Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11030

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11025 and A4249_RS11030 are separated by 222 nucleotidesA4249_RS11030 and A4249_RS11035 overlap by 4 nucleotidesA4249_RS11035 and A4249_RS11040 are separated by 60 nucleotides A4249_RS11025: A4249_RS11025 - serine hydrolase, at 2,218,110 to 2,219,750 _RS11025 A4249_RS11030: A4249_RS11030 - hypothetical protein, at 2,219,973 to 2,220,314 _RS11030 A4249_RS11035: A4249_RS11035 - DUF4893 domain-containing protein, at 2,220,311 to 2,221,054 _RS11035 A4249_RS11040: A4249_RS11040 - DUF4893 domain-containing protein, at 2,221,115 to 2,221,789 _RS11040 Position (kb) 2219 2220 2221Strain fitness (log2 ratio) -2 -1 0 1at 2219.019 kb on + strand, within A4249_RS11025at 2219.020 kb on - strand, within A4249_RS11025at 2219.020 kb on - strand, within A4249_RS11025at 2219.020 kb on - strand, within A4249_RS11025at 2219.046 kb on + strand, within A4249_RS11025at 2219.046 kb on + strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.047 kb on - strand, within A4249_RS11025at 2219.064 kb on + strand, within A4249_RS11025at 2219.065 kb on + strand, within A4249_RS11025at 2219.066 kb on - strand, within A4249_RS11025at 2219.066 kb on - strand, within A4249_RS11025at 2219.066 kb on - strand, within A4249_RS11025at 2219.121 kb on + strand, within A4249_RS11025at 2219.121 kb on + strand, within A4249_RS11025at 2219.121 kb on + strand, within A4249_RS11025at 2219.121 kb on + strand, within A4249_RS11025at 2219.121 kb on + strand, within A4249_RS11025at 2219.121 kb on + strand, within A4249_RS11025at 2219.121 kb on + strand, within A4249_RS11025at 2219.122 kb on - strand, within A4249_RS11025at 2219.122 kb on - strand, within A4249_RS11025at 2219.122 kb on - strand, within A4249_RS11025at 2219.122 kb on - strand, within A4249_RS11025at 2219.122 kb on - strand, within A4249_RS11025at 2219.148 kb on + strand, within A4249_RS11025at 2219.148 kb on + strand, within A4249_RS11025at 2219.149 kb on - strand, within A4249_RS11025at 2219.445 kb on + strand, within A4249_RS11025at 2219.472 kb on + strand, within A4249_RS11025at 2219.473 kb on - strand, within A4249_RS11025at 2219.584 kb on - strand, within A4249_RS11025at 2219.715 kb on + strandat 2219.715 kb on + strandat 2219.716 kb on - strandat 2219.716 kb on - strandat 2219.716 kb on - strandat 2219.721 kb on + strandat 2219.721 kb on + strandat 2219.721 kb on + strandat 2219.722 kb on - strandat 2219.722 kb on - strandat 2219.722 kb on - strandat 2219.722 kb on - strandat 2220.095 kb on + strand, within A4249_RS11030at 2220.095 kb on + strand, within A4249_RS11030at 2220.107 kb on + strand, within A4249_RS11030at 2220.107 kb on + strand, within A4249_RS11030at 2220.108 kb on - strand, within A4249_RS11030at 2220.108 kb on - strand, within A4249_RS11030at 2220.389 kb on + strand, within A4249_RS11035at 2220.390 kb on - strand, within A4249_RS11035at 2220.390 kb on - strand, within A4249_RS11035at 2220.435 kb on + strand, within A4249_RS11035at 2220.435 kb on + strand, within A4249_RS11035at 