Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10275 and A4249_RS10280 are separated by 84 nucleotides A4249_RS10280 and A4249_RS10285 overlap by 4 nucleotides A4249_RS10285 and A4249_RS10290 are separated by 203 nucleotides
A4249_RS10275: A4249_RS10275 - Lrp/AsnC family transcriptional regulator, at 2,063,556 to 2,064,038
_RS10275
A4249_RS10280: A4249_RS10280 - DMT family transporter, at 2,064,123 to 2,065,031
_RS10280
A4249_RS10285: A4249_RS10285 - methyl-accepting chemotaxis protein, at 2,065,028 to 2,066,521
_RS10285
A4249_RS10290: A4249_RS10290 - flagellar protein export ATPase FliI, at 2,066,725 to 2,068,068
_RS10290
Position (kb)
2065
2066
2067 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2064.040 kb on - strand at 2064.107 kb on - strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.118 kb on - strand at 2064.184 kb on - strand at 2064.204 kb on - strand at 2064.279 kb on + strand, within A4249_RS10280 at 2064.372 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.630 kb on + strand, within A4249_RS10280 at 2064.631 kb on - strand, within A4249_RS10280 at 2064.631 kb on - strand, within A4249_RS10280 at 2064.631 kb on - strand, within A4249_RS10280 at 2064.631 kb on - strand, within A4249_RS10280 at 2064.631 kb on - strand, within A4249_RS10280 at 2064.631 kb on - strand, within A4249_RS10280 at 2064.810 kb on + strand, within A4249_RS10280 at 2064.810 kb on + strand, within A4249_RS10280 at 2064.810 kb on + strand, within A4249_RS10280 at 2064.810 kb on + strand, within A4249_RS10280 at 2065.029 kb on + strand at 2065.030 kb on - strand at 2065.030 kb on - strand at 2065.301 kb on - strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.954 kb on + strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.955 kb on - strand, within A4249_RS10285 at 2065.956 kb on + strand, within A4249_RS10285 at 2065.956 kb on + strand, within A4249_RS10285 at 2065.956 kb on + strand, within A4249_RS10285 at 2065.956 kb on + strand, within A4249_RS10285 at 2065.956 kb on + strand, within A4249_RS10285 at 2065.956 kb on + strand, within A4249_RS10285 at 2065.957 kb on - strand, within A4249_RS10285 at 2065.957 kb on - strand, within A4249_RS10285 at 2065.957 kb on - strand, within A4249_RS10285 at 2065.957 kb on - strand, within A4249_RS10285 at 2065.957 kb on - strand, within A4249_RS10285 at 2066.193 kb on + strand, within A4249_RS10285 at 2066.193 kb on + strand, within A4249_RS10285 at 2066.193 kb on + strand, within A4249_RS10285 at 2066.292 kb on + strand, within A4249_RS10285 at 2066.293 kb on - strand, within A4249_RS10285 at 2066.362 kb on + strand, within A4249_RS10285 at 2066.362 kb on + strand, within A4249_RS10285 at 2066.362 kb on + strand, within A4249_RS10285 at 2066.362 kb on + strand, within A4249_RS10285 at 2066.363 kb on - strand, within A4249_RS10285 at 2066.364 kb on + strand, within A4249_RS10285 at 2066.364 kb on + strand, within A4249_RS10285 at 2066.365 kb on - strand, within A4249_RS10285 at 2066.365 kb on - strand, within A4249_RS10285 at 2066.414 kb on + strand at 2066.509 kb on + strand at 2066.521 kb on + strand at 2066.521 kb on + strand at 