Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_03740 and HUW76_03745 are separated by 68 nucleotides HUW76_03745 and HUW76_03750 are separated by 9 nucleotides HUW76_03750 and HUW76_03755 are separated by 29 nucleotides
HUW76_03740: HUW76_03740 - SDR family oxidoreductase, at 746,010 to 746,939
_03740
HUW76_03745: HUW76_03745 - adenylate kinase, at 747,008 to 747,643
_03745
HUW76_03750: HUW76_03750 - type I methionyl aminopeptidase, at 747,653 to 748,417
_03750
HUW76_03755: HUW76_03755 - hypothetical protein, at 748,447 to 749,004
_03755
Position (kb) 747
748 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 746.061 kb on + strand at 746.061 kb on + strand at 746.090 kb on + strand at 746.090 kb on + strand at 746.235 kb on - strand, within HUW76_03740 at 746.302 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.307 kb on + strand, within HUW76_03740 at 746.315 kb on - strand, within HUW76_03740 at 746.322 kb on + strand, within HUW76_03740 at 746.324 kb on + strand, within HUW76_03740 at 746.324 kb on + strand, within HUW76_03740 at 746.453 kb on + strand, within HUW76_03740 at 746.453 kb on + strand, within HUW76_03740 at 746.453 kb on + strand, within HUW76_03740 at 746.453 kb on + strand, within HUW76_03740 at 746.453 kb on + strand, within HUW76_03740 at 746.453 kb on + strand, within HUW76_03740 at 746.461 kb on - strand, within HUW76_03740 at 746.461 kb on - strand, within HUW76_03740 at 746.461 kb on - strand, within HUW76_03740 at 746.461 kb on - strand, within HUW76_03740 at 746.461 kb on - strand, within HUW76_03740 at 746.461 kb on - strand, within HUW76_03740 at 746.463 kb on + strand, within HUW76_03740 at 746.471 kb on - strand, within HUW76_03740 at 746.487 kb on + strand, within HUW76_03740 at 746.487 kb on + strand, within HUW76_03740 at 746.487 kb on + strand, within HUW76_03740 at 746.487 kb on + strand, within HUW76_03740 at 746.495 kb on - strand, within HUW76_03740 at 746.495 kb on - strand, within HUW76_03740 at 746.578 kb on - strand, within HUW76_03740 at 746.594 kb on - strand, within HUW76_03740 at 746.604 kb on - strand, within HUW76_03740 at 746.604 kb on - strand, within HUW76_03740 at 746.673 kb on - strand, within HUW76_03740 at 746.673 kb on - strand, within HUW76_03740 at 746.710 kb on - strand, within HUW76_03740 at 746.856 kb on + strand at 746.856 kb on + strand at 746.910 kb on + strand at 746.923 kb on - strand at 748.413 kb on + strand at 748.564 kb on - strand, within HUW76_03755 at 748.571 kb on - strand, within HUW76_03755
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 746,061 + -2.4 746,061 + +2.8 746,090 + -3.8 746,090 + -4.8 746,235 - HUW76_03740 0.24 +2.2 746,302 + HUW76_03740 0.31 +0.8 746,307 + HUW76_03740 0.32 +1.3 746,307 + HUW76_03740 0.32 -4.3 746,307 + HUW76_03740 0.32 -3.4 746,307 + HUW76_03740 0.32 -3.9 746,307 + HUW76_03740 0.32 +0.1 746,307 + HUW76_03740 0.32 +0.0 746,307 + HUW76_03740 0.32 -0.8 746,307 + HUW76_03740 0.32 -0.3 746,315 - HUW76_03740 0.33 -2.0 746,322 + HUW76_03740 0.34 -0.8 746,324 + HUW76_03740 0.34 -3.2 746,324 + HUW76_03740 0.34 -0.2 746,453 + HUW76_03740 0.48 +0.9 746,453 + HUW76_03740 0.48 -1.7 746,453 + HUW76_03740 0.48 -0.4 746,453 + HUW76_03740 0.48 -0.3 746,453 + HUW76_03740 0.48 +4.5 746,453 + HUW76_03740 0.48 +2.4 746,461 - HUW76_03740 0.48 +1.8 746,461 - HUW76_03740 0.48 +3.0 746,461 - HUW76_03740 0.48 -4.5 746,461 - HUW76_03740 0.48 +0.6 746,461 - HUW76_03740 0.48 +2.5 746,461 - HUW76_03740 0.48 +1.2 746,463 + HUW76_03740 0.49 -0.7 746,471 - HUW76_03740 0.50 +1.7 746,487 + HUW76_03740 0.51 -0.0 746,487 + HUW76_03740 0.51 -1.2 746,487 + HUW76_03740 0.51 +0.6 746,487 + HUW76_03740 0.51 -3.1 746,495 - HUW76_03740 0.52 -3.7 746,495 - HUW76_03740 0.52 +3.9 746,578 - HUW76_03740 0.61 -1.4 746,594 - HUW76_03740 0.63 -0.6 746,604 - HUW76_03740 0.64 +2.8 746,604 - HUW76_03740 0.64 +1.4 746,673 - HUW76_03740 0.71 +3.2 746,673 - HUW76_03740 0.71 -3.3 746,710 - HUW76_03740 0.75 -2.5 746,856 + -0.5 746,856 + -0.1 746,910 + -4.5 746,923 - +1.5 748,413 + -5.0 748,564 - HUW76_03755 0.21 +3.7 748,571 - HUW76_03755 0.22 +0.6
Or see this region's nucleotide sequence