Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06185

Experiment: Biofilm; Day4; SGW; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day4; SGW; Manganese (II) chloride tetrahydrate 10mM
1,416,262	+		LRK53_RS06170	0.55	+1.5
1,416,263	-		LRK53_RS06170	0.55	-0.4
1,416,263	-		LRK53_RS06170	0.55	-3.0
1,416,319	+		LRK53_RS06170	0.67	-0.2
1,416,391	+		LRK53_RS06170	0.81	-1.1
1,416,391	+		LRK53_RS06170	0.81	-1.0
1,416,391	+		LRK53_RS06170	0.81	-2.0
1,416,391	+		LRK53_RS06170	0.81	+0.3
1,416,391	+		LRK53_RS06170	0.81	+1.8
1,416,391	+		LRK53_RS06170	0.81	-0.1
1,416,391	+		LRK53_RS06170	0.81	-0.6
1,416,392	-		LRK53_RS06170	0.82	-1.0
1,416,392	-		LRK53_RS06170	0.82	-0.9
1,416,392	-		LRK53_RS06170	0.82	-1.7
1,416,528	+		LRK53_RS06175	0.18	-1.1
1,416,528	+		LRK53_RS06175	0.18	-2.2
1,416,528	+		LRK53_RS06175	0.18	+0.4
1,416,529	-		LRK53_RS06175	0.18	+0.2
1,416,529	-		LRK53_RS06175	0.18	+1.3
1,416,745	-				-0.5
1,416,927	+		LRK53_RS06180	0.39	-0.4
1,416,928	-		LRK53_RS06180	0.40	-0.2
1,416,933	+		LRK53_RS06180	0.41	-0.6
1,416,934	-		LRK53_RS06180	0.41	-1.6
1,416,934	-		LRK53_RS06180	0.41	-2.1
1,416,951	+		LRK53_RS06180	0.46	-2.0
1,416,951	+		LRK53_RS06180	0.46	-0.5
1,416,951	+		LRK53_RS06180	0.46	-0.8
1,416,951	+		LRK53_RS06180	0.46	-0.9
1,416,951	+		LRK53_RS06180	0.46	+0.3
1,416,951	+		LRK53_RS06180	0.46	-1.3
1,416,951	+		LRK53_RS06180	0.46	-0.7
1,416,951	+		LRK53_RS06180	0.46	-1.0
1,416,952	-		LRK53_RS06180	0.46	-0.4
1,416,952	-		LRK53_RS06180	0.46	+0.6
1,416,952	-		LRK53_RS06180	0.46	-2.4
1,416,952	-		LRK53_RS06180	0.46	-0.4
1,416,952	-		LRK53_RS06180	0.46	-1.1
1,417,182	+				-1.0
1,417,182	+				-3.1
1,417,182	+				-0.8
1,417,183	-				+0.4
1,417,183	-				-0.1
1,417,183	-				-1.9
1,417,305	+				-1.3
1,417,305	+				-1.0
1,417,305	+				-0.7
1,417,305	+				-0.6
1,417,305	+				-1.1
1,417,305	+				-0.4
1,417,305	+				+1.2
1,417,305	+				-2.1
1,417,305	+				-0.0
1,417,305	+				-0.1
1,417,305	+				+1.6
1,417,305	+				+2.5
1,417,305	+				+1.2
1,417,306	-				-1.0
1,417,306	-				-0.5
1,417,306	-				-1.2
1,417,306	-				-1.4
1,417,306	-				+0.9
1,417,306	-				-0.5
1,417,306	-				-0.6
1,417,306	-				+0.4
1,417,306	-				+0.6
1,417,306	-				-1.7
1,417,306	-				-0.8
1,417,306	-				+1.4
1,417,306	-				+0.6
1,417,306	-				+0.0
1,417,306	-				-1.3
