Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09815

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09810 and A4249_RS09815 are separated by 247 nucleotidesA4249_RS09815 and A4249_RS09820 are separated by 131 nucleotides A4249_RS09810: A4249_RS09810 - family 43 glycosylhydrolase, at 1,953,992 to 1,955,452 _RS09810 A4249_RS09815: A4249_RS09815 - nucleoside transporter C-terminal domain-containing protein, at 1,955,700 to 1,956,974 _RS09815 A4249_RS09820: A4249_RS09820 - branched-chain amino acid aminotransferase, at 1,957,106 to 1,957,984 _RS09820 Position (kb) 1955 1956 1957Strain fitness (log2 ratio) -2 -1 0 1at 1954.719 kb on + strand, within A4249_RS09810at 1954.719 kb on + strand, within A4249_RS09810at 1954.719 kb on + strand, within A4249_RS09810at 1954.719 kb on + strand, within A4249_RS09810at 1954.720 kb on - strand, within A4249_RS09810at 1954.720 kb on - strand, within A4249_RS09810at 1954.872 kb on + strand, within A4249_RS09810at 1954.873 kb on + strand, within A4249_RS09810at 1954.873 kb on + strand, within A4249_RS09810at 1954.873 kb on + strand, within A4249_RS09810at 1954.873 kb on + strand, within A4249_RS09810at 1954.874 kb on - strand, within A4249_RS09810at 1954.874 kb on - strand, within A4249_RS09810at 1954.874 kb on - strand, within A4249_RS09810at 1954.874 kb on - strand, within A4249_RS09810at 1954.874 kb on - strand, within A4249_RS09810at 1954.874 kb on - strand, within A4249_RS09810at 1954.874 kb on - strand, within A4249_RS09810at 1954.920 kb on + strand, within A4249_RS09810at 1954.920 kb on + strand, within A4249_RS09810at 1954.920 kb on + strand, within A4249_RS09810at 1954.920 kb on + strand, within A4249_RS09810at 1954.920 kb on + strand, within A4249_RS09810at 1954.920 kb on + strand, within A4249_RS09810at 1954.920 kb on + strand, within A4249_RS09810at 1954.921 kb on - strand, within A4249_RS09810at 1954.921 kb on - strand, within A4249_RS09810at 1954.921 kb on - strand, within A4249_RS09810at 1954.921 kb on - strand, within A4249_RS09810at 1954.921 kb on - strand, within A4249_RS09810at 1954.921 kb on - strand, within A4249_RS09810at 1954.921 kb on - strand, within A4249_RS09810at 1955.007 kb on + strand, within A4249_RS09810at 1955.007 kb on + strand, within A4249_RS09810at 1955.007 kb on + strand, within A4249_RS09810at 1955.086 kb on - strand, within A4249_RS09810at 1955.174 kb on - strand, within A4249_RS09810at 1955.174 kb on - strand, within A4249_RS09810at 1955.186 kb on + strand, within A4249_RS09810at 1955.186 kb on + strand, within A4249_RS09810at 1955.187 kb on - strand, within A4249_RS09810at 1955.187 kb on - strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.232 kb on + strand, within A4249_RS09810at 1955.233 kb on - strand, within A4249_RS09810at 1955.233 kb on - strand, within A4249_RS09810at 1955.233 kb on - strand, within A4249_RS09810at 1955.233 kb on - strand, within A4249_RS09810at 1955.233 kb