Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09615 and A4249_RS09620 are separated by 180 nucleotides A4249_RS09620 and A4249_RS09625 are separated by 14 nucleotides A4249_RS09625 and A4249_RS09630 are separated by 13 nucleotides A4249_RS09630 and A4249_RS09635 are separated by 12 nucleotides
A4249_RS09615: A4249_RS09615 - flagellar basal body-associated FliL family protein, at 1,918,357 to 1,919,028
_RS09615
A4249_RS09620: A4249_RS09620 - flagellar basal-body rod protein FlgF, at 1,919,209 to 1,919,949
_RS09620
A4249_RS09625: A4249_RS09625 - flagellar basal-body rod protein FlgG, at 1,919,964 to 1,920,752
_RS09625
A4249_RS09630: A4249_RS09630 - flagella basal body P-ring formation protein FlgA, at 1,920,766 to 1,921,371
_RS09630
A4249_RS09635: A4249_RS09635 - flagellar basal body L-ring protein FlgH, at 1,921,384 to 1,922,106
_RS09635
Position (kb)
1919
1920
1921 Strain fitness (log2 ratio)
-2
-1
0
1 at 1919.155 kb on + strand at 1919.155 kb on + strand at 1919.156 kb on - strand at 1919.156 kb on - strand at 1919.224 kb on + strand at 1919.224 kb on + strand at 1919.224 kb on + strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.225 kb on - strand at 1919.227 kb on - strand at 1919.518 kb on + strand, within A4249_RS09620 at 1919.518 kb on + strand, within A4249_RS09620 at 1919.519 kb on - strand, within A4249_RS09620 at 1919.519 kb on - strand, within A4249_RS09620 at 1919.519 kb on - strand, within A4249_RS09620 at 1919.519 kb on - strand, within A4249_RS09620 at 1919.869 kb on + strand, within A4249_RS09620 at 1919.947 kb on + strand at 1919.948 kb on - strand at 1920.097 kb on - strand, within A4249_RS09625 at 1920.097 kb on - strand, within A4249_RS09625 at 1920.097 kb on - strand, within A4249_RS09625 at 1920.195 kb on + strand, within A4249_RS09625 at 1920.240 kb on + strand, within A4249_RS09625 at 1920.267 kb on + strand, within A4249_RS09625 at 1920.267 kb on + strand, within A4249_RS09625 at 1920.267 kb on + strand, within A4249_RS09625 at 1920.267 kb on + strand, within A4249_RS09625 at 1920.267 kb on + strand, within A4249_RS09625 at 1920.268 kb on - strand, within A4249_RS09625 at 1920.268 kb on - strand, within A4249_RS09625 at 1920.268 kb on - strand, within A4249_RS09625 at 1920.268 kb on - strand, within A4249_RS09625 at 1920.268 kb on - strand, within A4249_RS09625 at 1920.303 kb on + strand, within A4249_RS09625 at 1920.303 kb on + strand, within A4249_RS09625 at 1920.303 kb on + strand, within A4249_RS09625 at 1920.304 kb on - strand, within A4249_RS09625 at 1920.304 kb on - strand, within A4249_RS09625 at 1920.304 kb on - strand, within A4249_RS09625 at 1920.304 kb on - strand, within A4249_RS09625 at 1920.364 kb on - strand, within A4249_RS09625 at 1920.615 kb on + strand, within A4249_RS09625 at 1920.615 kb on + strand, within A4249_RS09625 at 1920.616 kb on - strand, within A4249_RS09625 at 1920.616 kb on - strand, within A4249_RS09625 at 1920.682 kb on - strand at 1921.121 kb on - strand, within A4249_RS09630 at 1921.121 kb on - strand, within A4249_RS09630 at 1921.161 kb on + strand, within A4249_RS09630 at 1921.161 kb on + strand, within A4249_RS09630 at 1921.162 kb on - strand, within A4249_RS09630 at 1921.162 kb on - strand, within A4249_RS09630 at 1921.173 kb on + strand, within A4249_RS09630 at 1921.174 kb on - strand, within A4249_RS09630 at 1921.174 kb on - strand, within A4249_RS09630 at 1921.177 kb on + strand, within A4249_RS09630 at 1921.177 kb on + strand, within A4249_RS09630 at 1921.178 kb on - strand, within A4249_RS09630 at 1921.178 kb on - strand, within