1,417,306	-				-0.2
1,417,306	-				+0.6
1,417,306	-				+0.6
1,417,307	+				+0.9
1,417,307	+				-0.8
1,417,307	+				-1.5
1,417,307	+				+2.6
1,417,307	+				-2.2
1,417,307	+				-0.7
1,417,307	+				-1.2
1,417,307	+				+0.2
1,417,307	+				-2.6
1,417,307	+				-1.0
1,417,307	+				-1.1
1,417,307	+				+0.6
1,417,307	+				-0.5
1,417,307	+				-0.8
1,417,307	+				-1.7
1,417,307	+				-0.9
1,417,307	+				-3.4
1,417,307	+				-1.5
1,417,307	+				-1.6
1,417,307	+				+2.5
1,417,307	+				+2.5
1,417,307	+				+1.2
1,417,307	+				-0.7
1,417,307	+				-0.9
1,417,308	-				+0.9
1,417,308	-				-2.7
1,417,308	-				-1.5
1,417,308	-				-0.8
1,417,308	-				-1.6
1,417,308	-				-1.1
1,417,308	-				-1.6
1,417,308	-				-2.9
1,417,308	-				+0.8
1,417,308	-				-2.2
1,417,308	-				-1.4
1,417,308	-				-2.7
1,417,308	-				-0.3
1,417,308	-				-0.1
1,417,308	-				+0.3
1,417,308	-				+0.1
1,417,334	+				+0.1
1,417,335	-				+0.6
1,417,373	+				-1.8
1,417,373	+				-0.7
1,417,374	-				+0.1
1,417,374	-				-0.6
1,417,374	-				-0.5
1,417,374	-				-0.8
1,417,445	+		LRK53_RS06185	0.14	+0.7
1,417,446	-		LRK53_RS06185	0.14	-0.8
1,417,446	-		LRK53_RS06185	0.14	-1.4
1,417,515	+		LRK53_RS06185	0.19	+0.2
1,417,515	+		LRK53_RS06185	0.19	-2.6
1,417,515	+		LRK53_RS06185	0.19	-0.2
1,417,516	-		LRK53_RS06185	0.19	+0.8
1,417,586	+		LRK53_RS06185	0.24	-0.5
1,417,586	+		LRK53_RS06185	0.24	+0.7
1,417,586	+		LRK53_RS06185	0.24	-0.3
1,417,586	+		LRK53_RS06185	0.24	+0.2
1,417,586	+		LRK53_RS06185	0.24	-1.3
1,417,586	+		LRK53_RS06185	0.24	+1.3
1,417,586	+		LRK53_RS06185	0.24	-2.5
1,417,586	+		LRK53_RS06185	0.24	-0.3
1,417,586	+		LRK53_RS06185	0.24	+0.3
1,417,586	+		LRK53_RS06185	0.24	-0.5
1,417,586	+		LRK53_RS06185	0.24	-0.3
1,417,586	+		LRK53_RS06185	0.24	-2.1
1,417,586	+		LRK53_RS06185	0.24	-0.6
1,417,586	+		LRK53_RS06185	0.24	-0.8
1,417,586	+		LRK53_RS06185	0.24	+0.4
1,417,586	+		LRK53_RS06185	0.24	-0.8
1,417,586	+		LRK53_RS06185	0.24	-1.0
1,417,586	+		LRK53_RS06185	0.24	-1.9
1,417,586	+		LRK53_RS06185	0.24	+0.7
1,417,586	+		LRK53_RS06185	0.24	-1.7
1,417,586	+		LRK53_RS06185	0.24	-1.9
1,417,586	+		LRK53_RS06185	0.24	-1.3
1,417,586	+		LRK53_RS06185	0.24	+0.6
1,417,586	+		LRK53_RS06185	0.24	-1.4
1,417,587	-		LRK53_RS06185	0.24	+1.6
1,417,587	-		LRK53_RS06185	0.24	+1.0