on - strand, within A4249_RS09810at 1955.233 kb on - strand, within A4249_RS09810at 1955.233 kb on - strand, within A4249_RS09810at 1955.241 kb on + strand, within A4249_RS09810at 1955.241 kb on + strand, within A4249_RS09810at 1955.241 kb on + strand, within A4249_RS09810at 1955.241 kb on + strand, within A4249_RS09810at 1955.242 kb on - strand, within A4249_RS09810at 1955.242 kb on - strand, within A4249_RS09810at 1955.242 kb on - strand, within A4249_RS09810at 1955.242 kb on - strand, within A4249_RS09810at 1955.243 kb on - strand, within A4249_RS09810at 1955.261 kb on + strand, within A4249_RS09810at 1955.261 kb on + strand, within A4249_RS09810at 1955.262 kb on - strand, within A4249_RS09810at 1955.262 kb on - strand, within A4249_RS09810at 1955.262 kb on - strand, within A4249_RS09810at 1955.384 kb on + strandat 1955.384 kb on + strandat 1955.384 kb on + strandat 1955.384 kb on + strandat 1955.384 kb on + strandat 1955.385 kb on - strandat 1955.385 kb on - strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.388 kb on + strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.389 kb on - strandat 1955.391 kb on + strandat 1955.391 kb on + strandat 1955.391 kb on + strandat 1955.391 kb on + strandat 1955.391 kb on + strandat 1955.391 kb on + strandat 1955.391 kb on + strandat 1955.391 kb on + strandat 1955.392 kb on - strandat 1955.392 kb on - strandat 1955.392 kb on - strandat 1955.392 kb on - strandat 1955.392 kb on - strandat 1955.395 kb on + strandat 1955.395 kb on + strandat 1955.563 kb on + strandat 1955.564 kb on - strandat 1955.564 kb on - strandat 1955.628 kb on + strandat 1955.649 kb on - strandat 1955.864 kb on + strand, within A4249_RS09815at 1955.887 kb on + strand, within A4249_RS09815at 1955.887 kb on + strand, within A4249_RS09815at 1955.888 kb on - strand, within A4249_RS09815at 1955.888 kb on - strand, within A4249_RS09815at 1955.888 kb on - strand, within A4249_RS09815at 1955.888 kb on - strand, within A4249_RS09815at 1956.227 kb on - strand, within A4249_RS09815at 1956.244 kb on + strand, within A4249_RS09815at 1956.244 kb on + strand, within A4249_RS09815at 1956.245 kb on - strand, within A4249_RS09815at 1956.385 kb on + strand, within A4249_RS09815at 1956.385 kb on + strand, within A4249_RS09815at 1956.386 kb on - strand, within A4249_RS09815at 1956.386 kb on - strand, within A4249_RS09815at 1956.469 kb on + strand, within A4249_RS09815at 1956.469 kb on + strand, within A4249_RS09815at 1956.469 kb on + strand, within A4249_RS09815at 1956.469 kb on + strand, within A4249_RS09815at 1956.470 kb on - strand, within A4249_RS09815at 1956.703 kb on + strand, within A4249_RS09815at 1956.703 kb on + strand, within A4249_RS09815at 1956.704 kb on - strand, within A4249_RS09815at 1956.704 kb on - strand, within A4249_RS09815at 1956.704 kb on - strand, within A4249_RS09815at 1956.704 kb on - strand, within A4249_RS09815at 1956.704 kb on - strand, within