Experiment: Guanosine 0.35306 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01765 and A4249_RS01770 are separated by 134 nucleotides A4249_RS01770 and A4249_RS01775 are separated by 80 nucleotides A4249_RS01775 and A4249_RS01780 are separated by 197 nucleotides A4249_RS01780 and A4249_RS01785 overlap by 4 nucleotides A4249_RS01785 and A4249_RS01790 overlap by 4 nucleotides
A4249_RS01765: A4249_RS01765 - DUF3489 domain-containing protein, at 337,373 to 337,813
_RS01765
A4249_RS01770: A4249_RS01770 - hypothetical protein, at 337,948 to 338,130
_RS01770
A4249_RS01775: A4249_RS01775 - helix-turn-helix transcriptional regulator, at 338,211 to 338,417
_RS01775
A4249_RS01780: A4249_RS01780 - hypothetical protein, at 338,615 to 339,415
_RS01780
A4249_RS01785: A4249_RS01785 - DUF5681 domain-containing protein, at 339,412 to 339,912
_RS01785
A4249_RS01790: A4249_RS01790 - site-specific DNA-methyltransferase, at 339,909 to 341,258
_RS01790
Position (kb) 338
339
340 Strain fitness (log2 ratio) -2
-1
0
1
2 at 337.685 kb on + strand, within A4249_RS01765 at 337.685 kb on + strand, within A4249_RS01765 at 337.686 kb on - strand, within A4249_RS01765 at 337.686 kb on - strand, within A4249_RS01765 at 337.686 kb on - strand, within A4249_RS01765 at 337.802 kb on + strand at 337.802 kb on + strand at 337.802 kb on + strand at 337.802 kb on + strand at 337.802 kb on + strand at 337.802 kb on + strand at 337.803 kb on - strand at 337.803 kb on - strand at 337.803 kb on - strand at 337.803 kb on - strand at 337.803 kb on - strand at 337.803 kb on - strand at 337.949 kb on + strand at 337.949 kb on + strand at 337.968 kb on + strand, within A4249_RS01770 at 337.968 kb on + strand, within A4249_RS01770 at 337.968 kb on + strand, within A4249_RS01770 at 337.969 kb on - strand, within A4249_RS01770 at 337.969 kb on - strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.086 kb on + strand, within A4249_RS01770 at 338.087 kb on - strand, within A4249_RS01770 at 338.087 kb on - strand, within A4249_RS01770 at 338.087 kb on - strand, within A4249_RS01770 at 338.087 kb on - strand, within A4249_RS01770 at 338.087 kb on - strand, within A4249_RS01770 at 338.087 kb on - strand, within A4249_RS01770 at 338.087 kb on - strand, within A4249_RS01770 at 338.150 kb on + strand at 338.150 kb on + strand at 338.150 kb on + strand at 338.150 kb on + strand at 338.150 kb on + strand at 338.150 kb on + strand at 338.150 kb on + strand at 338.151 kb on - strand at 338.151 kb on - strand at 338.151 kb on - strand at 338.151 kb on - strand at 338.151 kb on - strand at 338.151 kb on - strand at 338.151 kb on - strand at 338.199 kb on + strand at 338.199 kb on + strand at 338.199 kb on + strand at 338.199 kb on + strand at 338.199 kb on + strand at 338.199 kb on + strand at 338.199 kb on + strand at 