Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS04090

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04085 and A4249_RS04090 are separated by 508 nucleotidesA4249_RS04090 and A4249_RS04095 are separated by 39 nucleotidesA4249_RS04095 and A4249_RS04100 are separated by 4 nucleotides A4249_RS04085: A4249_RS04085 - ribonuclease E/G, at 847,369 to 850,071 _RS04085 A4249_RS04090: A4249_RS04090 - N-acetylmuramoyl-L-alanine amidase, at 850,580 to 851,755 _RS04090 A4249_RS04095: A4249_RS04095 - SDR family oxidoreductase, at 851,795 to 852,472 _RS04095 A4249_RS04100: A4249_RS04100 - J domain-containing protein, at 852,477 to 853,145 _RS04100 Position (kb) 850 851 852Strain fitness (log2 ratio) -2 -1 0 1at 850.239 kb on - strandat 850.239 kb on - strandat 850.239 kb on - strandat 850.332 kb on - strandat 850.332 kb on - strandat 850.332 kb on - strandat 850.332 kb on - strandat 850.422 kb on - strandat 850.422 kb on - strandat 850.422 kb on - strandat 850.422 kb on - strandat 850.442 kb on - strandat 850.469 kb on + strandat 850.469 kb on + strandat 850.470 kb on - strandat 850.470 kb on - strandat 850.498 kb on + strandat 850.498 kb on + strandat 850.498 kb on + strandat 850.498 kb on + strandat 850.498 kb on + strandat 850.499 kb on - strandat 850.499 kb on - strandat 850.499 kb on - strandat 850.499 kb on - strandat 850.504 kb on + strandat 850.505 kb on - strandat 850.505 kb on - strandat 850.505 kb on - strandat 850.505 kb on - strandat 850.838 kb on + strand, within A4249_RS04090at 850.838 kb on + strand, within A4249_RS04090at 850.838 kb on + strand, within A4249_RS04090at 850.838 kb on + strand, within A4249_RS04090at 850.838 kb on + strand, within A4249_RS04090at 850.839 kb on - strand, within A4249_RS04090at 850.839 kb on - strand, within A4249_RS04090at 850.839 kb on - strand, within A4249_RS04090at 850.839 kb on - strand, within A4249_RS04090at 850.839 kb on - strand, within A4249_RS04090at 850.946 kb on + strand, within A4249_RS04090at 850.952 kb on + strand, within A4249_RS04090at 850.952 kb on + strand, within A4249_RS04090at 850.952 kb on + strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 850.953 kb on - strand, within A4249_RS04090at 851.207 kb on + strand, within A4249_RS04090at 851.207 kb on + strand, within A4249_RS04090at 851.207 kb on + strand, within A4249_RS04090at 851.220 kb on - strand, within A4249_RS04090at 851.318 kb on + strand, within A4249_RS04090at 851.318 kb on + strand, within A4249_RS04090at 851.318 kb on + strand, within A4249_RS04090at 851.318 kb on + strand, within A4249_RS04090at 851.318 kb on + strand, within A4249_RS04090at 851.318 kb on + strand, within A4249_RS04090at 851.319 kb on - strand, within A4249_RS04090at 851.319 kb on - strand, within A4249_RS04090at 851.319 kb on - strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.320 kb on + strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.321 kb on - strand, within A4249_RS04090at 851.491 kb on - strand, within A4249_RS04090at 851.690 kb on + strandat 851.691 kb on - strandat 851.848 kb on + strandat 851.849 kb on - strandat 851.849 kb on - strandat 851.920 kb on + strand, within A4249_RS04095at 851.920 kb on + strand, within A4249_RS04095at 851.920 kb on + strand, within A4249_RS04095at 851.921 kb on - strand, within A4249_RS04095at 852.200 kb on + strand, within A4249_RS04095at 852.200 kb on + strand, within A4249_RS04095at 852.200 kb on + strand, within A4249_RS04095at 852.200 kb on + strand, within A4249_RS04095at 852.201 kb on - strand, within A4249_RS04095at 852.201 kb on - strand, within A4249_RS04095at 852.201 kb on - strand, within A4249_RS04095at 852.201 kb on - strand, within A4249_RS04095at 852.201 kb on - strand, within A4249_RS04095at 852.201 kb on - strand, within A4249_RS04095at 852.389 kb on + strand, within A4249_RS04095at 852.389 kb on + strand, within A4249_RS04095at 852.389 kb on + strand, within A4249_RS04095at 852.390 kb on - strand, within A4249_RS04095at 852.390 kb on - strand, within A4249_RS04095at 852.390 kb on - strand, within A4249_RS04095at 852.390 kb on - strand, within A4249_RS04095at 852.461 kb on + strandat 852.461 kb on + strandat 852.462 kb on - strandat 852.462 kb on - strandat 852.462 kb on - strandat 852.471 kb on - strandat 852.471 kb on - strandat 852.471 kb on - strandat 852.595 kb on + strand, within A4249_RS04100at 852.596 kb on - strand, within A4249_RS04100at 852.596 kb on - strand, within A4249_RS04100at 852.596 kb on - strand, within A4249_RS04100