1,417,587	-		LRK53_RS06185	0.24	+0.2
1,417,587	-		LRK53_RS06185	0.24	-0.7
1,417,587	-		LRK53_RS06185	0.24	-0.8
1,417,587	-		LRK53_RS06185	0.24	-1.0
1,417,587	-		LRK53_RS06185	0.24	-1.0
1,417,587	-		LRK53_RS06185	0.24	+0.0
1,417,587	-		LRK53_RS06185	0.24	+0.1
1,417,587	-		LRK53_RS06185	0.24	-1.1
1,417,587	-		LRK53_RS06185	0.24	-0.5
1,417,587	-		LRK53_RS06185	0.24	+2.2
1,417,587	-		LRK53_RS06185	0.24	-1.1
1,417,587	-		LRK53_RS06185	0.24	-0.1
1,417,587	-		LRK53_RS06185	0.24	+2.0
1,417,587	-		LRK53_RS06185	0.24	+0.5
1,417,587	-		LRK53_RS06185	0.24	-0.7
1,417,587	-		LRK53_RS06185	0.24	-1.9
1,417,587	-		LRK53_RS06185	0.24	+0.6
1,417,587	-		LRK53_RS06185	0.24	-1.8
1,417,587	-		LRK53_RS06185	0.24	-1.4
1,417,587	-		LRK53_RS06185	0.24	+0.3
1,417,624	+		LRK53_RS06185	0.26	-0.8
1,417,659	+		LRK53_RS06185	0.29	-0.8
1,417,701	+		LRK53_RS06185	0.32	-1.9
1,417,702	-		LRK53_RS06185	0.32	-0.5
1,417,728	+		LRK53_RS06185	0.34	+2.3
1,417,790	+		LRK53_RS06185	0.38	-1.8
1,417,790	+		LRK53_RS06185	0.38	+1.1
1,417,791	-		LRK53_RS06185	0.38	-1.3
1,417,982	+		LRK53_RS06185	0.51	-0.8
1,417,982	+		LRK53_RS06185	0.51	+0.7
1,417,982	+		LRK53_RS06185	0.51	-1.1
1,417,982	+		LRK53_RS06185	0.51	-0.5
1,417,983	-		LRK53_RS06185	0.52	-0.4
1,417,983	-		LRK53_RS06185	0.52	-1.5
1,417,983	-		LRK53_RS06185	0.52	-1.5
1,417,983	-		LRK53_RS06185	0.52	-1.5
1,417,983	-		LRK53_RS06185	0.52	-1.3
1,417,983	-		LRK53_RS06185	0.52	-1.0
1,418,009	+		LRK53_RS06185	0.53	-0.6
1,418,010	-		LRK53_RS06185	0.53	+1.1
1,418,010	-		LRK53_RS06185	0.53	-1.4
1,418,018	+		LRK53_RS06185	0.54	-1.8
1,418,018	+		LRK53_RS06185	0.54	+1.4
1,418,056	+		LRK53_RS06185	0.57	-0.0
1,418,056	+		LRK53_RS06185	0.57	-1.0
1,418,056	+		LRK53_RS06185	0.57	+1.5
1,418,057	-		LRK53_RS06185	0.57	-0.5
1,418,057	-		LRK53_RS06185	0.57	+0.1
1,418,078	+		LRK53_RS06185	0.58	-2.3
1,418,078	+		LRK53_RS06185	0.58	-1.8
1,418,078	+		LRK53_RS06185	0.58	-0.6
1,418,078	+		LRK53_RS06185	0.58	-0.8
1,418,078	+		LRK53_RS06185	0.58	-0.2
1,418,078	+		LRK53_RS06185	0.58	+0.4
1,418,078	+		LRK53_RS06185	0.58	-0.2
1,418,079	-		LRK53_RS06185	0.58	-1.5
1,418,079	-		LRK53_RS06185	0.58	-0.7
1,418,079	-		LRK53_RS06185	0.58	+0.6
1,418,079	-		LRK53_RS06185	0.58	+0.1
1,418,120	+		LRK53_RS06185	0.61	-1.4
1,418,120	+		LRK53_RS06185	0.61	-2.2
1,418,120	+		LRK53_RS06185	0.61	-0.8
