Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_03640 and HUW76_03645 are separated by 259 nucleotides HUW76_03645 and HUW76_03650 are separated by 30 nucleotides
HUW76_03640: HUW76_03640 - SurA N-terminal domain-containing protein, at 726,876 to 728,567
_03640
HUW76_03645: HUW76_03645 - DNA primase, at 728,827 to 730,635
_03645
HUW76_03650: HUW76_03650 - RNA polymerase sigma factor RpoD, at 730,666 to 731,916
_03650
Position (kb) 728
729
730
731 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 727.959 kb on + strand, within HUW76_03640 at 727.998 kb on + strand, within HUW76_03640 at 728.004 kb on + strand, within HUW76_03640 at 728.004 kb on + strand, within HUW76_03640 at 728.004 kb on + strand, within HUW76_03640 at 728.035 kb on + strand, within HUW76_03640 at 728.221 kb on + strand, within HUW76_03640 at 728.258 kb on + strand, within HUW76_03640 at 728.314 kb on + strand, within HUW76_03640 at 728.314 kb on + strand, within HUW76_03640 at 728.314 kb on + strand, within HUW76_03640 at 728.319 kb on + strand, within HUW76_03640 at 728.327 kb on + strand, within HUW76_03640 at 728.327 kb on + strand, within HUW76_03640 at 728.327 kb on + strand, within HUW76_03640 at 728.327 kb on + strand, within HUW76_03640 at 728.327 kb on + strand, within HUW76_03640 at 728.329 kb on + strand, within HUW76_03640 at 728.329 kb on + strand, within HUW76_03640 at 728.329 kb on + strand, within HUW76_03640 at 728.363 kb on + strand, within HUW76_03640 at 728.363 kb on + strand, within HUW76_03640 at 728.459 kb on + strand at 728.510 kb on + strand at 728.544 kb on + strand at 728.795 kb on + strand at 728.795 kb on + strand at 728.795 kb on + strand at 730.653 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 727,959 + HUW76_03640 0.64 +5.2 727,998 + HUW76_03640 0.66 -2.0 728,004 + HUW76_03640 0.67 -0.1 728,004 + HUW76_03640 0.67 -2.8 728,004 + HUW76_03640 0.67 +1.2 728,035 + HUW76_03640 0.68 -1.8 728,221 + HUW76_03640 0.79 -0.6 728,258 + HUW76_03640 0.82 -0.9 728,314 + HUW76_03640 0.85 +2.2 728,314 + HUW76_03640 0.85 -2.8 728,314 + HUW76_03640 0.85 +4.2 728,319 + HUW76_03640 0.85 -3.2 728,327 + HUW76_03640 0.86 +0.2 728,327 + HUW76_03640 0.86 +1.8 728,327 + HUW76_03640 0.86 -2.3 728,327 + HUW76_03640 0.86 +0.6 728,327 + HUW76_03640 0.86 -4.1 728,329 + HUW76_03640 0.86 -1.6 728,329 + HUW76_03640 0.86 +2.4 728,329 + HUW76_03640 0.86 -1.6 728,363 + HUW76_03640 0.88 +0.0 728,363 + HUW76_03640 0.88 -1.7 728,459 + -1.1 728,510 + -3.4 728,544 + +0.1 728,795 + +0.4 728,795 + -3.0 728,795 + -1.7 730,653 + +2.4
Or see this region's nucleotide sequence