Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06460 and A4249_RS17035 are separated by 280 nucleotides A4249_RS17035 and A4249_RS06465 overlap by 4 nucleotides A4249_RS06465 and A4249_RS06470 overlap by 4 nucleotides A4249_RS06470 and A4249_RS06475 are separated by 71 nucleotides A4249_RS06475 and A4249_RS06480 are separated by 194 nucleotides A4249_RS06480 and A4249_RS06485 are separated by 3 nucleotides
A4249_RS06460: A4249_RS06460 - endopeptidase La, at 1,315,432 to 1,317,828
_RS06460
A4249_RS17035: A4249_RS17035 - hypothetical protein, at 1,318,109 to 1,318,237
_RS17035
A4249_RS06465: A4249_RS06465 - hypothetical protein, at 1,318,234 to 1,318,443
_RS06465
A4249_RS06470: A4249_RS06470 - hypothetical protein, at 1,318,440 to 1,318,634
_RS06470
A4249_RS06475: A4249_RS06475 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,318,706 to 1,319,974
_RS06475
A4249_RS06480: A4249_RS06480 - HAD-IB family hydrolase, at 1,320,169 to 1,320,816
_RS06480
A4249_RS06485: A4249_RS06485 - hypothetical protein, at 1,320,820 to 1,321,140
_RS06485
Position (kb)
1318
1319
1320 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1317.835 kb on + strand at 1317.835 kb on + strand at 1317.835 kb on + strand at 1317.836 kb on - strand at 1317.836 kb on - strand at 1317.836 kb on - strand at 1317.836 kb on - strand at 1317.836 kb on - strand at 1317.939 kb on + strand at 1317.939 kb on + strand at 1317.939 kb on + strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1317.940 kb on - strand at 1318.025 kb on + strand at 1318.025 kb on + strand at 1318.026 kb on - strand at 1318.036 kb on + strand at 1318.036 kb on + strand at 1318.037 kb on - strand at 1318.037 kb on - strand at 1318.069 kb on - strand at 1318.288 kb on + strand, within A4249_RS06465 at 1318.288 kb on + strand, within A4249_RS06465 at 1318.288 kb on + strand, within A4249_RS06465 at 1318.288 kb on + strand, within A4249_RS06465 at 1318.289 kb on - strand, within A4249_RS06465 at 1318.444 kb on + strand at 1318.444 kb on + strand at 1318.444 kb on + strand at 1318.733 kb on - strand at 1318.746 kb on + strand at 1318.746 kb on + strand at 1318.747 kb on - strand at 1318.747 kb on - strand at 1319.975 kb on - strand at 1320.183 kb on + strand at 1320.183 kb on + strand at 1320.183 kb on + strand at 1320.197 kb on + strand at 1320.198 kb on - strand at 1320.707 kb on - strand, within A4249_RS06480 at 1320.821 kb on + strand at 1320.821 kb on + strand at 1320.821 kb on + strand at 1320.822 kb on - strand at 1320.822 kb on - strand at 1320.822 kb on - strand at 1320.822 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 1,317,835 + +1.6 1,317,835 + -1.6 1,317,835 + -0.2 1,317,836 - -0.9 1,317,836 - -1.3 1,317,836 - +0.0 1,317,836 - +0.1 1,317,836 - -2.1 1,317,939 + +1.8 1,317,939 + -0.9 1,317,939 + +0.8 1,317,940 - -0.2 1,317,940 - +0.5 1,317,940 - +0.9 1,317,940 - +0.2 1,317,940 - -0.9 1,317,940 - -0.5 1,317,940 - -0.3 1,317,940 - +0.5 1,317,940 - +0.1 1,318,025 + -0.4 1,318,025 + +2.1 1,318,026 - -2.5 1,318,036 + -0.1 1,318,036 + -0.2 1,318,037 - +0.4 1,318,037 - +0.3 1,318,069 - -1.1 1,318,288 + A4249_RS06465 0.26 -1.5 1,318,288 + A4249_RS06465 0.26 +0.8 1,318,288 + A4249_RS06465 0.26 +0.6 1,318,288 + A4249_RS06465 0.26 +0.3 1,318,289 - A4249_RS06465 0.26 +0.2 1,318,444 + -0.5 1,318,444 + +0.6 1,318,444 + -1.4 1,318,733 - -0.0 1,318,746 + +1.8 1,318,746 + +0.7 1,318,747 - +0.2 1,318,747 - +0.9 1,319,975 - +1.8 1,320,183 + +0.2 1,320,183 + -0.5 1,320,183 + -1.8 1,320,197 + -0.3 1,320,198 - +0.0 1,320,707 - A4249_RS06480 0.83 -0.0 1,320,821 + -1.1 1,320,821 + -1.4 1,320,821 + +0.2 1,320,822 - +0.3 1,320,822 - -0.9 1,320,822 - +0.3 1,320,822 - +0.8
Or see this region's nucleotide sequence