Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00505

Experiment: Guanosine 0.35306 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00495 and A4249_RS00500 are separated by 5 nucleotidesA4249_RS00500 and A4249_RS00505 are separated by 56 nucleotidesA4249_RS00505 and A4249_RS00510 overlap by 4 nucleotidesA4249_RS00510 and A4249_RS00515 overlap by 1 nucleotides A4249_RS00495: A4249_RS00495 - aldo/keto reductase, at 83,111 to 84,013 _RS00495 A4249_RS00500: A4249_RS00500 - BolA family transcriptional regulator, at 84,019 to 84,261 _RS00500 A4249_RS00505: A4249_RS00505 - GNAT family N-acetyltransferase, at 84,318 to 84,842 _RS00505 A4249_RS00510: A4249_RS00510 - DNA repair protein RadC, at 84,839 to 85,591 _RS00510 A4249_RS00515: A4249_RS00515 - hypothetical protein, at 85,591 to 86,082 _RS00515 Position (kb) 84 85Strain fitness (log2 ratio) -2 -1 0 1 2at 83.398 kb on + strand, within A4249_RS00495at 83.398 kb on + strand, within A4249_RS00495at 83.398 kb on + strand, within A4249_RS00495at 83.399 kb on - strand, within A4249_RS00495at 83.399 kb on - strand, within A4249_RS00495at 83.424 kb on + strand, within A4249_RS00495at 83.424 kb on + strand, within A4249_RS00495at 83.424 kb on + strand, within A4249_RS00495at 83.424 kb on + strand, within A4249_RS00495at 83.425 kb on - strand, within A4249_RS00495at 83.425 kb on - strand, within A4249_RS00495at 83.425 kb on - strand, within A4249_RS00495at 83.425 kb on - strand, within A4249_RS00495at 83.433 kb on + strand, within A4249_RS00495at 83.547 kb on + strand, within A4249_RS00495at 83.547 kb on + strand, within A4249_RS00495at 83.547 kb on + strand, within A4249_RS00495at 83.547 kb on + strand, within A4249_RS00495at 83.547 kb on + strand, within A4249_RS00495at 83.547 kb on + strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.548 kb on - strand, within A4249_RS00495at 83.796 kb on + strand, within A4249_RS00495at 83.796 kb on + strand, within A4249_RS00495at 83.796 kb on + strand, within A4249_RS00495at 83.796 kb on + strand, within A4249_RS00495at 83.796 kb on + strand, within A4249_RS00495at 83.796 kb on + strand, within A4249_RS00495at 83.797 kb on - strand, within A4249_RS00495at 83.797 kb on - strand, within A4249_RS00495at 83.797 kb on - strand, within A4249_RS00495at 83.797 kb on - strand, within A4249_RS00495at 83.797 kb on - strand, within A4249_RS00495at 83.797 kb on - strand, within A4249_RS00495at 83.874 kb on + strand, within A4249_RS00495at 83.874 kb on + strand, within A4249_RS00495at 83.875 kb on - strand, within A4249_RS00495at 83.875 kb on - strand, within A4249_RS00495at 83.904 kb on + strand, within A4249_RS00495at 83.904 kb on + strand, within A4249_RS00495at 83.904 kb on + strand, within A4249_RS00495at 83.904 kb on + strand, within A4249_RS00495at 83.905 kb on - strand, within A4249_RS00495at 83.905 kb on - strand, within A4249_RS00495at 84.098 kb on + strand, within A4249_RS00500at 84.098 kb on + strand, within A4249_RS00500at 84.098 kb on + strand, within A4249_RS00500at 84.098 kb on + strand, within A4249_RS00500at 84.098 kb on + strand, within A4249_RS00500at 84.099 kb on - strand, within A4249_RS00500at 84.099 kb on - strand, within A4249_RS00500at 84.099 kb on - strand, within A4249_RS00500at 84.099 kb on - strand, within A4249_RS00500at 84.099 kb on - strand, within A4249_RS00500at 84.099 kb on - strand, within A4249_RS00500at 84.099 kb on - strand, within A4249_RS00500at 84.165 kb on - strand, within A4249_RS00500at 84.165 kb on - strand, within A4249_RS00500at 84.274 kb on + strandat 84.275 kb on - strandat 84.275 kb on - strandat 