338.200 kb on - strand at 338.200 kb on - strand at 338.200 kb on - strand at 338.200 kb on - strand at 338.212 kb on + strand at 338.212 kb on + strand at 338.213 kb on - strand at 338.213 kb on - strand at 338.213 kb on - strand at 338.453 kb on + strand at 338.453 kb on + strand at 338.453 kb on + strand at 338.453 kb on + strand at 338.453 kb on + strand at 338.453 kb on + strand at 338.454 kb on - strand at 338.454 kb on - strand at 338.454 kb on - strand at 338.454 kb on - strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.460 kb on + strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.461 kb on - strand at 338.524 kb on + strand at 338.524 kb on + strand at 338.525 kb on - strand at 338.525 kb on - strand at 338.525 kb on - strand at 338.525 kb on - strand at 338.525 kb on - strand at 338.525 kb on - strand at 338.525 kb on - strand at 338.525 kb on - strand at 338.827 kb on - strand, within A4249_RS01780 at 338.928 kb on + strand, within A4249_RS01780 at 338.929 kb on - strand, within A4249_RS01780 at 338.929 kb on - strand, within A4249_RS01780 at 338.929 kb on - strand, within A4249_RS01780 at 338.929 kb on - strand, within A4249_RS01780 at 339.192 kb on - strand, within A4249_RS01780 at 339.192 kb on - strand, within A4249_RS01780 at 339.192 kb on - strand, within A4249_RS01780 at 339.292 kb on - strand, within A4249_RS01780 at 339.292 kb on - strand, within A4249_RS01780 at 339.292 kb on - strand, within A4249_RS01780 at 339.292 kb on - strand, within A4249_RS01780 at 339.292 kb on - strand, within A4249_RS01780 at 339.292 kb on - strand, within A4249_RS01780 at 339.292 kb on - strand, within A4249_RS01780 at 339.397 kb on + strand at 339.398 kb on - strand at 339.398 kb on - strand at 339.398 kb on - strand at 339.413 kb on + strand at 339.414 kb on - strand at 339.420 kb on + strand at 339.420 kb on + strand at 339.420 kb on + strand at 339.421 kb on - strand at 339.421 kb on - strand at 339.421 kb on - strand at 339.582 kb on + strand, within A4249_RS01785 at 339.582 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.586 kb on + strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.587 kb on - strand, within A4249_RS01785 at 339.700 kb on + strand, within A4249_RS01785 at 339.898 kb on - strand at 339.898 kb on - strand at 340.060 kb on + strand, within A4249_RS01790 at 340.060 kb on + strand, within A4249_RS01790 at 340.060 kb on + strand, within A4249_RS01790 at 340.060 kb on + strand, within A4249_RS01790 at 340.061 kb on - strand, within A4249_RS01790 at 340.061 kb on - strand, within A4249_RS01790 at 340.072 kb on + strand, within A4249_RS01790 at 340.072 kb on + strand, within A4249_RS01790 at 340.073 kb on - strand, within A4249_RS01790 at 340.274 kb on + strand, within A4249_RS01790 at 340.274 kb on + strand, within A4249_RS01790 