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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850,239 - -0.2
850,239 - +0.2
850,239 - -0.3
850,332 - -0.4
850,332 - -1.3
850,332 - +0.6
850,332 - +1.1
850,422 - -1.8
850,422 - -0.6
850,422 - +0.9
850,422 - -0.2
850,442 - -1.5
850,469 + -1.4
850,469 + +1.6
850,470 - -0.6
850,470 - +0.5
850,498 + -1.1
850,498 + -0.1
850,498 + -0.7
850,498 + -0.5
850,498 + -1.2
850,499 - -0.9
850,499 - +0.6
850,499 - -0.0
850,499 - -0.1
850,504 + +1.0
850,505 - -0.1
850,505 - -0.7
850,505 - -0.2
850,505 - +0.6
850,838 + A4249_RS04090 0.22 -0.8
850,838 + A4249_RS04090 0.22 -0.2
850,838 + A4249_RS04090 0.22 +0.2
850,838 + A4249_RS04090 0.22 -0.4
850,838 + A4249_RS04090 0.22 -0.8
850,839 - A4249_RS04090 0.22 +0.1
850,839 - A4249_RS04090 0.22 -0.1
850,839 - A4249_RS04090 0.22 -0.1
850,839 - A4249_RS04090 0.22 -0.4
850,839 - A4249_RS04090 0.22 -0.4
850,946 + A4249_RS04090 0.31 -0.3
850,952 + A4249_RS04090 0.32 -0.3
850,952 + A4249_RS04090 0.32 +0.1
850,952 + A4249_RS04090 0.32 -1.4
850,953 - A4249_RS04090 0.32 -0.4
850,953 - A4249_RS04090 0.32 -0.1
850,953 - A4249_RS04090 0.32 -1.5
850,953 - A4249_RS04090 0.32 +0.0
850,953 - A4249_RS04090 0.32 +0.4
850,953 - A4249_RS04090 0.32 +0.4
850,953 - A4249_RS04090 0.32 -0.1
850,953 - A4249_RS04090 0.32 -0.2
850,953 - A4249_RS04090 0.32 -0.5
850,953 - A4249_RS04090 0.32 +0.1
850,953 - A4249_RS04090 0.32 +0.2
850,953 - A4249_RS04090 0.32 -0.1
851,207 + A4249_RS04090 0.53 -0.5
851,207 + A4249_RS04090 0.53 -0.4
851,207 + A4249_RS04090 0.53 -0.2
851,220 - A4249_RS04090 0.54 +0.2
851,318 + A4249_RS04090 0.63 -0.2
851,318 + A4249_RS04090 0.63 -0.4
851,318 + A4249_RS04090 0.63 -0.6
851,318 + A4249_RS04090 0.63 +0.0
851,318 + A4249_RS04090 0.63 -0.5
851,318 + A4249_RS04090 0.63 +0.3
851,319 - A4249_RS04090 0.63 +0.1
851,319 - A4249_RS04090 0.63 +0.2
851,319 - A4249_RS04090 0.63 -0.2
851,320 + A4249_RS04090 0.63 -0.1
851,320 + A4249_RS04090 0.63 -0.0
851,320 + A4249_RS04090 0.63 +1.5
851,320 + A4249_RS04090 0.63 -0.6
851,320 + A4249_RS04090 0.63 -0.6
851,320 + A4249_RS04090 0.63 -0.2
851,320 + A4249_RS04090 0.63 -0.6
851,320 + A4249_RS04090 0.63 -0.9
851,320 + A4249_RS04090 0.63 +0.4
851,320 + A4249_RS04090 0.63 -0.3
851,320 + A4249_RS04090 0.63 +0.2
851,320 + A4249_RS04090 0.63 -0.0
851,320 + A4249_RS04090 0.63 -0.0
851,321 - A4249_RS04090 0.63 +0.6
851,321 - A4249_RS04090 0.63 +0.4
851,321 - A4249_RS04090 0.63 +0.2
851,321 - A4249_RS04090 0.63 -0.6
851,321 - A4249_RS04090 0.63 +0.5
851,321 - A4249_RS04090 0.63 +0.3
851,321 - A4249_RS04090 0.63 -0.0
851,321 - A4249_RS04090 0.63 -0.1
851,321 - A4249_RS04090 0.63 -0.9
851,321 - A4249_RS04090 0.63 +0.0
851,321 - A4249_RS04090 0.63 -0.7
851,491 - A4249_RS04090 0.77 -0.4
851,690 + -0.8
851,691 - -1.5
851,848 + -0.0
851,849 - -0.9
851,849 - -0.8
851,920 + A4249_RS04095 0.18 -0.1
851,920 + A4249_RS04095 0.18 +0.1
851,920 + A4249_RS04095 0.18 +0.0
851,921 - A4249_RS04095 0.19 -0.2
852,200 + A4249_RS04095 0.60 -1.0
852,200 + A4249_RS04095 0.60 -0.4
852,200 + A4249_RS04095 0.60 -0.0
852,200 + A4249_RS04095 0.60 +0.5
852,201 - A4249_RS04095 0.60 -0.4
852,201 - A4249_RS04095 0.60 -0.2
852,201 - A4249_RS04095 0.60 -0.3
852,201 - A4249_RS04095 0.60 -0.3
852,201 - A4249_RS04095 0.60 -0.3
852,201 - A4249_RS04095 0.60 -0.1
852,389 + A4249_RS04095 0.88 -0.4
852,389 + A4249_RS04095 0.88 -2.0
852,389 + A4249_RS04095 0.88 -1.6
852,390 - A4249_RS04095 0.88 -0.3
852,390 - A4249_RS04095 0.88 -0.3
852,390 - A4249_RS04095 0.88 -0.3
852,390 - A4249_RS04095 0.88 -0.8
852,461 + -1.0
852,461 + -0.1
852,462 - -0.3
852,462 - +0.1
852,462 - -0.4
852,471 - +0.1
852,471 - -0.5
852,471 - +0.4
852,595 + A4249_RS04100 0.18 -0.3
852,596 - A4249_RS04100 0.18 +0.2
852,596 - A4249_RS04100 0.18 +0.6
852,596 - A4249_RS04100 0.18 +0.2

Or see this region's nucleotide sequence