84.275 kb on - strandat 84.308 kb on + strandat 84.319 kb on + strandat 84.320 kb on - strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.367 kb on + strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.368 kb on - strandat 84.383 kb on - strand, within A4249_RS00505at 84.383 kb on - strand, within A4249_RS00505at 84.616 kb on + strand, within A4249_RS00505at 84.616 kb on + strand, within A4249_RS00505at 84.616 kb on + strand, within A4249_RS00505at 84.617 kb on - strand, within A4249_RS00505at 84.617 kb on - strand, within A4249_RS00505at 84.663 kb on - strand, within A4249_RS00505at 84.914 kb on - strandat 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.128 kb on + strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.129 kb on - strand, within A4249_RS00510at 85.179 kb on + strand, within A4249_RS00510at 85.179 kb on + strand, within A4249_RS00510at 85.179 kb on + strand, within A4249_RS00510at 85.180 kb on - strand, within A4249_RS00510at 85.308 kb on + strand, within A4249_RS00510at 85.309 kb on - strand, within A4249_RS00510at 85.309 kb on - strand, within A4249_RS00510at 85.421 kb on - strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.422 kb on + strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.423 kb on - strand, within A4249_RS00510at 85.461 kb on + strand, within A4249_RS00510at 85.461 kb on + strand, within A4249_RS00510at 85.461 kb on + strand, within A4249_RS00510at 85.592 kb on + strandat 85.592 kb on + strandat 85.592 kb on + strandat 85.593 kb on - strandat 85.700 kb on + strand, within A4249_RS00515at 85.700 kb on + strand, within A4249_RS00515at 85.701 kb on - strand, within A4249_RS00515at 85.701 kb on - strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.800 kb on + strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.801 kb on - strand, within A4249_RS00515at 85.832 kb on + strand, within A4249_RS00515at 85.832 kb on + strand, within A4249_RS00515at 85.832 kb on + strand, within A4249_RS00515at 85.833 kb on - strand, within A4249_RS00515

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanosine 0.35306 mM (C)
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83,398 + A4249_RS00495 0.32 +0.8
83,398 + A4249_RS00495 0.32 +0.9
83,398 + A4249_RS00495 0.32 -0.4
83,399 - A4249_RS00495 0.32 -0.1
83,399 - A4249_RS00495 0.32 +0.3
83,424 + A4249_RS00495 0.35 +0.4
83,424 + A4249_RS00495 0.35 -1.1
83,424 + A4249_RS00495 0.35 -0.8
83,424 + A4249_RS00495 0.35 -0.1
83,425 - A4249_RS00495 0.35 -0.4
83,425 - A4249_RS00495 0.35 +2.0
83,425 - A4249_RS00495 0.35 +0.4
83,425 - A4249_RS00495 0.35 -0.5
83,433 + A4249_RS00495 0.36 -0.2
83,547 + A4249_RS00495 0.48 +0.0
83,547 + A4249_RS00495 0.48 -0.6
83,547 + A4249_RS00495 0.48 -0.4
83,547 + A4249_RS00495 0.48 -0.6
83,547 + A4249_RS00495 0.48 -0.3
83,547 + A4249_RS00495 0.48 +0.2
83,548 - A4249_RS00495 0.48 -0.8
83,548 - A4249_RS00495 0.48 +0.2
83,548 - A4249_RS00495 0.48 -2.5
83,548 - A4249_RS00495 0.48 -0.5
83,548 - A4249_RS00495 0.48 -0.7
83,548 - A4249_RS00495 0.48 -1.4
83,548 - A4249_RS00495 0.48 -0.1
83,548 - A4249_RS00495 0.48 -0.3
83,548 - A4249_RS00495 0.48 -0.2
83,548 - A4249_RS00495 0.48 -0.6
83,796 + A4249_RS00495 0.76 -0.3
83,796 + A4249_RS00495 0.76 +0.5
83,796 + A4249_RS00495 0.76 +1.0
83,796 + A4249_RS00495 0.76 -0.1
83,796 + A4249_RS00495 0.76 -0.1
83,796 + A4249_RS00495 0.76 +0.2
83,797 - A4249_RS00495 0.76 +0.6
83,797 - A4249_RS00495 0.76 +0.3
83,797 - A4249_RS00495 0.76 +0.3
83,797 - A4249_RS00495 0.76 +0.1
83,797 - A4249_RS00495 0.76 +0.4
83,797 - A4249_RS00495 0.76 -1.0
83,874 + A4249_RS00495 0.84 +0.6
