Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00515

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00505 and A4249_RS00510 overlap by 4 nucleotidesA4249_RS00510 and A4249_RS00515 overlap by 1 nucleotidesA4249_RS00515 and A4249_RS00520 are separated by 87 nucleotides A4249_RS00505: A4249_RS00505 - GNAT family N-acetyltransferase, at 84,318 to 84,842 _RS00505 A4249_RS00510: A4249_RS00510 - DNA repair protein RadC, at 84,839 to 85,591 _RS00510 A4249_RS00515: A4249_RS00515 - hypothetical protein, at 85,591 to 86,082 _RS00515 A4249_RS00520: A4249_RS00520 - type I methionyl aminopeptidase, at 86,170 to 86,988 _RS00520 Position (kb) 85 86 87Strain fitness (log2 ratio) -2 -1 0 1 2at 84.616 kb on + strand, within A4249_RS00505at 84.616 kb on + strand, within A4249_RS00505at 84.616 kb on + strand, within A4249_RS00505at 84.617 kb on - strand, within A4249_RS00505at 84.617 kb on - strand, within A4249_RS00505at 84.663 kb on - strand, within A4249_RS00505at 84.914 kb on - strandat 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.179 kb on + strand, within A4249_RS00510at 85.179 kb on + strand, within A4249_RS00510at 85.179 kb on + strand, within A4249_RS00510at 85.180 kb on - strand, within A4249_RS00510at 85.308 kb on + strand, within A4249_RS00510at 85.309 kb on - strand, within A4249_RS00510at 85.309 kb on - strand, within A4249_RS00510at 85.421 kb on - strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.461 kb on + strand, within A4249_RS00510at 85.461 kb on + strand, within A4249_RS00510at 85.461 kb on + strand, within A4249_RS00510at 85.592 kb on + strandat 85.592 kb on + strandat 85.592 kb on + strandat 85.593 kb on - strandat 85.700 kb on + strand, within A4249_RS00515at 85.700 kb on + strand, within A4249_RS00515at 85.701 kb on - strand, within A4249_RS00515at 85.701 kb on - strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.832 kb on + strand, within A4249_RS00515at 85.832 kb on + strand, within A4249_RS00515at 85.832 kb on + strand, within A4249_RS00515at 85.833 kb on - strand, within A4249_RS00515at 85.880 kb on + strand, within A4249_RS00515at 85.880 kb on + strand, within A4249_RS00515at 85.880 kb on + strand, within A4249_RS00515at 85.881 kb on - strand, within A4249_RS00515at 85.881 kb on - strand, within A4249_RS00515at 85.881 kb on - strand, within A4249_RS00515at 85.881 kb on - strand, within A4249_RS00515at 85.881 kb on - strand, within A4249_RS00515at 86.062 kb on + strandat 86.069 kb on + strandat 86.070 kb on - strandat 86.082 kb on + strandat 86.082 kb on + strandat 86.082 kb on + strandat 86.082 kb on + strandat 86.082 kb on + strandat 86.082 kb on + strandat 86.082 kb on + strandat 86.083 kb on - strandat 86.083 kb on - strandat 86.083 kb on - strandat 86.103 kb on + strandat 86.115 kb on - strandat 86.985 kb on - strandat 87.047 kb on + strandat 87.048 kb on + strandat 87.048 kb on + strandat 87.049 kb on - strandat 87.049 kb on - strandat 87.049 kb on - strandat 87.049 kb on - strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.050 kb on + strandat 87.051 kb on - strandat 87.051 kb on - strandat 87.051 kb on - strandat 87.051 kb on - strandat 87.051 kb on - strandat 87.051 kb on - strandat 87.051 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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84,616 + A4249_RS00505 0.57 -0.1