at 340.274 kb on + strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.321 kb on + strand, within A4249_RS01790 at 340.321 kb on + strand, within A4249_RS01790 at 340.321 kb on + strand, within A4249_RS01790 at 340.322 kb on - strand, within A4249_RS01790 at 340.322 kb on - strand, within A4249_RS01790 at 340.322 kb on - strand, within A4249_RS01790 at 340.372 kb on + strand, within A4249_RS01790 at 340.372 kb on + strand, within A4249_RS01790 at 340.372 kb on + strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790
Per-strain Table
Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C) remove 337,685 + A4249_RS01765 0.71 -0.2 337,685 + A4249_RS01765 0.71 -0.4 337,686 - A4249_RS01765 0.71 -0.4 337,686 - A4249_RS01765 0.71 +2.1 337,686 - A4249_RS01765 0.71 -1.0 337,802 + +0.5 337,802 + -0.2 337,802 + -0.5 337,802 + +0.2 337,802 + -0.1 337,802 + +0.3 337,803 - +1.2 337,803 - -0.6 337,803 - -0.1 337,803 - +0.0 337,803 - +0.2 337,803 - -1.6 337,949 + -0.1 337,949 + -0.4 337,968 + A4249_RS01770 0.11 -0.4 337,968 + A4249_RS01770 0.11 -0.1 337,968 + A4249_RS01770 0.11 +0.5 337,969 - A4249_RS01770 0.11 -0.8 337,969 - A4249_RS01770 0.11 +1.8 338,086 + A4249_RS01770 0.75 -0.1 338,086 + A4249_RS01770 0.75 -0.4 338,086 + A4249_RS01770 0.75 +0.0 338,086 + A4249_RS01770 0.75 -0.2 338,086 + A4249_RS01770 0.75 -0.3 338,086 + A4249_RS01770 0.75 +1.0 338,086 + A4249_RS01770 0.75 -1.1 338,086 + A4249_RS01770 0.75 -0.9 338,086 + A4249_RS01770 0.75 +0.0 338,087 - A4249_RS01770 0.76 +0.5 338,087 - A4249_RS01770 0.76 -0.7 338,087 - A4249_RS01770 0.76 +0.6 338,087 - A4249_RS01770 0.76 -0.7 338,087 - A4249_RS01770 0.76 +0.2 338,087 - A4249_RS01770 0.76 -0.4 338,087 - A4249_RS01770 0.76 -0.3 338,150 + +1.3 338,150 + -1.0 338,150 + -0.5 338,150 + -0.5 338,150 + -0.6 338,150 + +0.4 338,150 + +0.2 338,151 - -0.7 338,151 - +0.5 338,151 - -0.8 338,151 - -0.7 338,151 - -0.7 338,151 - +0.6 338,151 - -0.2 338,199 + -0.6 338,199 + -1.2 338,199 + -0.7 338,199 + -1.1 338,199 + -0.9 338,199 + -0.6 338,199 + +0.5 338,200 - -0.0 338,200 - -1.2 338,200 - -0.4 338,200 - +0.4 338,212 + -0.6 338,212 + -0.5 338,213 - -0.2 338,213 - -0.1 338,213 - +1.0 338,453 + -0.3 338,453 + -0.6 338,453 + -0.3 338,453 + -0.7 338,453 + -0.3 338,453 + -1.2 338,454 - +0.5 338,454 - -0.7 338,454 - -0.6 338,454 - +0.7 338,460 + +0.4 338,460 + +0.4 338,460 + +0.3 338,460 + -1.5 338,460 + -2.1 338,460 + -0.5 338,460 + +0.6 338,460 + +1.4 338,460 + +1.0 338,461 - +0.3 338,461 - +0.6 338,461 - -0.1 338,461 - +1.2 338,461 - +0.1 338,461 - +1.8 338,461 - -0.2 338,461 - -0.5 338,461 - +0.3 338,524 + +0.4 338,524 + +0.7 338,525 - -0.8 338,525 - +0.4 338,525 - +0.3 338,525 - -0.7 338,525 - +0.5 338,525 - +0.7 338,525 - -1.0 338,525 - +1.6 338,827 - A4249_RS01780 0.26 -0.7 338,928 + A4249_RS01780 0.39 -1.3 338,929 - A4249_RS01780 