1,418,121	-		LRK53_RS06185	0.61	-0.4
1,418,192	+		LRK53_RS06185	0.66	+0.7
1,418,192	+		LRK53_RS06185	0.66	-1.0
1,418,192	+		LRK53_RS06185	0.66	+1.0
1,418,192	+		LRK53_RS06185	0.66	+0.0
1,418,192	+		LRK53_RS06185	0.66	-1.3
1,418,192	+		LRK53_RS06185	0.66	-0.1
1,418,192	+		LRK53_RS06185	0.66	+0.8
1,418,192	+		LRK53_RS06185	0.66	+0.7
1,418,192	+		LRK53_RS06185	0.66	+1.0
1,418,192	+		LRK53_RS06185	0.66	-0.4
1,418,192	+		LRK53_RS06185	0.66	+2.1
1,418,192	+		LRK53_RS06185	0.66	-1.0
1,418,192	+		LRK53_RS06185	0.66	-1.8
1,418,192	+		LRK53_RS06185	0.66	-0.4
1,418,192	+		LRK53_RS06185	0.66	-1.4
1,418,193	-		LRK53_RS06185	0.66	+0.1
1,418,193	-		LRK53_RS06185	0.66	-1.0
1,418,193	-		LRK53_RS06185	0.66	-1.3
1,418,193	-		LRK53_RS06185	0.66	-0.7
1,418,193	-		LRK53_RS06185	0.66	-2.1
1,418,193	-		LRK53_RS06185	0.66	-2.4
1,418,193	-		LRK53_RS06185	0.66	+1.5
1,418,193	-		LRK53_RS06185	0.66	-0.8
1,418,193	-		LRK53_RS06185	0.66	-0.7
1,418,193	-		LRK53_RS06185	0.66	-0.3
1,418,193	-		LRK53_RS06185	0.66	-0.3
1,418,193	-		LRK53_RS06185	0.66	-2.1
1,418,193	-		LRK53_RS06185	0.66	-1.2
1,418,193	-		LRK53_RS06185	0.66	+1.5
1,418,193	-		LRK53_RS06185	0.66	-0.8
1,418,198	+		LRK53_RS06185	0.67	-0.7
1,418,199	-		LRK53_RS06185	0.67	-0.0
1,418,199	-		LRK53_RS06185	0.67	-1.6
1,418,211	-		LRK53_RS06185	0.68	+1.7
1,418,348	+		LRK53_RS06185	0.77	-0.3
1,418,348	+		LRK53_RS06185	0.77	-1.8
1,418,348	+		LRK53_RS06185	0.77	-0.8
1,418,348	+		LRK53_RS06185	0.77	-0.1
1,418,348	+		LRK53_RS06185	0.77	-0.1
1,418,348	+		LRK53_RS06185	0.77	+2.6
1,418,348	+		LRK53_RS06185	0.77	-1.3
1,418,348	+		LRK53_RS06185	0.77	+0.2
1,418,349	-		LRK53_RS06185	0.77	+0.4
1,418,349	-		LRK53_RS06185	0.77	-2.2
1,418,349	-		LRK53_RS06185	0.77	-0.7
1,418,349	-		LRK53_RS06185	0.77	-2.4
1,418,349	-		LRK53_RS06185	0.77	+1.2
1,418,498	+		LRK53_RS06185	0.88	-0.7
1,418,499	-		LRK53_RS06185	0.88	-1.2
1,418,501	+		LRK53_RS06185	0.88	+0.4
1,418,501	+		LRK53_RS06185	0.88	+1.6
1,418,502	-		LRK53_RS06185	0.88	-0.8
1,418,502	-		LRK53_RS06185	0.88	+0.3
1,418,502	-		LRK53_RS06185	0.88	+0.5
1,418,502	-		LRK53_RS06185	0.88	-0.7
1,418,502	-		LRK53_RS06185	0.88	-1.1
1,418,502	-		LRK53_RS06185	0.88	+0.3
1,418,502	-		LRK53_RS06185	0.88	-0.5
1,418,546	+				-0.4
1,418,546	+				-0.4
1,418,547	-				-0.8