2220.436 kb on - strand, within A4249_RS11035at 2220.483 kb on + strand, within A4249_RS11035at 2220.483 kb on + strand, within A4249_RS11035at 2220.483 kb on + strand, within A4249_RS11035at 2220.483 kb on + strand, within A4249_RS11035at 2220.483 kb on + strand, within A4249_RS11035at 2220.484 kb on - strand, within A4249_RS11035at 2220.511 kb on - strand, within A4249_RS11035at 2220.511 kb on - strand, within A4249_RS11035at 2220.603 kb on + strand, within A4249_RS11035at 2220.612 kb on + strand, within A4249_RS11035at 2220.612 kb on + strand, within A4249_RS11035at 2220.612 kb on + strand, within A4249_RS11035at 2220.612 kb on + strand, within A4249_RS11035at 2220.612 kb on + strand, within A4249_RS11035at 2220.612 kb on + strand, within A4249_RS11035at 2220.613 kb on - strand, within A4249_RS11035at 2220.613 kb on - strand, within A4249_RS11035at 2220.613 kb on - strand, within A4249_RS11035at 2220.613 kb on - strand, within A4249_RS11035at 2220.613 kb on - strand, within A4249_RS11035at 2220.613 kb on - strand, within A4249_RS11035at 2220.666 kb on + strand, within A4249_RS11035at 2220.667 kb on - strand, within A4249_RS11035at 2220.667 kb on - strand, within A4249_RS11035at 2220.667 kb on - strand, within A4249_RS11035at 2220.667 kb on - strand, within A4249_RS11035at 2221.116 kb on + strandat 2221.251 kb on + strand, within A4249_RS11040at 2221.251 kb on + strand, within A4249_RS11040at 2221.251 kb on + strand, within A4249_RS11040at 2221.251 kb on + strand, within A4249_RS11040at 2221.251 kb on + strand, within A4249_RS11040at 2221.252 kb on - strand, within A4249_RS11040at 2221.252 kb on - strand, within A4249_RS11040at 2221.252 kb on - strand, within A4249_RS11040at 2221.252 kb on - strand, within A4249_RS11040at 2221.252 kb on - strand, within A4249_RS11040at 2221.303 kb on + strand, within A4249_RS11040at 2221.303 kb on + strand, within A4249_RS11040at 2221.303 kb on + strand, within A4249_RS11040at 2221.303 kb on + strand, within A4249_RS11040at 2221.303 kb on + strand, within A4249_RS11040at 2221.303 kb on + strand, within A4249_RS11040at 2221.304 kb on - strand, within A4249_RS11040at 2221.304 kb on - strand, within A4249_RS11040at 2221.304 kb on - strand, within A4249_RS11040at 2221.304 kb on - strand, within A4249_RS11040at 2221.304 kb on - strand, within A4249_RS11040

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,219,019 + A4249_RS11025 0.55 -0.3
2,219,020 - A4249_RS11025 0.55 -1.1
2,219,020 - A4249_RS11025 0.55 -0.5
2,219,020 - A4249_RS11025 0.55 -0.5
2,219,046 + A4249_RS11025 0.57 +0.1
2,219,046 + A4249_RS11025 0.57 +0.9
2,219,047 - A4249_RS11025 0.57 -1.9
2,219,047 - A4249_RS11025 0.57 -0.9
2,219,047 - A4249_RS11025 0.57 -0.7
2,219,047 - A4249_RS11025 0.57 +0.4
2,219,047 - A4249_RS11025 0.57 -0.5
2,219,047 - A4249_RS11025 0.57 +0.1
2,219,047 - A4249_RS11025 0.57 -0.4
2,219,047 - A4249_RS11025 0.57 +0.5
2,219,047 - A4249_RS11025 0.57 +0.2
2,219,064 + A4249_RS11025 0.58 +0.0
2,219,065 + A4249_RS11025 0.58 -0.8
2,219,066 - A4249_RS11025 0.58 +0.5
2,219,066 - A4249_RS11025 0.58 -1.6
2,219,066 - A4249_RS11025 0.58 -1.7