0.39 -0.8 338,929 - A4249_RS01780 0.39 -0.1 338,929 - A4249_RS01780 0.39 +0.5 338,929 - A4249_RS01780 0.39 +0.0 339,192 - A4249_RS01780 0.72 +1.0 339,192 - A4249_RS01780 0.72 +0.3 339,192 - A4249_RS01780 0.72 +0.8 339,292 - A4249_RS01780 0.85 +0.5 339,292 - A4249_RS01780 0.85 -0.3 339,292 - A4249_RS01780 0.85 -0.5 339,292 - A4249_RS01780 0.85 +0.6 339,292 - A4249_RS01780 0.85 +0.3 339,292 - A4249_RS01780 0.85 -1.2 339,292 - A4249_RS01780 0.85 -0.9 339,397 + -0.3 339,398 - +0.2 339,398 - +0.4 339,398 - -1.4 339,413 + +0.5 339,414 - -0.2 339,420 + -0.1 339,420 + -0.1 339,420 + +1.3 339,421 - +0.8 339,421 - +0.3 339,421 - -0.4 339,582 + A4249_RS01785 0.34 +0.0 339,582 + A4249_RS01785 0.34 +0.7 339,586 + A4249_RS01785 0.35 -0.9 339,586 + A4249_RS01785 0.35 +0.5 339,586 + A4249_RS01785 0.35 -0.6 339,586 + A4249_RS01785 0.35 +0.4 339,586 + A4249_RS01785 0.35 -0.1 339,586 + A4249_RS01785 0.35 -0.6 339,586 + A4249_RS01785 0.35 +0.0 339,586 + A4249_RS01785 0.35 +0.8 339,586 + A4249_RS01785 0.35 +0.2 339,586 + A4249_RS01785 0.35 -0.4 339,586 + A4249_RS01785 0.35 -1.6 339,586 + A4249_RS01785 0.35 -0.8 339,586 + A4249_RS01785 0.35 -0.8 339,586 + A4249_RS01785 0.35 -0.1 339,586 + A4249_RS01785 0.35 -1.1 339,587 - A4249_RS01785 0.35 +0.4 339,587 - A4249_RS01785 0.35 -1.1 339,587 - A4249_RS01785 0.35 -1.8 339,587 - A4249_RS01785 0.35 -0.6 339,587 - A4249_RS01785 0.35 +0.7 339,587 - A4249_RS01785 0.35 -0.7 339,587 - A4249_RS01785 0.35 -1.6 339,587 - A4249_RS01785 0.35 -0.2 339,587 - A4249_RS01785 0.35 -0.8 339,587 - A4249_RS01785 0.35 +0.0 339,587 - A4249_RS01785 0.35 +0.2 339,587 - A4249_RS01785 0.35 -0.6 339,587 - A4249_RS01785 0.35 +0.1 339,587 - A4249_RS01785 0.35 -0.6 339,587 - A4249_RS01785 0.35 -0.1 339,700 + A4249_RS01785 0.57 +0.5 339,898 - -0.1 339,898 - -0.6 340,060 + A4249_RS01790 0.11 +0.4 340,060 + A4249_RS01790 0.11 +1.0 340,060 + A4249_RS01790 0.11 +1.2 340,060 + A4249_RS01790 0.11 -1.0 340,061 - A4249_RS01790 0.11 -1.0 340,061 - A4249_RS01790 0.11 +0.4 340,072 + A4249_RS01790 0.12 -0.1 340,072 + A4249_RS01790 0.12 +0.2 340,073 - A4249_RS01790 0.12 -0.5 340,274 + A4249_RS01790 0.27 +0.4 340,274 + A4249_RS01790 0.27 +0.8 340,274 + A4249_RS01790 0.27 +0.1 340,275 - A4249_RS01790 0.27 +0.1 340,275 - A4249_RS01790 0.27 -0.5 340,275 - A4249_RS01790 0.27 -0.6 340,275 - A4249_RS01790 0.27 +0.4 340,321 + A4249_RS01790 0.31 +0.0 340,321 + A4249_RS01790 0.31 -2.0 340,321 + A4249_RS01790 0.31 +1.3 340,322 - A4249_RS01790 0.31 -0.4 340,322 - A4249_RS01790 0.31 -0.6 340,322 - A4249_RS01790 0.31 -0.4 340,372 + A4249_RS01790 0.34 -0.0 340,372 + A4249_RS01790 0.34 -0.8 340,372 + A4249_RS01790 0.34 -1.4 340,373 - A4249_RS01790 0.34 +0.8 340,373 - A4249_RS01790 0.34 +0.4 340,373 - A4249_RS01790 0.34 -0.4 340,373 - A4249_RS01790 0.34 -0.1
Or see this region's nucleotide sequence