249_RS11025 0.57 +0.4 2,219,047 - A4249_RS11025 0.57 -0.5 2,219,047 - A4249_RS11025 0.57 +0.1 2,219,047 - A4249_RS11025 0.57 -0.4 2,219,047 - A4249_RS11025 0.57 +0.5 2,219,047 - A4249_RS11025 0.57 +0.2 2,219,064 + A4249_RS11025 0.58 +0.0 2,219,065 + A4249_RS11025 0.58 -0.8 2,219,066 - A4249_RS11025 0.58 +0.5 2,219,066 - A4249_RS11025 0.58 -1.6 2,219,066 - A4249_RS11025 0.58 -1.7 2,219,121 + A4249_RS11025 0.62 -0.4 2,219,121 + A4249_RS11025 0.62 -0.3 2,219,121 + A4249_RS11025 0.62 +0.2 2,219,121 + A4249_RS11025 0.62 -0.6 2,219,121 + A4249_RS11025 0.62 +0.1 2,219,121 + A4249_RS11025 0.62 +0.8 2,219,121 + A4249_RS11025 0.62 -1.0 2,219,122 - A4249_RS11025 0.62 -0.6 2,219,122 - A4249_RS11025 0.62 -1.0 2,219,122 - A4249_RS11025 0.62 +1.5 2,219,122 - A4249_RS11025 0.62 -0.6 2,219,122 - A4249_RS11025 0.62 +0.2 2,219,148 + A4249_RS11025 0.63 -0.3 2,219,148 + A4249_RS11025 0.63 -0.5 2,219,149 - A4249_RS11025 0.63 -0.4 2,219,445 + A4249_RS11025 0.81 +0.6 2,219,472 + A4249_RS11025 0.83 -0.2 2,219,473 - A4249_RS11025 0.83 -0.8 2,219,584 - A4249_RS11025 0.90 -0.5 2,219,715 + +0.4 2,219,715 + +0.3 2,219,716 - +0.9 2,219,716 - +0.6 2,219,716 - -0.7 2,219,721 + +0.9 2,219,721 + -0.1 2,219,721 + +0.1 2,219,722 - +0.4 2,219,722 - +0.7 2,219,722 - +0.6 2,219,722 - +0.2 2,220,095 + A4249_RS11030 0.36 +0.0 2,220,095 + A4249_RS11030 0.36 -0.7 2,220,107 + A4249_RS11030 0.39 -1.1 2,220,107 + A4249_RS11030 0.39 -0.8 2,220,108 - A4249_RS11030 0.39 -0.4 2,220,108 - A4249_RS11030 0.39 -0.9 2,220,389 + A4249_RS11035 0.10 +0.5 2,220,390 - A4249_RS11035 0.11 -0.1 2,220,390 - A4249_RS11035 0.11 +0.5 2,220,435 + A4249_RS11035 0.17 -0.6 2,220,435 + A4249_RS11035 0.17 -0.3 2,220,436 - A4249_RS11035 0.17 -0.8 2,220,483 + A4249_RS11035 0.23 +0.4 2,220,483 + A4249_RS11035 0.23 +0.3 2,220,483 + A4249_RS11035 0.23 -0.4 2,220,483 + A4249_RS11035 0.23 -0.7 2,220,483 + A4249_RS11035 0.23 -1.4 2,220,484 - A4249_RS11035 0.23 -0.8 2,220,511 - A4249_RS11035 0.27 +0.2 2,220,511 - A4249_RS11035 0.27 -0.5 2,220,603 + A4249_RS11035 0.39 +0.7 2,220,612 + A4249_RS11035 0.40 -1.1 2,220,612 + A4249_RS11035 0.40 +0.4 2,220,612 + A4249_RS11035 0.40 -1.2 2,220,612 + A4249_RS11035 0.40 -0.1 2,220,612 + A4249_RS11035 0.40 -0.6 2,220,612 + A4249_RS11035 0.40 -0.6 2,220,613 - A4249_RS11035 0.41 +0.4 2,220,613 - A4249_RS11035 0.41 +0.3 2,220,613 - A4249_RS11035 0.41 +0.2 2,220,613 - A4249_RS11035 0.41 +1.1 2,220,613 - A4249_RS11035 0.41 -0.3 2,220,613 - A4249_RS11035 0.41 -0.7 2,220,666 + A4249_RS11035 0.48 -0.1 2,220,667 - A4249_RS11035 0.48 -1.8 2,220,667 - A4249_RS11035 0.48 -0.6 2,220,667 - A4249_RS11035 0.48 +0.4 2,220,667 - A4249_RS11035 0.48 +1.5 2,221,116 + +0.1 2,221,251 + A4249_RS11040 0.20 -0.4 2,221,251 + A4249_RS11040 0.20 +0.5 2,221,251 + A4249_RS11040 0.20 -0.3 2,221,251 + A4249_RS11040 0.20 +0.5 2,221,251 + A4249_RS11040 0.20 -0.3 2,221,252 - A4249_RS11040 0.20 -1.2 2,221,252 - A4249_RS11040 0.20 -0.6 2,221,252 - A4249_RS11040 0.20 -0.3 2,221,252 - A4249_RS11040 0.20 -2.3 2,221,252 - A4249_RS11040 0.20 -0.2 2,221,303 + A4249_RS11040 0.28 -0.8 2,221,303 + A4249_RS11040 0.28 -2.1 2,221,303 + A4249_RS11040 0.28 -0.4 2,221,303 + A4249_RS11040 0.28 -0.1 2,221,303 + A4249_RS11040 0.28 -1.3 2,221,303 + A4249_RS11040 0.28 -0.2 2,221,304 - A4249_RS11040 0.28 +1.6 2,221,304 - A4249_RS11040 0.28 +0.6 2,221,304 - A4249_RS11040 0.28 -0.4 2,221,304 - A4249_RS11040 0.28 +0.0 2,221,304 - A4249_RS11040 0.28 +0.2
Or see this region's nucleotide sequence