Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04900

Experiment: Biofilm; Day4; SGW; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm; Day4; SGW; Manganese (II) chloride tetrahydrate 10mM
1,137,595	+		LRK53_RS04895	0.27	+0.6
1,137,595	+		LRK53_RS04895	0.27	-1.8
1,137,595	+		LRK53_RS04895	0.27	-2.8
1,137,595	+		LRK53_RS04895	0.27	-0.6
1,137,595	+		LRK53_RS04895	0.27	-0.5
1,137,595	+		LRK53_RS04895	0.27	-0.4
1,137,595	+		LRK53_RS04895	0.27	+1.1
1,137,596	-		LRK53_RS04895	0.27	+1.0
1,137,977	+		LRK53_RS04895	0.68	-0.9
1,137,978	-		LRK53_RS04895	0.68	+0.6
1,138,057	+		LRK53_RS04895	0.76	-1.0
1,138,057	+		LRK53_RS04895	0.76	-1.3
1,138,057	+		LRK53_RS04895	0.76	+1.0
1,138,057	+		LRK53_RS04895	0.76	-0.5
1,138,057	+		LRK53_RS04895	0.76	-2.3
1,138,057	+		LRK53_RS04895	0.76	+1.0
1,138,057	+		LRK53_RS04895	0.76	-1.9
1,138,057	+		LRK53_RS04895	0.76	+1.2
1,138,058	-		LRK53_RS04895	0.76	-0.3
1,138,058	-		LRK53_RS04895	0.76	+1.2
1,138,058	-		LRK53_RS04895	0.76	+0.3
1,138,058	-		LRK53_RS04895	0.76	+0.4
1,138,058	-		LRK53_RS04895	0.76	-1.7
1,138,058	-		LRK53_RS04895	0.76	-0.9
1,138,058	-		LRK53_RS04895	0.76	-0.5
1,138,430	+				+2.3
1,138,430	+				-2.2
1,138,430	+				+0.4
1,138,430	+				-1.6
1,138,430	+				-1.3
1,138,430	+				+0.3
1,138,430	+				-0.0
1,138,430	+				-1.7
1,138,430	+				-0.9
1,138,431	-				+0.2
1,138,431	-				+1.5
1,138,431	-				+0.9
1,138,431	-				+1.6
1,138,431	-				-2.6
1,138,431	-				-0.8
1,138,448	+				-2.7
1,138,514	+				+0.1
1,138,515	-				+0.2
1,138,515	-				-2.8
1,138,515	-				-1.2
1,138,515	-				-0.6
1,138,515	-				-0.6
1,138,625	+		LRK53_RS04900	0.14	-1.3
1,138,626	-		LRK53_RS04900	0.14	-1.0
1,138,626	-		LRK53_RS04900	0.14	-1.6
1,138,628	+		LRK53_RS04900	0.15	+0.2
1,138,628	+		LRK53_RS04900	0.15	+1.3
1,138,628	+		LRK53_RS04900	0.15	-1.3
1,138,628	+		LRK53_RS04900	0.15	+0.4
1,138,629	-		LRK53_RS04900	0.15	+0.5
1,138,629	-		LRK53_RS04900	0.15	-2.7
1,138,629	-		LRK53_RS04900	0.15	-0.0
1,138,629	-		LRK53_RS04900	0.15	-1.7
1,138,640	+		LRK53_RS04900	0.15	-0.8
1,138,640	+		LRK53_RS04900	0.15	-1.0
1,138,640	+		LRK53_RS04900	0.15	-0.2
1,138,640	+		LRK53_RS04900	0.15	-0.1
1,138,640	+		LRK53_RS04900	0.15	-0.3
1,138,640	+		LRK53_RS04900	0.15	+0.7
1,138,640	+		LRK53_RS04900	0.15	-1.0
1,138,641	-		LRK53_RS04900	0.15	-1.4
1,138,641	-		LRK53_RS04900	0.15	-0.6
1,138,641	-		LRK53_RS04900	0.15	-1.9
1,138,641	-		LRK53_RS04900	0.15	-0.5
1,138,641	-		LRK53_RS04900	0.15	-0.5
1,138,641	-		LRK53_RS04900	0.15	+0.1
1,138,641	-		LRK53_RS04900	0.15	-1.6
1,138,884	-		LRK53_RS04900	0.27	-0.3
1,138,884	-		LRK53_RS04900	0.27	+1.5
1,138,884	-		LRK53_RS04900	0.27	-0.5
1,138,884	-		LRK53_RS04900	0.27	-1.4
1,139,030	+		LRK53_RS04900	0.34	-1.2
1,139,031	-		LRK53_RS04900	0.34	-1.1
1,139,031	-		LRK53_RS04900	0.34	+1.0
1,139,031	-		LRK53_RS04900	0.34	+0.2
1,139,252	+		LRK53_RS04900	0.44	-0.9