A4249_RS09630 at 1921.178 kb on - strand, within A4249_RS09630 at 1921.178 kb on - strand, within A4249_RS09630 at 1921.178 kb on - strand, within A4249_RS09630 at 1921.178 kb on - strand, within A4249_RS09630 at 1921.389 kb on + strand at 1921.389 kb on + strand at 1921.389 kb on + strand at 1921.389 kb on + strand at 1921.390 kb on - strand at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.516 kb on + strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.517 kb on - strand, within A4249_RS09635 at 1921.608 kb on + strand, within A4249_RS09635 at 1921.609 kb on - strand, within A4249_RS09635 at 1921.609 kb on - strand, within A4249_RS09635
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,919,155 + +0.2 1,919,155 + -0.4 1,919,156 - +0.1 1,919,156 - +0.3 1,919,224 + +0.2 1,919,224 + -0.6 1,919,224 + +0.9 1,919,225 - -0.6 1,919,225 - +0.3 1,919,225 - -0.8 1,919,225 - +0.1 1,919,225 - -0.5 1,919,225 - +0.7 1,919,225 - +0.6 1,919,225 - -0.2 1,919,225 - -0.7 1,919,225 - +0.1 1,919,227 - -0.4 1,919,518 + A4249_RS09620 0.42 -1.1 1,919,518 + A4249_RS09620 0.42 +0.2 1,919,519 - A4249_RS09620 0.42 +0.2 1,919,519 - A4249_RS09620 0.42 -0.4 1,919,519 - A4249_RS09620 0.42 -0.1 1,919,519 - A4249_RS09620 0.42 +0.2 1,919,869 + A4249_RS09620 0.89 -0.7 1,919,947 + -0.4 1,919,948 - -0.4 1,920,097 - A4249_RS09625 0.17 -0.5 1,920,097 - A4249_RS09625 0.17 +1.0 1,920,097 - A4249_RS09625 0.17 -0.4 1,920,195 + A4249_RS09625 0.29 -0.5 1,920,240 + A4249_RS09625 0.35 -1.6 1,920,267 + A4249_RS09625 0.38 -0.6 1,920,267 + A4249_RS09625 0.38 +0.2 1,920,267 + A4249_RS09625 0.38 -0.0 1,920,267 + A4249_RS09625 0.38 -0.2 1,920,267 + A4249_RS09625 0.38 -0.6 1,920,268 - A4249_RS09625 0.39 -1.8 1,920,268 - A4249_RS09625 0.39 +0.2 1,920,268 - A4249_RS09625 0.39 -0.6 1,920,268 - A4249_RS09625 0.39 +0.7 1,920,268 - A4249_RS09625 0.39 -0.3 1,920,303 + A4249_RS09625 0.43 +0.0 1,920,303 + A4249_RS09625 0.43 -0.4 1,920,303 + A4249_RS09625 0.43 -0.6 1,920,304 - A4249_RS09625 0.43 -1.4 1,920,304 - A4249_RS09625 0.43 -0.4 1,920,304 - A4249_RS09625 0.43 +0.7 1,920,304 - A4249_RS09625 0.43 -1.1 1,920,364 - A4249_RS09625 0.51 +0.4 1,920,615 + A4249_RS09625 0.83 -0.1 1,920,615 + A4249_RS09625 0.83 -0.2 1,920,616 - A4249_RS09625 0.83 -0.8 1,920,616 - A4249_RS09625 0.83 +0.7 1,920,682 - -0.7 1,921,121 - A4249_RS09630 0.59 -0.2 1,921,121 - A4249_RS09630 0.59 -0.3 1,921,161 + A4249_RS09630 0.65 -0.8 1,921,161 + A4249_RS09630 0.65 -1.0 1,921,162 - A4249_RS09630 0.65 -0.1 1,921,162 - A4249_RS09630 0.65 +0.9 1,921,173 + A4249_RS09630 0.67 +0.2 1,921,174 - A4249_RS09630 0.67 +0.4 1,921,174 - A4249_RS09630 0.67 +1.6 1,921,177 + A4249_RS09630 0.68 -0.6 1,921,177 + A4249_RS09630 0.68 -0.3 1,921,178 - A4249_RS09630 0.68 -0.0 1,921,178 - A4249_RS09630 0.68 +0.5 1,921,178 - A4249_RS09630 0.68 -0.5 1,921,178 - A4249_RS09630 0.68 -1.0 1,921,178 - A4249_RS09630 0.68 +0.2 1,921,178 - A4249_RS09630 0.68 -0.3 1,921,389 + -0.7 1,921,389 + +0.4 1,921,389 + -0.2 1,921,389 + -0.8 1,921,390 - -1.1 1,921,516 + A4249_RS09635 0.18 -0.4 1,921,516 + A4249_RS09635 0.18 +0.8 1,921,516 + A4249_RS09635 0.18 -0.0 1,921,516 + A4249_RS09635 0.18 +0.9 1,921,516 + A4249_RS09635 0.18 -0.5 1,921,516 + A4249_RS09635 0.18 -0.4 1,921,517 - A4249_RS09635 0.18 -0.3 1,921,517 - A4249_RS09635 0.18 -0.8 1,921,517 - A4249_RS09635 0.18 -0.9 1,921,517 - A4249_RS09635 0.18 -0.9 1,921,517 - A4249_RS09635 0.18 -0.8 1,921,517 - A4249_RS09635 0.18 +0.4 1,921,608 + A4249_RS09635 0.31 +0.3 1,921,609 - A4249_RS09635 0.31 -0.9 1,921,609 - A4249_RS09635 0.31 +0.1
Or see this region's nucleotide sequence