A4249_RS09815at 1956.704 kb on - strand, within A4249_RS09815at 1956.704 kb on - strand, within A4249_RS09815at 1956.728 kb on - strand, within A4249_RS09815at 1956.728 kb on - strand, within A4249_RS09815at 1956.974 kb on + strandat 1956.974 kb on + strandat 1956.975 kb on - strandat 1956.975 kb on - strandat 1956.975 kb on - strandat 1956.975 kb on - strandat 1957.012 kb on + strandat 1957.013 kb on - strandat 1957.107 kb on + strandat 1957.107 kb on + strandat 1957.107 kb on + strandat 1957.108 kb on - strandat 1957.108 kb on - strandat 1957.108 kb on - strandat 1957.108 kb on - strandat 1957.108 kb on - strandat 1957.108 kb on - strandat 1957.108 kb on - strandat 1957.108 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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1,954,719 + A4249_RS09810 0.50 -1.1
1,954,719 + A4249_RS09810 0.50 -0.1
1,954,719 + A4249_RS09810 0.50 -0.7
1,954,719 + A4249_RS09810 0.50 +0.2
1,954,720 - A4249_RS09810 0.50 -0.5
1,954,720 - A4249_RS09810 0.50 +0.2
1,954,872 + A4249_RS09810 0.60 -1.0
1,954,873 + A4249_RS09810 0.60 -0.5
1,954,873 + A4249_RS09810 0.60 +0.2
1,954,873 + A4249_RS09810 0.60 +0.1
1,954,873 + A4249_RS09810 0.60 -0.2
1,954,874 - A4249_RS09810 0.60 -0.6
1,954,874 - A4249_RS09810 0.60 -0.2
1,954,874 - A4249_RS09810 0.60 +0.4
1,954,874 - A4249_RS09810 0.60 -2.0
1,954,874 - A4249_RS09810 0.60 +0.4
1,954,874 - A4249_RS09810 0.60 +0.4
1,954,874 - A4249_RS09810 0.60 -0.7
1,954,920 + A4249_RS09810 0.64 -0.8
1,954,920 + A4249_RS09810 0.64 -0.1
1,954,920 + A4249_RS09810 0.64 +0.4
1,954,920 + A4249_RS09810 0.64 -0.1
1,954,920 + A4249_RS09810 0.64 -1.2
1,954,920 + A4249_RS09810 0.64 +1.1
1,954,920 + A4249_RS09810 0.64 -0.4
1,954,921 - A4249_RS09810 0.64 -0.1
1,954,921 - A4249_RS09810 0.64 +0.1
1,954,921 - A4249_RS09810 0.64 +0.3
1,954,921 - A4249_RS09810 0.64 -0.1
1,954,921 - A4249_RS09810 0.64 +0.0
1,954,921 - A4249_RS09810 0.64 -0.0
1,954,921 - A4249_RS09810 0.64 -1.3
1,955,007 + A4249_RS09810 0.69 +1.1
1,955,007 + A4249_RS09810 0.69 -1.5
1,955,007 + A4249_RS09810 0.69 -2.1
1,955,086 - A4249_RS09810 0.75 -0.2
1,955,174 - A4249_RS09810 0.81 +0.9
1,955,174 - A4249_RS09810 0.81 +0.7
1,955,186 + A4249_RS09810 0.82 +1.5
1,955,186 + A4249_RS09810 0.82 -2.0
1,955,187 - A4249_RS09810 0.82 +0.6
1,955,187 - A4249_RS09810 0.82 +0.8
1,955,232 + A4249_RS09810 0.85 -0.2
1,955,232 + A4249_RS09810 0.85 -0.3
1,955,232 + A4249_RS09810 0.85 +0.3
1,955,232 + A4249_RS09810 0.85 +1.1
1,955,232 + A4249_RS09810 0.85 +0.6
1,955,232 + A4249_RS09810 0.85 -0.3
1,955,232 + A4249_RS09810 0.85 +0.0
1,955,232 + A4249_RS09810 0.85 -1.0
1,955,232 + A4249_RS09810 0.85 -0.1
1,955,233 - A4249_RS09810 0.85 -0.6
1,955,233 - A4249_RS09810 0.85 -0.1
1,955,233 - A4249_RS09810 0.85 -0.4
1,955,233 - A4249_RS09810 0.85 -0.6
1,955,233 - A4249_RS09810 0.85 +0.5
1,955,233 - A4249_RS09810 0.85 -0.4
1,955,233 - A4249_RS09810 0.85 +0.3
1,955,241 + A4249_RS09810 0.85 +0.0