1,139,252	+		LRK53_RS04900	0.44	+0.1
1,139,252	+		LRK53_RS04900	0.44	-0.9
1,139,252	+		LRK53_RS04900	0.44	-1.0
1,139,252	+		LRK53_RS04900	0.44	-1.4
1,139,252	+		LRK53_RS04900	0.44	+0.3
1,139,252	+		LRK53_RS04900	0.44	+1.0
1,139,252	+		LRK53_RS04900	0.44	-2.3
1,139,252	+		LRK53_RS04900	0.44	-1.2
1,139,252	+		LRK53_RS04900	0.44	-0.8
1,139,252	+		LRK53_RS04900	0.44	-1.5
1,139,252	+		LRK53_RS04900	0.44	+0.4
1,139,253	-		LRK53_RS04900	0.44	+1.5
1,139,253	-		LRK53_RS04900	0.44	-0.8
1,139,253	-		LRK53_RS04900	0.44	-1.3
1,139,253	-		LRK53_RS04900	0.44	+0.3
1,139,253	-		LRK53_RS04900	0.44	-2.1
1,139,253	-		LRK53_RS04900	0.44	-2.2
1,139,253	-		LRK53_RS04900	0.44	-1.2
1,139,253	-		LRK53_RS04900	0.44	+0.5
1,139,253	-		LRK53_RS04900	0.44	-2.0
1,139,253	-		LRK53_RS04900	0.44	-0.3
1,139,253	-		LRK53_RS04900	0.44	-1.4
1,139,288	+		LRK53_RS04900	0.46	+1.3
1,139,288	+		LRK53_RS04900	0.46	-0.4
1,139,288	+		LRK53_RS04900	0.46	+1.6
1,139,289	-		LRK53_RS04900	0.46	-2.8
1,139,289	-		LRK53_RS04900	0.46	-1.0
1,139,289	-		LRK53_RS04900	0.46	-2.0
1,139,289	-		LRK53_RS04900	0.46	-2.5
1,139,289	-		LRK53_RS04900	0.46	-1.5
1,139,438	+		LRK53_RS04900	0.53	-0.9
1,139,438	+		LRK53_RS04900	0.53	+0.7
1,139,438	+		LRK53_RS04900	0.53	-1.0
1,139,438	+		LRK53_RS04900	0.53	-1.2
1,139,439	-		LRK53_RS04900	0.53	+0.8
1,139,480	+		LRK53_RS04900	0.55	+1.1
1,139,480	+		LRK53_RS04900	0.55	-0.6
1,139,480	+		LRK53_RS04900	0.55	-0.5
1,139,480	+		LRK53_RS04900	0.55	+0.4
1,139,480	+		LRK53_RS04900	0.55	-1.1
1,139,481	-		LRK53_RS04900	0.55	-1.4
1,139,481	-		LRK53_RS04900	0.55	-3.6
1,139,481	-		LRK53_RS04900	0.55	+1.3
1,139,520	-		LRK53_RS04900	0.57	+0.1
1,139,588	+		LRK53_RS04900	0.60	-2.2
1,139,588	+		LRK53_RS04900	0.60	+1.4
1,139,588	+		LRK53_RS04900	0.60	-3.6
1,139,589	-		LRK53_RS04900	0.60	-2.2
1,139,589	-		LRK53_RS04900	0.60	+0.4
1,139,589	-		LRK53_RS04900	0.60	-0.2
1,139,589	-		LRK53_RS04900	0.60	-2.2
1,139,589	-		LRK53_RS04900	0.60	-1.3
1,139,589	-		LRK53_RS04900	0.60	-0.0
1,139,589	-		LRK53_RS04900	0.60	-1.6
1,139,765	+		LRK53_RS04900	0.68	-1.9
1,139,766	-		LRK53_RS04900	0.69	+0.0
1,139,870	+		LRK53_RS04900	0.73	-0.2
1,139,870	+		LRK53_RS04900	0.73	+2.3
1,139,871	-		LRK53_RS04900	0.73	-0.2
1,139,871	-		LRK53_RS04900	0.73	-1.8
1,139,871	-		LRK53_RS04900	0.73	-0.3
1,139,871	-		LRK53_RS04900	0.73	-0.2
1,139,871	-		LRK53_RS04900	0.73	-1.5
1,139,934	-		LRK53_RS04900	0.76	-2.0
1,140,050	+		LRK53_RS04900	0.82	-0.3
1,140,051	-		LRK53_RS04900	0.82	-1.7
1,140,194	+		LRK53_RS04900	0.89	-1.7
1,140,194	+		LRK53_RS04900	0.89	+0.9
1,140,194	+		LRK53_RS04900	0.89	-0.9
1,140,195	-		LRK53_RS04900	0.89	-0.8
1,140,195	-		LRK53_RS04900	0.89	-0.3
1,140,195	-		LRK53_RS04900	0.89	-0.3
1,140,195	-		LRK53_RS04900	0.89	-0.9
1,140,195	-		LRK53_RS04900	0.89	-1.4
1,140,195	-		LRK53_RS04900	0.89	-0.9
1,140,195	-		LRK53_RS04900	0.89	+1.1
