Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10515

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10510 and A4249_RS10515 are separated by 145 nucleotidesA4249_RS10515 and A4249_RS10520 are separated by 61 nucleotidesA4249_RS10520 and A4249_RS10525 are separated by 186 nucleotides A4249_RS10510: A4249_RS10510 - hypothetical protein, at 2,113,575 to 2,114,453 _RS10510 A4249_RS10515: A4249_RS10515 - tRNA dihydrouridine(20/20a) synthase DusA, at 2,114,599 to 2,115,630 _RS10515 A4249_RS10520: A4249_RS10520 - hypothetical protein, at 2,115,692 to 2,116,360 _RS10520 A4249_RS10525: A4249_RS10525 - 3D domain-containing protein, at 2,116,547 to 2,117,104 _RS10525 Position (kb) 2114 2115 2116Strain fitness (log2 ratio) -2 -1 0 1 2at 2113.653 kb on + strandat 2113.653 kb on + strandat 2113.653 kb on + strandat 2113.654 kb on - strandat 2113.857 kb on + strand, within A4249_RS10510at 2113.858 kb on - strand, within A4249_RS10510at 2113.887 kb on + strand, within A4249_RS10510at 2113.888 kb on - strand, within A4249_RS10510at 2113.888 kb on - strand, within A4249_RS10510at 2113.938 kb on + strand, within A4249_RS10510at 2114.094 kb on + strand, within A4249_RS10510at 2114.095 kb on - strand, within A4249_RS10510at 2114.095 kb on - strand, within A4249_RS10510at 2114.124 kb on + strand, within A4249_RS10510at 2114.125 kb on - strand, within A4249_RS10510at 2114.370 kb on + strandat 2114.371 kb on - strandat 2114.406 kb on + strandat 2114.451 kb on + strandat 2114.452 kb on - strandat 2114.502 kb on + strandat 2114.551 kb on + strandat 2114.598 kb on + strandat 2114.598 kb on + strandat 2114.598 kb on + strandat 2114.598 kb on + strandat 2114.598 kb on + strandat 2114.598 kb on + strandat 2114.598 kb on + strandat 2114.598 kb on + strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.599 kb on - strandat 2114.659 kb on + strandat 2114.659 kb on + strandat 2114.659 kb on + strandat 2114.704 kb on + strand, within A4249_RS10515at 2114.704 kb on + strand, within A4249_RS10515at 2114.704 kb on + strand, within A4249_RS10515at 2114.704 kb on + strand, within A4249_RS10515at 2114.705 kb on - strand, within A4249_RS10515at 2114.705 kb on - strand, within A4249_RS10515at 2114.705 kb on - strand, within A4249_RS10515at 2114.705 kb on - strand, within A4249_RS10515at 2114.705 kb on - strand, within A4249_RS10515at 2114.857 kb on + strand, within A4249_RS10515at 2114.858 kb on - strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.958 kb on + strand, within A4249_RS10515at 2114.959 kb on - strand, within A4249_RS10515at 2114.959 kb on - strand, within A4249_RS10515at 2114.959 kb on - strand, within A4249_RS10515at 2114.959 kb on - strand, within A4249_RS10515at 2115.163 kb on + strand, within A4249_RS10515at 2115.163 kb on + strand, within A4249_RS10515at 2115.163 kb on + strand, within A4249_RS10515at 2115.163 kb on + strand, within A4249_RS10515at 2115.163 kb on + strand, within A4249_RS10515at 2115.163 kb on + strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.164 kb on - strand, within A4249_RS10515at 2115.310 kb on + strand, within A4249_RS10515at 2115.311 kb on - strand, within A4249_RS10515at 2115.409 kb on + strand, within A4249_RS10515at 2115.410 kb on - strand, within A4249_RS10515at 2115.410 kb on - strand, within A4249_RS10515at 2115.410 kb on - strand, within A4249_RS10515at 2115.410 kb on - strand, within A4249_RS10515at 2115.410 kb on - strand, within A4249_RS10515at 2115.410 kb on - strand, within A4249_RS10515at 2115.411 kb on + strand, within A4249_RS10515at 2115.412 kb on - strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.462 kb on + strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.463 kb on - strand, within A4249_RS10515at 2115.628 kb on + strandat 2115.629 kb on - strandat 2115.659 kb on + strandat 2115.659 kb on + strandat 2115.857 kb on + strand, within A4249_RS10520at 2115.857 kb on + strand, within A4249_RS10520at 2115.858 kb on - strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.890 kb on + strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.891 kb on - strand, within A4249_RS10520at 2115.906 kb on - strand, within A4249_RS10520at 2115.992 kb on + strand, within A4249_RS10520at 2115.992 kb on + strand, within A4249_RS10520at 2115.992 kb on + strand, within A4249_RS10520at 2115.992 kb on + strand, within A4249_RS10520at 2115.993 kb on - strand, within A4249_RS10520at 2115.993 kb on - strand, within A4249_RS10520at 2115.993 kb on - strand, within A4249_RS10520at 2116.136 kb on + strand, within A4249_RS10520at 2116.137 kb on - strand, within A4249_RS10520at 2116.151 kb on - strand, within A4249_RS10520at 2116.255 kb on + strand, within A4249_RS10520at 2116.255 kb on + strand, within A4249_RS10520at 2116.255 kb on + strand, within A4249_RS10520at 2116.255 kb on + strand, within A4249_RS10520at 2116.256 kb on - strand, within A4249_RS10520at 2116.256 kb on - strand, within A4249_RS10520at 2116.256 kb on - strand, within A4249_RS10520at 2116.256 kb on - strand, within A4249_RS10520at 2116.313 kb on + strandat 2116.313 kb on + strandat 2116.313 kb on + strandat 2116.313 kb on + strandat 2116.313 kb on + strandat 2116.314 kb on - strandat 2116.314 kb on - strandat 2116.314 kb on - strandat 2116.314 kb on - strandat 2116.314 kb on - strandat 2116.314 kb on - strandat 2116.314 kb on - strandat 2116.314 kb on - strandat 2116.400 kb on - strandat 2116.403 kb on + strandat 2116.403 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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2,113,653 + -0.2
2,113,653 + -0.1
2,113,653 + -0.1
2,113,654 - -1.6
2,113,857 + A4249_RS10510 0.32 -0.3
2,113,858 - A4249_RS10510 0.32 +1.3
2,113,887 + A4249_RS10510 0.35 +0.2
2,113,888 - A4249_RS10510 0.36 -0.3
2,113,888 - A4249_RS10510 0.36 +1.1
2,113,938 + A4249_RS10510 0.41 -0.3
2,114,094 + A4249_RS10510 0.59 -0.6
2,114,095 - A4249_RS10510 0.59 -0.2
2,114,095 - A4249_RS10510 0.59 +0.2
2,114,124 + A4249_RS10510 0.62 +0.7
2,114,125 - A4249_RS10510 0.63 -0.1
2,114,370 + +0.2
2,114,371 - -0.8
2,114,406 + +0.1
2,114,451 + +0.7
2,114,452 - +0.3
2,114,502 + +0.7
2,114,551 + -0.8
2,114,598 + +0.9
2,114,598 + +0.1
2,114,598 + +0.7
2,114,598 + -0.5
2,114,598 + +0.6
2,114,598 + +0.4
2,114,598 + -0.1
2,114,598 + +0.1
2,114,599 - -0.6
2,114,599 - -0.1
2,114,599 - -0.1
2,114,599 - -0.4
2,114,599 - -0.6
2,114,599 - -0.9
2,114,599 - +0.4
2,114,599 - -0.5
2,114,599 - -0.8
2,114,599 - +0.0
2,114,599 - -1.0
2,114,599 - -1.0
2,114,599 - -1.0
2,114,599 - -0.0
2,114,659 + -0.3
2,114,659 + -0.8
2,114,659 + -1.6
2,114,704 + A4249_RS10515 0.10 -1.5
2,114,704 + A4249_RS10515 0.10 +0.4
2,114,704 + A4249_RS10515 0.10 +0.1
2,114,704 + A4249_RS10515 0.10 -1.3
2,114,705 - A4249_RS10515 0.10 +0.6
2,114,705 - A4249_RS10515 0.10 -0.1
2,114,705 - A4249_RS10515 0.10 +0.8
2,114,705 - A4249_RS10515 0.10 +0.2
2,114,705 - A4249_RS10515 0.10 +1.0
2,114,857 + A4249_RS10515 0.25 +0.2
2,114,858 - A4249_RS10515 0.25 -0.6
2,114,958 + A4249_RS10515 0.35 +0.1
2,114,958 + A4249_RS10515 0.35 -1.6
2,114,958 + A4249_RS10515 0.35 -0.9
2,114,958 + A4249_RS10515 0.35 +0.7
2,114,958 + A4249_RS10515 0.35 -0.7
2,114,958 + A4249_RS10515 0.35 -1.0