83,874 + A4249_RS00495 0.84 +0.2
83,875 - A4249_RS00495 0.85 -0.1
83,875 - A4249_RS00495 0.85 -0.0
83,904 + A4249_RS00495 0.88 -1.3
83,904 + A4249_RS00495 0.88 +1.6
83,904 + A4249_RS00495 0.88 -0.3
83,904 + A4249_RS00495 0.88 -0.4
83,905 - A4249_RS00495 0.88 -0.2
83,905 - A4249_RS00495 0.88 -0.4
84,098 + A4249_RS00500 0.33 -1.1
84,098 + A4249_RS00500 0.33 -1.1
84,098 + A4249_RS00500 0.33 +0.5
84,098 + A4249_RS00500 0.33 +1.0
84,098 + A4249_RS00500 0.33 -0.3
84,099 - A4249_RS00500 0.33 -0.8
84,099 - A4249_RS00500 0.33 -0.1
84,099 - A4249_RS00500 0.33 +0.4
84,099 - A4249_RS00500 0.33 +1.8
84,099 - A4249_RS00500 0.33 -1.4
84,099 - A4249_RS00500 0.33 -0.2
84,099 - A4249_RS00500 0.33 -0.5
84,165 - A4249_RS00500 0.60 +1.6
84,165 - A4249_RS00500 0.60 -0.1
84,274 + -0.5
84,275 - +2.2
84,275 - -0.1
84,275 - -0.3
84,308 + +0.3
84,319 + +0.5
84,320 - +0.6
84,367 + +2.6
84,367 + -1.1
84,367 + +0.1
84,367 + +0.8
84,367 + -0.2
84,367 + -0.6
84,367 + -0.1
84,367 + +0.2
84,367 + -1.1
84,367 + -0.4
84,367 + +1.4
84,367 + -0.2
84,367 + -0.6
84,368 - +1.1
84,368 - +0.4
84,368 - -0.1
84,368 - +1.3
84,368 - -0.8
84,368 - +0.2
84,368 - -0.0
84,368 - +0.2
84,368 - +0.4
84,383 - A4249_RS00505 0.12 +0.8
84,383 - A4249_RS00505 0.12 +0.8
84,616 + A4249_RS00505 0.57 -0.1
84,616 + A4249_RS00505 0.57 -0.5
84,616 + A4249_RS00505 0.57 +0.2
84,617 - A4249_RS00505 0.57 -0.3
84,617 - A4249_RS00505 0.57 -0.4
84,663 - A4249_RS00505 0.66 -0.2
84,914 - +1.1
85,128 + A4249_RS00510 0.38 -0.6
85,128 + A4249_RS00510 0.38 +0.3
85,128 + A4249_RS00510 0.38 -1.6
85,128 + A4249_RS00510 0.38 +0.0
85,128 + A4249_RS00510 0.38 -0.3
85,128 + A4249_RS00510 0.38 -0.1
85,128 + A4249_RS00510 0.38 +0.6
85,129 - A4249_RS00510 0.39 +0.8
85,129 - A4249_RS00510 0.39 +0.0
85,129 - A4249_RS00510 0.39 -0.1
85,129 - A4249_RS00510 0.39 -0.2
85,129 - A4249_RS00510 0.39 -1.1
85,129 - A4249_RS00510 0.39 +0.4
85,179 + A4249_RS00510 0.45 -0.2
85,179 + A4249_RS00510 0.45 -0.4
85,179 + A4249_RS00510 0.45 -1.2
85,180 - A4249_RS00510 0.45 +0.7
85,308 + A4249_RS00510 0.62 +0.2
85,309 - A4249_RS00510 0.62 +0.5
85,309 - A4249_RS00510 0.62 -0.8
85,421 - A4249_RS00510 0.77 -0.3
85,422 + A4249_RS00510 0.77 +0.6
85,422 + A4249_RS00510 0.77 +1.5
85,422 + A4249_RS00510 0.77 -1.3
85,422 + A4249_RS00510 0.77 -0.3
85,423 - A4249_RS00510 0.78 -0.1
85,423 - A4249_RS00510 0.78 +0.1
85,423 - A4249_RS00510 0.78 -0.3
85,423 - A4249_RS00510 0.78 +1.5
85,423 - A4249_RS00510 0.78 -1.2
85,461 + A4249_RS00510 0.83 +0.3
85,461 + A4249_RS00510 0.83 -0.0
85,461 + A4249_RS00510 0.83 +0.3
85,592 + -0.3
85,592 + -1.1
85,592 + +0.1
85,593 - -0.2
85,700 + A4249_RS00515 0.22 +0.1
85,700 + A4249_RS00515 0.22 -0.6
85,701 - A4249_RS00515 0.22 -0.0
85,701 - A4249_RS00515 0.22 +0.7
85,800 + A4249_RS00515 0.42 -0.7
85,800 + A4249_RS00515 0.42 +0.7
85,800 + A4249_RS00515 0.42 +0.1
85,800 + A4249_RS00515 0.42 +0.8
85,800 + A4249_RS00515 0.42 +0.3
85,800 + A4249_RS00515 0.42 +0.2
85,800 + A4249_RS00515 0.42 -0.4
85,800 + A4249_RS00515 0.42 -0.9
85,800 + A4249_RS00515 0.42 -0.2
85,800 + A4249_RS00515 0.42 -0.1
85,800 + A4249_RS00515 0.42 +0.8
85,801 - A4249_RS00515 0.43 -0.8
85,801 - A4249_RS00515 0.43 +0.1
85,801 - A4249_RS00515 0.43 +0.1
85,801 - A4249_RS00515 0.43 -1.1
85,801 - A4249_RS00515 0.43 +0.3
85,801 - A4249_RS00515 0.43 -0.6
85,801 - A4249_RS00515 0.43 +0.3
85,801 - A4249_RS00515 0.43 +0.7
85,801 - A4249_RS00515 0.43 -0.3
85,801 - A4249_RS00515 0.43 +0.7
85,832 + A4249_RS00515 0.49 -0.2
85,832 + A4249_RS00515 0.49 -0.4
85,832 + A4249_RS00515 0.49 +0.1
85,833 - A4249_RS00515 0.49 -0.6

Or see this region's nucleotide sequence