1,140,195	-		LRK53_RS04900	0.89	-0.0
1,140,195	-		LRK53_RS04900	0.89	-1.9
1,140,294	-				-0.8
1,140,296	+				-0.5
1,140,296	+				-1.3
1,140,296	+				-0.3
1,140,296	+				+0.4
1,140,296	+				+0.4
1,140,296	+				-0.5
1,140,296	+				-1.5
1,140,297	-				+0.6
1,140,297	-				-1.1
1,140,297	-				-0.9
1,140,297	-				+0.2
1,140,297	-				+0.7
1,140,443	+				-2.0
1,140,444	-				-0.5
1,140,465	+				-0.8
1,140,466	-				-0.6
1,140,470	+				-1.0
1,140,470	+				-1.1
1,140,470	+				-1.6
1,140,520	+				+0.6
1,140,520	+				-0.7
1,140,520	+				-0.9
1,140,520	+				-0.5
1,140,520	+				-1.7
1,140,520	+				-0.0
1,140,520	+				-2.6
1,140,520	+				-1.8
1,140,520	+				-1.7
1,140,520	+				-1.6
1,140,520	+				-2.9
1,140,520	+				-1.3
1,140,520	+				+0.4
1,140,520	+				+0.5
1,140,520	+				-0.2
1,140,520	+				+0.8
1,140,520	+				-2.6
1,140,520	+				-0.5
1,140,520	+				-0.6
1,140,521	-				-1.2
1,140,521	-				-0.8
1,140,521	-				+1.5
1,140,521	-				-0.1
1,140,521	-				-2.1
1,140,597	+		LRK53_RS04905	0.13	-2.9
1,140,597	+		LRK53_RS04905	0.13	+0.1
1,140,597	+		LRK53_RS04905	0.13	-1.3
1,140,598	-		LRK53_RS04905	0.13	-3.1
1,140,598	-		LRK53_RS04905	0.13	-1.0
1,140,598	-		LRK53_RS04905	0.13	-2.6
1,140,598	-		LRK53_RS04905	0.13	-0.8
1,140,639	+		LRK53_RS04905	0.17	-2.0
1,140,639	+		LRK53_RS04905	0.17	-3.7
1,140,639	+		LRK53_RS04905	0.17	+0.1
1,140,639	+		LRK53_RS04905	0.17	+0.2
1,140,640	-		LRK53_RS04905	0.17	-2.0
1,140,640	-		LRK53_RS04905	0.17	-0.3
1,140,640	-		LRK53_RS04905	0.17	+1.2
1,140,640	-		LRK53_RS04905	0.17	-0.7
1,140,825	+		LRK53_RS04905	0.34	-0.3
1,140,825	+		LRK53_RS04905	0.34	-0.5
1,140,825	+		LRK53_RS04905	0.34	+0.3
1,140,825	+		LRK53_RS04905	0.34	-1.3
1,140,825	+		LRK53_RS04905	0.34	-0.3
1,140,826	-		LRK53_RS04905	0.34	-0.9
1,140,826	-		LRK53_RS04905	0.34	+0.7
1,140,826	-		LRK53_RS04905	0.34	-1.5
1,140,826	-		LRK53_RS04905	0.34	+1.2
1,140,826	-		LRK53_RS04905	0.34	-3.6
1,140,826	-		LRK53_RS04905	0.34	+0.6
1,140,980	+		LRK53_RS04905	0.49	-0.1
1,140,980	+		LRK53_RS04905	0.49	-1.3
1,140,980	+		LRK53_RS04905	0.49	-0.9
1,140,981	-		LRK53_RS04905	0.49	+1.0
1,140,981	-		LRK53_RS04905	0.49	-0.6
1,140,981	-		LRK53_RS04905	0.49	-0.0
1,140,981	-		LRK53_RS04905	0.49	+1.5
1,140,981	-		LRK53_RS04905	0.49	-0.2
1,141,251	+		LRK53_RS04905	0.74	+0.4
1,141,251	+		LRK53_RS04905	0.74	-1.7
1,141,251	+		LRK53_RS04905	0.74	-0.2
1,141,251	+		LRK53_RS04905	0.74	-0.5
1,141,251	+		LRK53_RS04905	0.74	-1.0
1,141,251	+		LRK53_RS04905	0.74	-0.6
1,141,252	-		LRK53_RS04905	0.74	-1.0
1,141,252	-		LRK53_RS04905	0.74	-2.6
1,141,252	-		LRK53_RS04905	0.74	+0.0
1,141,252	-		LRK53_RS04905	0.74	-1.2
1,141,308	+		LRK53_RS04905	0.79	-2.9
1,141,308	+		LRK53_RS04905	0.79	-0.8
1,141,308	+		LRK53_RS04905	0.79	-1.4
1,141,308	+		LRK53_RS04905	0.79	-1.9
1,141,309	-		LRK53_RS04905	0.79	-2.5
1,141,309	-		LRK53_RS04905	0.79	-1.6
1,141,309	-		LRK53_RS04905	0.79	-0.8