1,955,241 + A4249_RS09810 0.85 -0.7
1,955,241 + A4249_RS09810 0.85 +0.0
1,955,241 + A4249_RS09810 0.85 +0.2
1,955,242 - A4249_RS09810 0.86 -2.1
1,955,242 - A4249_RS09810 0.86 -0.7
1,955,242 - A4249_RS09810 0.86 +0.6
1,955,242 - A4249_RS09810 0.86 +0.5
1,955,243 - A4249_RS09810 0.86 +1.1
1,955,261 + A4249_RS09810 0.87 -0.2
1,955,261 + A4249_RS09810 0.87 +0.5
1,955,262 - A4249_RS09810 0.87 +1.0
1,955,262 - A4249_RS09810 0.87 +0.1
1,955,262 - A4249_RS09810 0.87 -1.4
1,955,384 + -0.9
1,955,384 + -0.8
1,955,384 + +0.8
1,955,384 + +0.2
1,955,384 + +0.5
1,955,385 - -1.3
1,955,385 - -0.9
1,955,388 + +0.1
1,955,388 + +1.2
1,955,388 + -0.3
1,955,388 + -0.2
1,955,388 + +0.3
1,955,388 + -0.9
1,955,388 + -0.5
1,955,388 + -0.5
1,955,388 + +1.4
1,955,388 + -0.1
1,955,388 + +1.4
1,955,388 + -1.7
1,955,388 + +0.5
1,955,389 - -0.3
1,955,389 - -0.4
1,955,389 - -0.4
1,955,389 - -0.8
1,955,389 - -0.7
1,955,389 - +0.3
1,955,389 - -0.4
1,955,389 - +0.2
1,955,389 - +1.1
1,955,389 - +0.3
1,955,389 - -0.1
1,955,389 - -0.7
1,955,389 - +0.3
1,955,389 - -0.8
1,955,389 - -2.7
1,955,389 - -1.3
1,955,389 - -0.4
1,955,389 - +0.6
1,955,391 + +0.7
1,955,391 + -0.2
1,955,391 + +0.2
1,955,391 + +0.8
1,955,391 + -0.8
1,955,391 + -0.1
1,955,391 + -0.4
1,955,391 + +0.5
1,955,392 - +0.1
1,955,392 - +0.1
1,955,392 - -0.8
1,955,392 - -0.6
1,955,392 - -0.3
1,955,395 + +0.4
1,955,395 + -0.7
1,955,563 + +0.3
1,955,564 - +0.9
1,955,564 - -1.2
1,955,628 + -0.3
1,955,649 - +0.7
1,955,864 + A4249_RS09815 0.13 -1.1
1,955,887 + A4249_RS09815 0.15 -0.2
1,955,887 + A4249_RS09815 0.15 +0.3
1,955,888 - A4249_RS09815 0.15 -0.6
1,955,888 - A4249_RS09815 0.15 -0.5
1,955,888 - A4249_RS09815 0.15 +0.7
1,955,888 - A4249_RS09815 0.15 -0.8
1,956,227 - A4249_RS09815 0.41 -0.2
1,956,244 + A4249_RS09815 0.43 +1.0
1,956,244 + A4249_RS09815 0.43 -2.1
1,956,245 - A4249_RS09815 0.43 -0.0
1,956,385 + A4249_RS09815 0.54 -0.1
1,956,385 + A4249_RS09815 0.54 +1.0
1,956,386 - A4249_RS09815 0.54 -0.0
1,956,386 - A4249_RS09815 0.54 +0.3
1,956,469 + A4249_RS09815 0.60 -0.6
1,956,469 + A4249_RS09815 0.60 -1.0
1,956,469 + A4249_RS09815 0.60 +0.1
1,956,469 + A4249_RS09815 0.60 +1.3
1,956,470 - A4249_RS09815 0.60 +0.8
1,956,703 + A4249_RS09815 0.79 +1.4
1,956,703 + A4249_RS09815 0.79 -0.9
1,956,704 - A4249_RS09815 0.79 +0.2
1,956,704 - A4249_RS09815 0.79 -0.2
1,956,704 - A4249_RS09815 0.79 +0.3
1,956,704 - A4249_RS09815 0.79 -0.3
1,956,704 - A4249_RS09815 0.79 +0.3
1,956,704 - A4249_RS09815 0.79 -0.4
1,956,704 - A4249_RS09815 0.79 +0.6
1,956,728 - A4249_RS09815 0.81 +0.2
1,956,728 - A4249_RS09815 0.81 +0.6
1,956,974 + -0.5
1,956,974 + -0.3
1,956,975 - -0.8
1,956,975 - -0.8
1,956,975 - +0.3
1,956,975 - -0.3
1,957,012 + -0.9
1,957,013 - +0.5
1,957,107 + +0.1
1,957,107 + -0.4
1,957,107 + -0.3
1,957,108 - +0.4
1,957,108 - +0.6
1,957,108 - -0.6
1,957,108 - -1.0
1,957,108 - +0.5
1,957,108 - +0.2
1,957,108 - +0.1
1,957,108 - -0.8

Or see this region's nucleotide sequence