Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16995 and A4249_RS08960 are separated by 121 nucleotides A4249_RS08960 and A4249_RS08965 are separated by 187 nucleotides A4249_RS08965 and A4249_RS08970 are separated by 37 nucleotides A4249_RS08970 and A4249_RS08975 are separated by 20 nucleotides
A4249_RS16995: A4249_RS16995 - phosphoglycerate dehydrogenase, at 1,792,432 to 1,794,324
_RS16995
A4249_RS08960: A4249_RS08960 - hypothetical protein, at 1,794,446 to 1,794,985
_RS08960
A4249_RS08965: A4249_RS08965 - Hsp33 family molecular chaperone, at 1,795,173 to 1,796,096
_RS08965
A4249_RS08970: A4249_RS08970 - phosphate regulon transcriptional regulator PhoB, at 1,796,134 to 1,796,826
_RS08970
A4249_RS08975: A4249_RS08975 - phosphate signaling complex protein PhoU, at 1,796,847 to 1,797,572
_RS08975
Position (kb)
1795
1796
1797 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1794.396 kb on - strand at 1794.396 kb on - strand at 1794.460 kb on + strand at 1794.461 kb on - strand at 1794.573 kb on + strand, within A4249_RS08960 at 1794.573 kb on + strand, within A4249_RS08960 at 1794.573 kb on + strand, within A4249_RS08960 at 1794.573 kb on + strand, within A4249_RS08960 at 1794.573 kb on + strand, within A4249_RS08960 at 1794.574 kb on - strand, within A4249_RS08960 at 1794.574 kb on - strand, within A4249_RS08960 at 1794.574 kb on - strand, within A4249_RS08960 at 1794.574 kb on - strand, within A4249_RS08960 at 1794.687 kb on + strand, within A4249_RS08960 at 1794.688 kb on - strand, within A4249_RS08960 at 1794.688 kb on - strand, within A4249_RS08960 at 1794.688 kb on - strand, within A4249_RS08960 at 1794.811 kb on + strand, within A4249_RS08960 at 1794.811 kb on + strand, within A4249_RS08960 at 1794.811 kb on + strand, within A4249_RS08960 at 1794.811 kb on + strand, within A4249_RS08960 at 1794.811 kb on + strand, within A4249_RS08960 at 1794.812 kb on - strand, within A4249_RS08960 at 1794.812 kb on - strand, within A4249_RS08960 at 1794.812 kb on - strand, within A4249_RS08960 at 1794.812 kb on - strand, within A4249_RS08960 at 1794.855 kb on + strand, within A4249_RS08960 at 1794.885 kb on + strand, within A4249_RS08960 at 1794.885 kb on + strand, within A4249_RS08960 at 1794.885 kb on + strand, within A4249_RS08960 at 1794.885 kb on + strand, within A4249_RS08960 at 1794.886 kb on - strand, within A4249_RS08960 at 1794.886 kb on - strand, within A4249_RS08960 at 1794.886 kb on - strand, within A4249_RS08960 at 1795.005 kb on + strand at 1795.005 kb on + strand at 1795.005 kb on + strand at 1795.005 kb on + strand at 1795.006 kb on - strand at 1795.006 kb on - strand at 1795.099 kb on + strand at 1795.109 kb on - strand at 1795.130 kb on + strand at 1795.130 kb on + strand at 1795.130 kb on + strand at 1795.130 kb on + strand at 1795.131 kb on - strand at 1795.131 kb on - strand at 1795.131 kb on - strand at 1795.131 kb on - strand at 1795.131 kb on - strand at 1795.134 kb on + strand at 1795.135 kb on - strand at 1795.135 kb on - strand at 1795.135 kb on - strand at 1796.055 kb on + strand at 1796.055 kb on + strand at 1796.055 kb on + strand at 1796.135 kb on + strand at 1796.135 kb on + strand at 1796.135 kb on + strand at 1796.136 kb on - strand at 1796.136 kb on - strand at 1796.136 kb on - strand at 1796.136 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,794,396 - +0.0 1,794,396 - -0.6 1,794,460 + -0.7 1,794,461 - +1.4 1,794,573 + A4249_RS08960 0.24 -0.8 1,794,573 + A4249_RS08960 0.24 -0.1 1,794,573 + A4249_RS08960 0.24 -1.3 1,794,573 + A4249_RS08960 0.24 +0.5 1,794,573 + A4249_RS08960 0.24 +0.2 1,794,574 - A4249_RS08960 0.24 -0.9 1,794,574 - A4249_RS08960 0.24 +0.1 1,794,574 - A4249_RS08960 0.24 -0.8 1,794,574 - A4249_RS08960 0.24 -0.0 1,794,687 + A4249_RS08960 0.45 +1.0 1,794,688 - A4249_RS08960 0.45 -0.4 1,794,688 - A4249_RS08960 0.45 +0.0 1,794,688 - A4249_RS08960 0.45 +0.6 1,794,811 + A4249_RS08960 0.68 -0.6 1,794,811 + A4249_RS08960 0.68 -1.4 1,794,811 + A4249_RS08960 0.68 -0.1 1,794,811 + A4249_RS08960 0.68 +0.4 1,794,811 + A4249_RS08960 0.68 -0.8 1,794,812 - A4249_RS08960 0.68 -0.6 1,794,812 - A4249_RS08960 0.68 +0.5 1,794,812 - A4249_RS08960 0.68 -1.5 1,794,812 - A4249_RS08960 0.68 -1.5 1,794,855 + A4249_RS08960 0.76 -1.6 1,794,885 + A4249_RS08960 0.81 +0.7 1,794,885 + A4249_RS08960 0.81 +0.5 1,794,885 + A4249_RS08960 0.81 -0.1 1,794,885 + A4249_RS08960 0.81 +0.1 1,794,886 - A4249_RS08960 0.81 -0.8 1,794,886 - A4249_RS08960 0.81 -0.1 1,794,886 - A4249_RS08960 0.81 +0.5 1,795,005 + +0.5 1,795,005 + +0.3 1,795,005 + -0.5 1,795,005 + -0.8 1,795,006 - +0.2 1,795,006 - -0.0 1,795,099 + -1.3 1,795,109 - -0.0 1,795,130 + -1.1 1,795,130 + +0.3 1,795,130 + +0.2 1,795,130 + -0.2 1,795,131 - +0.6 1,795,131 - -0.3 1,795,131 - +1.2 1,795,131 - -2.9 1,795,131 - +0.2 1,795,134 + -0.7 1,795,135 - -0.1 1,795,135 - -0.1 1,795,135 - -0.3 1,796,055 + -0.5 1,796,055 + -0.1 1,796,055 + -0.1 1,796,135 + +0.1 1,796,135 + -1.4 1,796,135 + -1.6 1,796,136 - +0.6 1,796,136 - -0.1 1,796,136 - +0.0 1,796,136 - -0.3
Or see this region's nucleotide sequence