2,219,121 + A4249_RS11025 0.62 -0.4
2,219,121 + A4249_RS11025 0.62 -0.3
2,219,121 + A4249_RS11025 0.62 +0.2
2,219,121 + A4249_RS11025 0.62 -0.6
2,219,121 + A4249_RS11025 0.62 +0.1
2,219,121 + A4249_RS11025 0.62 +0.8
2,219,121 + A4249_RS11025 0.62 -1.0
2,219,122 - A4249_RS11025 0.62 -0.6
2,219,122 - A4249_RS11025 0.62 -1.0
2,219,122 - A4249_RS11025 0.62 +1.5
2,219,122 - A4249_RS11025 0.62 -0.6
2,219,122 - A4249_RS11025 0.62 +0.2
2,219,148 + A4249_RS11025 0.63 -0.3
2,219,148 + A4249_RS11025 0.63 -0.5
2,219,149 - A4249_RS11025 0.63 -0.4
2,219,445 + A4249_RS11025 0.81 +0.6
2,219,472 + A4249_RS11025 0.83 -0.2
2,219,473 - A4249_RS11025 0.83 -0.8
2,219,584 - A4249_RS11025 0.90 -0.5
2,219,715 + +0.4
2,219,715 + +0.3
2,219,716 - +0.9
2,219,716 - +0.6
2,219,716 - -0.7
2,219,721 + +0.9
2,219,721 + -0.1
2,219,721 + +0.1
2,219,722 - +0.4
2,219,722 - +0.7
2,219,722 - +0.6
2,219,722 - +0.2
2,220,095 + A4249_RS11030 0.36 +0.0
2,220,095 + A4249_RS11030 0.36 -0.7
2,220,107 + A4249_RS11030 0.39 -1.1
2,220,107 + A4249_RS11030 0.39 -0.8
2,220,108 - A4249_RS11030 0.39 -0.4
2,220,108 - A4249_RS11030 0.39 -0.9
2,220,389 + A4249_RS11035 0.10 +0.5
2,220,390 - A4249_RS11035 0.11 -0.1
2,220,390 - A4249_RS11035 0.11 +0.5
2,220,435 + A4249_RS11035 0.17 -0.6
2,220,435 + A4249_RS11035 0.17 -0.3
2,220,436 - A4249_RS11035 0.17 -0.8
2,220,483 + A4249_RS11035 0.23 +0.4
2,220,483 + A4249_RS11035 0.23 +0.3
2,220,483 + A4249_RS11035 0.23 -0.4
2,220,483 + A4249_RS11035 0.23 -0.7
2,220,483 + A4249_RS11035 0.23 -1.4
2,220,484 - A4249_RS11035 0.23 -0.8
2,220,511 - A4249_RS11035 0.27 +0.2
2,220,511 - A4249_RS11035 0.27 -0.5
2,220,603 + A4249_RS11035 0.39 +0.7
2,220,612 + A4249_RS11035 0.40 -1.1
2,220,612 + A4249_RS11035 0.40 +0.4
2,220,612 + A4249_RS11035 0.40 -1.2
2,220,612 + A4249_RS11035 0.40 -0.1
2,220,612 + A4249_RS11035 0.40 -0.6
2,220,612 + A4249_RS11035 0.40 -0.6
2,220,613 - A4249_RS11035 0.41 +0.4
2,220,613 - A4249_RS11035 0.41 +0.3
2,220,613 - A4249_RS11035 0.41 +0.2
2,220,613 - A4249_RS11035 0.41 +1.1
2,220,613 - A4249_RS11035 0.41 -0.3
2,220,613 - A4249_RS11035 0.41 -0.7
2,220,666 + A4249_RS11035 0.48 -0.1
2,220,667 - A4249_RS11035 0.48 -1.8
2,220,667 - A4249_RS11035 0.48 -0.6
2,220,667 - A4249_RS11035 0.48 +0.4
2,220,667 - A4249_RS11035 0.48 +1.5
2,221,116 + +0.1
2,221,251 + A4249_RS11040 0.20 -0.4
2,221,251 + A4249_RS11040 0.20 +0.5
2,221,251 + A4249_RS11040 0.20 -0.3
2,221,251 + A4249_RS11040 0.20 +0.5
2,221,251 + A4249_RS11040 0.20 -0.3
2,221,252 - A4249_RS11040 0.20 -1.2
2,221,252 - A4249_RS11040 0.20 -0.6
2,221,252 - A4249_RS11040 0.20 -0.3
2,221,252 - A4249_RS11040 0.20 -2.3
2,221,252 - A4249_RS11040 0.20 -0.2
2,221,303 + A4249_RS11040 0.28 -0.8
2,221,303 + A4249_RS11040 0.28 -2.1
2,221,303 + A4249_RS11040 0.28 -0.4
2,221,303 + A4249_RS11040 0.28 -0.1
2,221,303 + A4249_RS11040 0.28 -1.3
2,221,303 + A4249_RS11040 0.28 -0.2
2,221,304 - A4249_RS11040 0.28 +1.6
2,221,304 - A4249_RS11040 0.28 +0.6
2,221,304 - A4249_RS11040 0.28 -0.4
2,221,304 - A4249_RS11040 0.28 +0.0
2,221,304 - A4249_RS11040 0.28 +0.2

Or see this region's nucleotide sequence