2,114,958 + A4249_RS10515 0.35 -1.1
2,114,958 + A4249_RS10515 0.35 -1.1
2,114,959 - A4249_RS10515 0.35 -0.6
2,114,959 - A4249_RS10515 0.35 -0.3
2,114,959 - A4249_RS10515 0.35 +1.0
2,114,959 - A4249_RS10515 0.35 -0.6
2,115,163 + A4249_RS10515 0.55 +0.2
2,115,163 + A4249_RS10515 0.55 -0.3
2,115,163 + A4249_RS10515 0.55 -0.9
2,115,163 + A4249_RS10515 0.55 -0.8
2,115,163 + A4249_RS10515 0.55 +1.6
2,115,163 + A4249_RS10515 0.55 +1.4
2,115,164 - A4249_RS10515 0.55 +0.7
2,115,164 - A4249_RS10515 0.55 -0.2
2,115,164 - A4249_RS10515 0.55 -0.3
2,115,164 - A4249_RS10515 0.55 +0.9
2,115,164 - A4249_RS10515 0.55 -0.5
2,115,164 - A4249_RS10515 0.55 +0.4
2,115,164 - A4249_RS10515 0.55 +2.0
2,115,164 - A4249_RS10515 0.55 -0.0
2,115,310 + A4249_RS10515 0.69 -1.4
2,115,311 - A4249_RS10515 0.69 +0.6
2,115,409 + A4249_RS10515 0.78 -0.9
2,115,410 - A4249_RS10515 0.79 -0.5
2,115,410 - A4249_RS10515 0.79 -0.3
2,115,410 - A4249_RS10515 0.79 -1.8
2,115,410 - A4249_RS10515 0.79 -0.8
2,115,410 - A4249_RS10515 0.79 +0.8
2,115,410 - A4249_RS10515 0.79 -0.6
2,115,411 + A4249_RS10515 0.79 +0.1
2,115,412 - A4249_RS10515 0.79 -1.9
2,115,462 + A4249_RS10515 0.84 -1.0
2,115,462 + A4249_RS10515 0.84 +0.8
2,115,462 + A4249_RS10515 0.84 +0.3
2,115,462 + A4249_RS10515 0.84 -0.8
2,115,462 + A4249_RS10515 0.84 +0.5
2,115,462 + A4249_RS10515 0.84 -0.9
2,115,462 + A4249_RS10515 0.84 +0.0
2,115,462 + A4249_RS10515 0.84 +0.4
2,115,462 + A4249_RS10515 0.84 -0.7
2,115,462 + A4249_RS10515 0.84 +0.6
2,115,463 - A4249_RS10515 0.84 +0.1
2,115,463 - A4249_RS10515 0.84 +0.6
2,115,463 - A4249_RS10515 0.84 +0.9
2,115,463 - A4249_RS10515 0.84 +0.4
2,115,463 - A4249_RS10515 0.84 +0.7
2,115,463 - A4249_RS10515 0.84 -0.3
2,115,463 - A4249_RS10515 0.84 +0.7
2,115,463 - A4249_RS10515 0.84 -0.2
2,115,463 - A4249_RS10515 0.84 -1.1
2,115,628 + -1.0
2,115,629 - +0.1
2,115,659 + -0.9
2,115,659 + -0.5
2,115,857 + A4249_RS10520 0.25 +0.2
2,115,857 + A4249_RS10520 0.25 -1.0
2,115,858 - A4249_RS10520 0.25 -0.9
2,115,890 + A4249_RS10520 0.30 +0.7
2,115,890 + A4249_RS10520 0.30 -0.2
2,115,890 + A4249_RS10520 0.30 -0.3
2,115,890 + A4249_RS10520 0.30 +0.2
2,115,890 + A4249_RS10520 0.30 -1.0
2,115,890 + A4249_RS10520 0.30 +0.7
2,115,890 + A4249_RS10520 0.30 +0.0
2,115,890 + A4249_RS10520 0.30 -0.2
2,115,890 + A4249_RS10520 0.30 -0.3
2,115,891 - A4249_RS10520 0.30 -0.3
2,115,891 - A4249_RS10520 0.30 -0.1
2,115,891 - A4249_RS10520 0.30 +1.6
2,115,891 - A4249_RS10520 0.30 -0.0
2,115,891 - A4249_RS10520 0.30 +1.2
2,115,891 - A4249_RS10520 0.30 -0.2
2,115,891 - A4249_RS10520 0.30 +1.0
2,115,891 - A4249_RS10520 0.30 -0.6
2,115,906 - A4249_RS10520 0.32 +0.4
2,115,992 + A4249_RS10520 0.45 -0.3
2,115,992 + A4249_RS10520 0.45 -0.8
2,115,992 + A4249_RS10520 0.45 +0.7
2,115,992 + A4249_RS10520 0.45 +0.7
2,115,993 - A4249_RS10520 0.45 -0.4
2,115,993 - A4249_RS10520 0.45 -1.0
2,115,993 - A4249_RS10520 0.45 +0.3
2,116,136 + A4249_RS10520 0.66 +0.6
2,116,137 - A4249_RS10520 0.67 +1.8
2,116,151 - A4249_RS10520 0.69 -0.5
2,116,255 + A4249_RS10520 0.84 -0.5
2,116,255 + A4249_RS10520 0.84 -0.9
2,116,255 + A4249_RS10520 0.84 -0.2
2,116,255 + A4249_RS10520 0.84 +1.8
2,116,256 - A4249_RS10520 0.84 +0.7
2,116,256 - A4249_RS10520 0.84 +0.5
2,116,256 - A4249_RS10520 0.84 +0.0
2,116,256 - A4249_RS10520 0.84 +0.7
2,116,313 + +0.1
2,116,313 + +1.0
2,116,313 + -1.2
2,116,313 + -0.2
2,116,313 + +0.9
2,116,314 - +0.4
2,116,314 - +0.2
2,116,314 - +0.2
2,116,314 - +0.9
2,116,314 - -0.2
2,116,314 - +0.9
2,116,314 - +1.7
2,116,314 - +0.1
2,116,400 - +0.7
2,116,403 + +1.4
2,116,403 + +0.7

Or see this region's nucleotide sequence