Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04375 and A4249_RS04380 overlap by 4 nucleotides A4249_RS04380 and A4249_RS04385 are separated by 3 nucleotides A4249_RS04385 and A4249_RS04390 overlap by 4 nucleotides A4249_RS04390 and A4249_RS04395 are separated by 19 nucleotides
A4249_RS04375: A4249_RS04375 - phytoene desaturase, at 905,740 to 907,221
_RS04375
A4249_RS04380: A4249_RS04380 - phytoene/squalene synthase family protein, at 907,218 to 908,150
_RS04380
A4249_RS04385: A4249_RS04385 - ABC transporter permease, at 908,154 to 909,221
_RS04385
A4249_RS04390: A4249_RS04390 - ABC transporter ATP-binding protein, at 909,218 to 910,105
_RS04390
A4249_RS04395: A4249_RS04395 - polyprenyl synthetase family protein, at 910,125 to 911,021
_RS04395
Position (kb) 908
909
910 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 907.295 kb on - strand at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.332 kb on + strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.333 kb on - strand, within A4249_RS04380 at 907.588 kb on - strand, within A4249_RS04380 at 907.592 kb on + strand, within A4249_RS04380 at 907.614 kb on + strand, within A4249_RS04380 at 907.614 kb on + strand, within A4249_RS04380 at 907.615 kb on - strand, within A4249_RS04380 at 907.615 kb on - strand, within A4249_RS04380 at 907.615 kb on - strand, within A4249_RS04380 at 907.615 kb on - strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.620 kb on + strand, within A4249_RS04380 at 907.621 kb on - strand, within A4249_RS04380 at 907.621 kb on - strand, within A4249_RS04380 at 907.621 kb on - strand, within A4249_RS04380 at 907.621 kb on - strand, within A4249_RS04380 at 907.621 kb on - strand, within A4249_RS04380 at 907.621 kb on - strand, within A4249_RS04380 at 907.621 kb on - strand, within A4249_RS04380 at 907.773 kb on + strand, within A4249_RS04380 at 907.773 kb on + strand, within A4249_RS04380 at 907.773 kb on + strand, within A4249_RS04380 at 907.773 kb on + strand, within A4249_RS04380 at 907.773 kb on + strand, within A4249_RS04380 at 907.774 kb on - strand, within A4249_RS04380 at 907.774 kb on - strand, within A4249_RS04380 at 907.893 kb on + strand, within A4249_RS04380 at 907.893 kb on + strand, within A4249_RS04380 at 907.893 kb on + strand, within A4249_RS04380 at 907.893 kb on + strand, within A4249_RS04380 at 907.893 kb on + strand, within A4249_RS04380 at 907.894 kb on - strand, within A4249_RS04380 at 907.894 kb on - strand, within A4249_RS04380 at 907.894 kb on - strand, within A4249_RS04380 at 907.894 kb on - strand, within A4249_RS04380 at 907.968 kb on + strand, within A4249_RS04380 at 907.969 kb on - strand, within A4249_RS04380 at 907.969 kb on - strand, within A4249_RS04380 at 907.969 kb on - strand, within A4249_RS04380 at 907.969 kb on - strand, within A4249_RS04380 at 908.252 kb on + strand at 908.253 kb on - strand at 908.253 kb on - strand at 908.253 kb on - strand at 908.281 kb on + strand, within A4249_RS04385 at 908.282 kb on - strand, within A4249_RS04385 at 908.282 kb on - strand, within A4249_RS04385 at 908.282 kb on - strand, within A4249_RS04385 at 908.737 kb on + strand, within A4249_RS04385 at 908.737 kb on + strand, within A4249_RS04385 at 908.737 kb on + strand, within A4249_RS04385 at 908.738 kb on - strand, within A4249_RS04385 at 908.738 kb on - strand, within A4249_RS04385 at 908.738 kb on - strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.740 kb on + strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.741 kb on - strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.931 kb on + strand, within A4249_RS04385 at 908.932 kb on - strand, within