1,418,591	+				-1.0
1,418,592	-				-1.5
1,418,730	+				-1.2
1,418,730	+				+0.9
1,418,730	+				-0.4
1,418,730	+				-0.4
1,418,731	-				-0.4
1,418,731	-				-1.0
1,418,731	-				-2.1
1,418,731	-				-1.5
1,418,731	-				-0.6
1,418,742	+				-0.1
1,418,742	+				+0.3
1,418,742	+				-3.3
1,418,742	+				-1.0
1,418,742	+				-0.5
1,418,742	+				-1.0
1,418,742	+				+1.8
1,418,743	-				-0.3
1,418,743	-				+0.6
1,418,743	-				+1.5
1,418,743	-				-2.0
1,418,743	-				+0.4
1,418,743	-				+0.5
1,418,743	-				-2.7
1,418,743	-				-3.5
1,418,743	-				-1.2
1,418,743	-				-1.3
1,418,768	-				-1.9
1,418,844	+		LRK53_RS06190	0.21	+0.2
1,418,845	-		LRK53_RS06190	0.23	+0.2
1,418,878	+				-0.5
1,418,879	-				-0.8
1,418,879	-				-0.5
1,418,890	+				-1.2
1,418,890	+				+1.0
1,418,890	+				-0.1
1,418,890	+				-2.5
1,418,890	+				-0.9
1,418,890	+				-0.8
1,418,890	+				-0.4
1,418,890	+				+0.4
1,418,890	+				+1.0
1,418,891	-				-0.3
1,418,891	-				+0.6
1,418,891	-				-0.5
1,418,891	-				+1.0
1,418,891	-				+0.4
1,418,891	-				+1.1
1,418,891	-				+1.2
1,418,891	-				-0.9
1,418,891	-				-0.1
1,418,891	-				-1.4
1,418,891	-				-0.2
1,418,946	+		LRK53_RS06195	0.14	-0.3
1,418,946	+		LRK53_RS06195	0.14	-1.2
1,419,010	+		LRK53_RS06195	0.25	+1.4
1,419,061	+		LRK53_RS06195	0.33	-1.0
1,419,061	+		LRK53_RS06195	0.33	-1.6
1,419,061	+		LRK53_RS06195	0.33	+0.9
1,419,061	+		LRK53_RS06195	0.33	+0.9
1,419,061	+		LRK53_RS06195	0.33	+0.6
1,419,061	+		LRK53_RS06195	0.33	-0.8
1,419,061	+		LRK53_RS06195	0.33	-1.3
1,419,062	-		LRK53_RS06195	0.34	-2.3
1,419,062	-		LRK53_RS06195	0.34	+0.2
1,419,062	-		LRK53_RS06195	0.34	-1.2
1,419,062	-		LRK53_RS06195	0.34	-2.8
1,419,062	-		LRK53_RS06195	0.34	-0.5
1,419,302	+		LRK53_RS06195	0.74	-1.9
1,419,303	-		LRK53_RS06195	0.74	-2.0
1,419,303	-		LRK53_RS06195	0.74	-0.5
1,419,304	+		LRK53_RS06195	0.74	+0.5
1,419,304	+		LRK53_RS06195	0.74	-0.3
1,419,304	+		LRK53_RS06195	0.74	+1.6
1,419,304	+		LRK53_RS06195	0.74	+2.3
1,419,304	+		LRK53_RS06195	0.74	-1.0
1,419,304	+		LRK53_RS06195	0.74	-1.1
1,419,304	+		LRK53_RS06195	0.74	+0.1
1,419,304	+		LRK53_RS06195	0.74	-0.4
1,419,304	+		LRK53_RS06195	0.74	-0.5
1,419,320	-		LRK53_RS06195	0.77	+1.1
1,419,320	-		LRK53_RS06195	0.77	-0.0
1,419,320	-		LRK53_RS06195	0.77	-1.2
1,419,432	+				-0.9
1,419,433	-				-1.8