84,616 + A4249_RS00505 0.57 -0.5
84,616 + A4249_RS00505 0.57 +0.2
84,617 - A4249_RS00505 0.57 -0.3
84,617 - A4249_RS00505 0.57 -0.4
84,663 - A4249_RS00505 0.66 -0.2
84,914 - +1.1
85,128 + A4249_RS00510 0.38 -0.6
85,128 + A4249_RS00510 0.38 +0.3
85,128 + A4249_RS00510 0.38 -1.6
85,128 + A4249_RS00510 0.38 +0.0
85,128 + A4249_RS00510 0.38 -0.3
85,128 + A4249_RS00510 0.38 -0.1
85,128 + A4249_RS00510 0.38 +0.6
85,129 - A4249_RS00510 0.39 +0.8
85,129 - A4249_RS00510 0.39 +0.0
85,129 - A4249_RS00510 0.39 -0.1
85,129 - A4249_RS00510 0.39 -0.2
85,129 - A4249_RS00510 0.39 -1.1
85,129 - A4249_RS00510 0.39 +0.4
85,179 + A4249_RS00510 0.45 -0.2
85,179 + A4249_RS00510 0.45 -0.4
85,179 + A4249_RS00510 0.45 -1.2
85,180 - A4249_RS00510 0.45 +0.7
85,308 + A4249_RS00510 0.62 +0.2
85,309 - A4249_RS00510 0.62 +0.5
85,309 - A4249_RS00510 0.62 -0.8
85,421 - A4249_RS00510 0.77 -0.3
85,422 + A4249_RS00510 0.77 +0.6
85,422 + A4249_RS00510 0.77 +1.5
85,422 + A4249_RS00510 0.77 -1.3
85,422 + A4249_RS00510 0.77 -0.3
85,423 - A4249_RS00510 0.78 -0.1
85,423 - A4249_RS00510 0.78 +0.1
85,423 - A4249_RS00510 0.78 -0.3
85,423 - A4249_RS00510 0.78 +1.5
85,423 - A4249_RS00510 0.78 -1.2
85,461 + A4249_RS00510 0.83 +0.3
85,461 + A4249_RS00510 0.83 -0.0
85,461 + A4249_RS00510 0.83 +0.3
85,592 + -0.3
85,592 + -1.1
85,592 + +0.1
85,593 - -0.2
85,700 + A4249_RS00515 0.22 +0.1
85,700 + A4249_RS00515 0.22 -0.6
85,701 - A4249_RS00515 0.22 -0.0
85,701 - A4249_RS00515 0.22 +0.7
85,800 + A4249_RS00515 0.42 -0.7
85,800 + A4249_RS00515 0.42 +0.7
85,800 + A4249_RS00515 0.42 +0.1
85,800 + A4249_RS00515 0.42 +0.8
85,800 + A4249_RS00515 0.42 +0.3
85,800 + A4249_RS00515 0.42 +0.2
85,800 + A4249_RS00515 0.42 -0.4
85,800 + A4249_RS00515 0.42 -0.9
85,800 + A4249_RS00515 0.42 -0.2
85,800 + A4249_RS00515 0.42 -0.1
85,800 + A4249_RS00515 0.42 +0.8
85,801 - A4249_RS00515 0.43 -0.8
85,801 - A4249_RS00515 0.43 +0.1
85,801 - A4249_RS00515 0.43 +0.1
85,801 - A4249_RS00515 0.43 -1.1
85,801 - A4249_RS00515 0.43 +0.3
85,801 - A4249_RS00515 0.43 -0.6
85,801 - A4249_RS00515 0.43 +0.3
85,801 - A4249_RS00515 0.43 +0.7
85,801 - A4249_RS00515 0.43 -0.3
85,801 - A4249_RS00515 0.43 +0.7
85,832 + A4249_RS00515 0.49 -0.2
85,832 + A4249_RS00515 0.49 -0.4
85,832 + A4249_RS00515 0.49 +0.1
85,833 - A4249_RS00515 0.49 -0.6
85,880 + A4249_RS00515 0.59 -0.8
85,880 + A4249_RS00515 0.59 -2.2
85,880 + A4249_RS00515 0.59 -0.5
85,881 - A4249_RS00515 0.59 +0.7
85,881 - A4249_RS00515 0.59 -0.1
85,881 - A4249_RS00515 0.59 +0.2
85,881 - A4249_RS00515 0.59 +0.1
85,881 - A4249_RS00515 0.59 +1.2
86,062 + -0.7
86,069 + -1.3
86,070 - -1.3
86,082 + -0.5
86,082 + +1.7
86,082 + +0.2
86,082 + +1.2
86,082 + +0.2
86,082 + +1.8
86,082 + +0.8
86,083 - +0.4
86,083 - -0.2
86,083 - +0.4
86,103 + +0.0
86,115 - -0.3
86,985 - +0.0
87,047 + -0.7
87,048 + +0.1
87,048 + +0.4
87,049 - -0.2
87,049 - -0.2
87,049 - -1.5
87,049 - +0.1
87,050 + +0.2
87,050 + +0.1
87,050 + -0.5
87,050 + +0.0
87,050 + -0.7
87,050 + -0.1
87,050 + +0.0
87,050 + +0.1
87,050 + -0.4
87,050 + +0.4
87,051 - +0.4
87,051 - -0.1
87,051 - +1.7
87,051 - -1.4
87,051 - +1.6
87,051 - +0.2
87,051 - -1.6

Or see this region's nucleotide sequence