A4249_RS04385 at 908.932 kb on - strand, within A4249_RS04385 at 908.932 kb on - strand, within A4249_RS04385 at 908.932 kb on - strand, within A4249_RS04385 at 908.932 kb on - strand, within A4249_RS04385 at 909.009 kb on + strand, within A4249_RS04385 at 909.009 kb on + strand, within A4249_RS04385 at 909.009 kb on + strand, within A4249_RS04385 at 909.009 kb on + strand, within A4249_RS04385 at 909.009 kb on + strand, within A4249_RS04385 at 909.009 kb on + strand, within A4249_RS04385 at 909.009 kb on + strand, within A4249_RS04385 at 909.010 kb on - strand, within A4249_RS04385 at 909.010 kb on - strand, within A4249_RS04385 at 909.010 kb on - strand, within A4249_RS04385 at 909.133 kb on + strand at 909.133 kb on + strand at 909.133 kb on + strand at 909.133 kb on + strand at 909.133 kb on + strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.134 kb on - strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.153 kb on + strand at 909.154 kb on - strand at 909.154 kb on - strand at 909.154 kb on - strand at 909.614 kb on + strand, within A4249_RS04390 at 909.615 kb on - strand, within A4249_RS04390 at 909.831 kb on - strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.938 kb on + strand, within A4249_RS04390 at 909.939 kb on - strand, within A4249_RS04390 at 909.939 kb on - strand, within A4249_RS04390 at 909.939 kb on - strand, within A4249_RS04390 at 910.026 kb on + strand at 910.026 kb on + strand at 910.026 kb on + strand at 910.026 kb on + strand at 910.026 kb on + strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.027 kb on - strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.165 kb on + strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand at 910.166 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 907,295 - +0.9 907,332 + A4249_RS04380 0.12 -0.0 907,332 + A4249_RS04380 0.12 +0.3 907,332 + A4249_RS04380 0.12 -0.5 907,332 + A4249_RS04380 0.12 -0.1 907,332 + A4249_RS04380 0.12 +0.5 907,332 + A4249_RS04380 0.12 +0.1 907,332 + A4249_RS04380 0.12 +0.6 907,332 + A4249_RS04380 0.12 +0.8 907,332 + A4249_RS04380 0.12 -0.6 907,332 + A4249_RS04380 0.12 +0.7 907,332 + A4249_RS04380 0.12 +0.2 907,333 - A4249_RS04380 0.12 -0.6 907,333 - A4249_RS04380 0.12 +0.3 907,333 - A4249_RS04380 0.12 -0.4 907,333 - A4249_RS04380 0.12 +1.2 907,333 - A4249_RS04380 0.12 -0.9 907,333 - A4249_RS04380 0.12 +0.7 907,333 - A4249_RS04380 0.12 +1.0 907,333 - A4249_RS04380 0.12 -0.6 907,333 - A4249_RS04380 0.12 +0.3 907,333 - A4249_RS04380 0.12 -2.4 907,588 - A4249_RS04380 0.40 -0.1 907,592 + A4249_RS04380 0.40 -0.2 907,614 + A4249_RS04380 0.42 -0.2 907,614 + A4249_RS04380 0.42 +1.2 907,615 - A4249_RS04380 0.43 +0.3 907,615 - A4249_RS04380 0.43 +0.1 907,615 - A4249_RS04380 0.43 -0.2 907,615 - A4249_RS04380 0.43 -0.4 907,620 + A4249_RS04380 0.43 +1.0 907,620 + A4249_RS04380 0.43 +0.8 907,620 + A4249_RS04380 0.43 +0.6 907,620 + A4249_RS04380 0.43 -1.2 907,620 + A4249_RS04380 0.43 -0.6 907,620 + A4249_RS04380 0.43 +0.8 907,620 + A4249_RS04380 0.43 -0.1 907,620 + A4249_RS04380 0.43 +0.4 907,621 - A4249_RS04380 0.43 +1.0 907,621 - A4249_RS04380 0.43 -0.5 907,621 - A4249_RS04380 0.43 -0.1 907,621 - A4249_RS04380 0.43 -0.5 907,621 - A4249_RS04380 0.43 +0.7 907,621 - A4249_RS04380 0.43 -0.7 907,621 - A4249_RS04380 0.43 -0.2 907,773 + A4249_RS04380 0.59 +0.3 907,773 + A4249_RS04380 0.59 -0.7 907,773 + A4249_RS04380 0.59 -0.7 907,773 + A4249_RS04380 0.59 -0.6 907,773 + A4249_RS04380 0.59 -0.5 907,774 - A4249_RS04380 0.60 -0.1 907,774 - A4249_RS04380 0.60 +0.1 907,893 + A4249_RS04380 0.72 -0.3 907,893 + A4249_RS04380 0.72 +0.4 907,893 + A4249_RS04380 0.72 -0.4 907,893 + A4249_RS04380 0.72 -0.7 907,893 + A4249_RS04380 0.72 -0.6 907,894 - A4249_RS04380 0.72 -0.8 907,894 - A4249_RS04380 0.72 -0.0 907,894 - A4249_RS04380 0.72 -0.6 907,894 - A4249_RS04380 0.72 +0.1 907,968 + A4249_RS04380 0.80 -0.4 907,969 - A4249_RS04380 0.80 +0.2 907,969 - A4249_RS04380 0.80 +0.6 907,969 - A4249_RS04380 0.80 -0.4 907,969 - A4249_RS04380 0.80 +3.0 908,252 + -0.6 908,253 - +1.2 908,253 - -0.6 908,253 - -1.7 908,281 + A4249_RS04385 0.12 -0.7 908,282 - A4249_RS04385 0.12 +1.1 908,282 - A4249_RS04385 0.12 +0.9 908,282 - A4249_RS04385 0.12 -0.6 908,737 + A4249_RS04385 0.55 -0.4 908,737 + A4249_RS04385 0.55 -1.2 908,737 + A4249_RS04385 0.55 -0.4 908,738 - A4249_RS04385 0.55 -1.2 908,738 - A4249_RS04385 0.55 +0.5 908,738 - A4249_RS04385 0.55 +1.3 908,740 + A4249_RS04385 0.55 +0.6 908,740 + A4249_RS04385 0.55 +0.3 908,740 + A4249_RS04385 0.55 +0.0 908,740 + A4249_RS04385 0.55 -0.8 908,740 + A4249_RS04385 0.55 -0.1 908,740 + A4249_RS04385 0.55 -0.1 908,740 + A4249_RS04385 0.55 -0.9 908,740 + A4249_RS04385 0.55 -2.3 908,740 + A4249_RS04385 0.55 +0.9 908,740 + A4249_RS04385 0.55 -0.7 908,740 + A4249_RS04385 0.55 +0.1 908,740 + A4249_RS04385 0.55 -0.3 908,740 + A4249_RS04385 0.55 -1.2 908,740 + A4249_RS04385 0.55 +0.8 908,741 - A4249_RS04385 0.55 -1.1 908,741 - A4249_RS04385 0.55 -0.0 908,741 - A4249_RS04385 0.55 -1.4 908,741 - A4249_RS04385 0.55 -1.8 908,741 - A4249_RS04385 0.55 +0.1 908,741 - A4249_RS04385 0.55 -0.2 908,741 - A4249_RS04385 0.55 -1.2 908,741 - A4249_RS04385 0.55 +0.5 908,741 - A4249_RS04385 0.55 +0.7 908,741 - A4249_RS04385 0.55 +0.1 908,741 - A4249_RS04385 0.55 -0.0 908,741 - A4249_RS04385 0.55 -0.1 908,741 - A4249_RS04385 0.55 -0.4 908,741 - A4249_RS04385 0.55 +0.5 908,931 + A4249_RS04385 0.73 +0.8 908,931 + A4249_RS04385 0.73 +0.6 908,931 + A4249_RS04385 0.73 -0.7 908,931 + A4249_RS04385 0.73 +0.1 908,931 + A4249_RS04385 0.73 -0.5 908,931 + A4249_RS04385 0.73 +1.2 908,931 + A4249_RS04385 0.73 +0.2 908,931 + A4249_RS04385 0.73 -0.2 908,932 - A4249_RS04385 0.73 +0.9 908,932 - A4249_RS04385 0.73 +1.2 908,932 - A4249_RS04385 0.73 +0.2 908,932 - A4249_RS04385 0.73 +0.2 908,932 - A4249_RS04385 0.73 -0.6 909,009 + A4249_RS04385 0.80 -0.8 909,009 + A4249_RS04385 0.80 +0.4 909,009 + A4249_RS04385 0.80 +0.7 909,009 + A4249_RS04385 0.80 +1.3 909,009 + A4249_RS04385 0.80 +1.1 909,009 + A4249_RS04385 0.80 +0.6 909,009 + A4249_RS04385 0.80 +0.3 909,010 - A4249_RS04385 0.80 +0.5 909,010 - A4249_RS04385 0.80 -0.2 909,010 - A4249_RS04385 0.80 -0.6 909,133 + -1.9 909,133 + +0.2 909,133 + +0.4 909,133 + -0.3 909,133 + +1.8 909,134 - -0.2 909,134 - -0.7 909,134 - +0.3 909,134 - -0.3 909,134 - +0.6 909,134 - +1.3 909,153 + +0.1 909,153 + +0.4 909,153 + +0.8 909,153 + +0.9 909,153 + +0.1 909,154 - +0.2 909,154 - +0.0 909,154 - -0.2 909,614 + A4249_RS04390 0.45 -0.7 909,615 - A4249_RS04390 0.45 -0.5 909,831 - A4249_RS04390 0.69 +0.6 909,938 + A4249_RS04390 0.81 +0.2 909,938 + A4249_RS04390 0.81 -1.0 909,938 + A4249_RS04390 0.81 -0.6 909,938 + A4249_RS04390 0.81 -0.1 909,938 + A4249_RS04390 0.81 +1.4 909,938 + A4249_RS04390 0.81 +0.4 909,939 - A4249_RS04390 0.81 -0.9 909,939 - A4249_RS04390 0.81 +1.4 909,939 - A4249_RS04390 0.81 -0.6 910,026 + +0.8 910,026 + +0.4 910,026 + +0.6 910,026 + +0.6 910,026 + -0.2 910,027 - -0.3 910,027 - -0.1 910,027 - +0.3 910,027 - -0.1 910,027 - -0.4 910,027 - -0.3 910,027 - -0.9 910,027 - +0.4 910,165 + +0.3 910,165 + -0.1 910,165 + +0.4 910,165 + -0.0 910,165 + -0.9 910,165 + +0.5 910,166 - -1.2 910,166 - -0.1 910,166 - +0.6 910,166 - +0.2 910,166 - +1.8 910,166 - -0.2 910,166 - +0.8 910,166 - -0.5 910,166 - -0.4
Or see this region's nucleotide sequence