2066.521 kb on + strand at 2066.522 kb on - strand at 2066.522 kb on - strand at 2066.522 kb on - strand at 2066.522 kb on - strand at 2066.522 kb on - strand at 2066.522 kb on - strand at 2066.583 kb on + strand at 2066.588 kb on - strand at 2066.632 kb on - strand at 2066.632 kb on - strand at 2067.318 kb on - strand, within A4249_RS10290 at 2067.318 kb on - strand, within A4249_RS10290 at 2067.318 kb on - strand, within A4249_RS10290 at 2067.421 kb on + strand, within A4249_RS10290 at 2067.421 kb on + strand, within A4249_RS10290 at 2067.421 kb on + strand, within A4249_RS10290 at 2067.421 kb on + strand, within A4249_RS10290 at 2067.421 kb on + strand, within A4249_RS10290 at 2067.422 kb on - strand, within A4249_RS10290 at 2067.422 kb on - strand, within A4249_RS10290 at 2067.422 kb on - strand, within A4249_RS10290 at 2067.422 kb on - strand, within A4249_RS10290 at 2067.422 kb on - strand, within A4249_RS10290 at 2067.422 kb on - strand, within A4249_RS10290 at 2067.422 kb on - strand, within A4249_RS10290 at 2067.423 kb on + strand, within A4249_RS10290 at 2067.423 kb on + strand, within A4249_RS10290 at 2067.423 kb on + strand, within A4249_RS10290 at 2067.423 kb on + strand, within A4249_RS10290 at 2067.423 kb on + strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.424 kb on - strand, within A4249_RS10290 at 2067.445 kb on + strand, within A4249_RS10290 at 2067.446 kb on - strand, within A4249_RS10290 at 2067.446 kb on - strand, within A4249_RS10290 at 2067.446 kb on - strand, within A4249_RS10290
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 2,064,040 - +0.6 2,064,107 - -0.3 2,064,111 + +0.3 2,064,111 + +0.8 2,064,111 + -0.6 2,064,111 + -0.6 2,064,111 + -0.3 2,064,112 - -1.1 2,064,112 - -0.6 2,064,112 - +1.8 2,064,112 - +2.8 2,064,112 - +1.2 2,064,118 - +0.0 2,064,184 - +1.6 2,064,204 - +1.9 2,064,279 + A4249_RS10280 0.17 -1.2 2,064,372 + A4249_RS10280 0.27 +0.1 2,064,408 + A4249_RS10280 0.31 -0.9 2,064,408 + A4249_RS10280 0.31 +0.3 2,064,408 + A4249_RS10280 0.31 -0.1 2,064,408 + A4249_RS10280 0.31 -0.9 2,064,409 - A4249_RS10280 0.31 +0.1 2,064,409 - A4249_RS10280 0.31 +0.3 2,064,409 - A4249_RS10280 0.31 -0.2 2,064,409 - A4249_RS10280 0.31 +1.1 2,064,409 - A4249_RS10280 0.31 -0.6 2,064,630 + A4249_RS10280 0.56 -0.1 2,064,630 + A4249_RS10280 0.56 -0.7 2,064,630 + A4249_RS10280 0.56 +0.7 2,064,630 + A4249_RS10280 0.56 +0.3 2,064,630 + A4249_RS10280 0.56 +0.1 2,064,630 + A4249_RS10280 0.56 -0.2 2,064,630 + A4249_RS10280 0.56 -0.7 2,064,630 + A4249_RS10280 0.56 +0.7 2,064,630 + A4249_RS10280 0.56 +1.8 2,064,630 + A4249_RS10280 0.56 +0.7 2,064,631 - A4249_RS10280 0.56 -0.4 2,064,631 - A4249_RS10280 0.56 +0.2 2,064,631 - A4249_RS10280 0.56 +0.5 2,064,631 - A4249_RS10280 0.56 -0.2 2,064,631 - A4249_RS10280 0.56 -0.4 2,064,631 - A4249_RS10280 0.56 -0.1 2,064,810 + A4249_RS10280 0.76 +0.5 2,064,810 + A4249_RS10280 0.76 +0.1 2,064,810 + A4249_RS10280 0.76 -2.1 2,064,810 + A4249_RS10280 0.76 -0.2 2,065,029 + +0.3 2,065,030 - -0.1 2,065,030 - -0.2 2,065,301 - A4249_RS10285 0.18 -1.4 2,065,954 + A4249_RS10285 0.62 +0.4 2,065,954 + A4249_RS10285 0.62 +1.4 2,065,954 + A4249_RS10285 0.62 -0.1 2,065,954 + A4249_RS10285 0.62 +0.1 2,065,954 + A4249_RS10285 0.62 +0.6 2,065,954 + A4249_RS10285 0.62 -0.4 2,065,954 + A4249_RS10285 0.62 +0.9 2,065,954 + A4249_RS10285 0.62 -0.5 2,065,954 + A4249_RS10285 0.62 +0.5 2,065,955 - A4249_RS10285 0.62 -0.2 2,065,955 - A4249_RS10285 0.62 +0.8 2,065,955 - A4249_RS10285 0.62 +0.7 2,065,955 - A4249_RS10285 0.62 -0.6 2,065,955 - A4249_RS10285 0.62 -0.8 2,065,955 - A4249_RS10285 0.62 -0.6 2,065,955 - A4249_RS10285 0.62 -0.1 2,065,955 - A4249_RS10285 0.62 -0.6 2,065,955 - A4249_RS10285 0.62 -0.1 2,065,955 - A4249_RS10285 0.62 -0.5 2,065,955 - A4249_RS10285 0.62 -0.5 2,065,955 - A4249_RS10285 0.62 -0.5 2,065,955 - A4249_RS10285 0.62 -1.3 2,065,955 - A4249_RS10285 0.62 +0.6 2,065,955 - A4249_RS10285 0.62 -0.4 2,065,955 - A4249_RS10285 0.62 +0.2 2,065,956 + A4249_RS10285 0.62 -0.8 2,065,956 + A4249_RS10285 0.62 -0.0 2,065,956 + A4249_RS10285 0.62 +0.1 2,065,956 + A4249_RS10285 0.62 -0.2 2,065,956 + A4249_RS10285 0.62 -0.2 2,065,956 + A4249_RS10285 0.62 -0.2 2,065,957 - A4249_RS10285 0.62 -0.4 2,065,957 - A4249_RS10285 0.62 -0.6 2,065,957 - A4249_RS10285 0.62 +0.2 2,065,957 - A4249_RS10285 0.62 -0.0 2,065,957 - A4249_RS10285 0.62 +0.2 2,066,193 + A4249_RS10285 0.78 +1.4 2,066,193 + A4249_RS10285 0.78 -1.2 2,066,193 + A4249_RS10285 0.78 -0.1 2,066,292 + A4249_RS10285 0.85 -0.9 2,066,293 - A4249_RS10285 0.85 +0.8 2,066,362 + A4249_RS10285 0.89 -0.4 2,066,362 + A4249_RS10285 0.89 +0.9 2,066,362 + A4249_RS10285 0.89 +0.2 2,066,362 + A4249_RS10285 0.89 +2.4 2,066,363 - A4249_RS10285 0.89 +0.7 2,066,364 + A4249_RS10285 0.89 -0.1 2,066,364 + A4249_RS10285 0.89 -0.6 2,066,365 - A4249_RS10285 0.89 -1.0 2,066,365 - A4249_RS10285 0.89 -0.8 2,066,414 + -0.3 2,066,509 + -1.7 2,066,521 + -0.1 2,066,521 + +0.5 2,066,521 + +2.1 2,066,522 - +0.2 2,066,522 - -0.5 2,066,522 - +0.3 2,066,522 - -1.2 2,066,522 - +0.2 2,066,522 - -0.0 2,066,583 + +0.1 2,066,588 - -0.3 2,066,632 - +0.1 2,066,632 - -0.0 2,067,318 - A4249_RS10290 0.44 +0.7 2,067,318 - A4249_RS10290 0.44 +2.3 2,067,318 - A4249_RS10290 0.44 -0.4 2,067,421 + A4249_RS10290 0.52 +1.5 2,067,421 + A4249_RS10290 0.52 -1.4 2,067,421 + A4249_RS10290 0.52 -0.8 2,067,421 + A4249_RS10290 0.52 +1.2 2,067,421 + A4249_RS10290 0.52 -0.7 2,067,422 - A4249_RS10290 0.52 +1.6 2,067,422 - A4249_RS10290 0.52 -0.6 2,067,422 - A4249_RS10290 0.52 +0.4 2,067,422 - A4249_RS10290 0.52 +0.0 2,067,422 - A4249_RS10290 0.52 -0.7 2,067,422 - A4249_RS10290 0.52 +1.1 2,067,422 - A4249_RS10290 0.52 +1.2 2,067,423 + A4249_RS10290 0.52 -0.1 2,067,423 + A4249_RS10290 0.52 -0.2 2,067,423 + A4249_RS10290 0.52 -0.8 2,067,423 + A4249_RS10290 0.52 +1.1 2,067,423 + A4249_RS10290 0.52 +1.1 2,067,424 - A4249_RS10290 0.52 -0.4 2,067,424 - A4249_RS10290 0.52 +0.5 2,067,424 - A4249_RS10290 0.52 +1.1 2,067,424 - A4249_RS10290 0.52 +0.3 2,067,424 - A4249_RS10290 0.52 +0.5 2,067,424 - A4249_RS10290 0.52 +1.1 2,067,424 - A4249_RS10290 0.52 +1.0 2,067,424 - A4249_RS10290 0.52 -0.0 2,067,445 + A4249_RS10290 0.54 -1.9 2,067,446 - A4249_RS10290 0.54 -0.2 2,067,446 - A4249_RS10290 0.54 +0.2 2,067,446 - A4249_RS10290 0.54 +0.8
Or see this region's nucleotide sequence