Strain Fitness in Escherichia coli ECRC102 around NIAGMN_09980

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,962,090	+	yjfY	NIAGMN_09970	0.45	-0.6
1,962,090	+	yjfY	NIAGMN_09970	0.45	-1.6
1,962,091	-	yjfY	NIAGMN_09970	0.45	+0.2
1,962,091	-	yjfY	NIAGMN_09970	0.45	+0.2
1,962,101	+	yjfY	NIAGMN_09970	0.49	+0.7
1,962,101	+	yjfY	NIAGMN_09970	0.49	-1.0
1,962,136	+	yjfY	NIAGMN_09970	0.61	-0.0
1,962,136	+	yjfY	NIAGMN_09970	0.61	+2.7
1,962,136	+	yjfY	NIAGMN_09970	0.61	-1.0
1,962,136	+	yjfY	NIAGMN_09970	0.61	+0.7
1,962,168	+	yjfY	NIAGMN_09970	0.73	+0.2
1,962,168	+	yjfY	NIAGMN_09970	0.73	-2.0
1,962,168	+	yjfY	NIAGMN_09970	0.73	+1.3
1,962,169	-	yjfY	NIAGMN_09970	0.73	-0.7
1,962,169	-	yjfY	NIAGMN_09970	0.73	+0.4
1,962,169	-	yjfY	NIAGMN_09970	0.73	-1.6
1,962,169	-	yjfY	NIAGMN_09970	0.73	-2.2
1,962,171	+	yjfY	NIAGMN_09970	0.74	-2.5
1,962,171	+	yjfY	NIAGMN_09970	0.74	+0.5
1,962,172	-	yjfY	NIAGMN_09970	0.74	+0.4
1,962,172	-	yjfY	NIAGMN_09970	0.74	+0.5
1,962,172	-	yjfY	NIAGMN_09970	0.74	+0.0
1,962,178	+	yjfY	NIAGMN_09970	0.76	-0.7
1,962,178	+	yjfY	NIAGMN_09970	0.76	-0.6
1,962,212	+	yjfY	NIAGMN_09970	0.89	-2.5
1,962,212	+	yjfY	NIAGMN_09970	0.89	+2.0
1,962,212	+	yjfY	NIAGMN_09970	0.89	-1.7
1,962,213	-	yjfY	NIAGMN_09970	0.89	+0.5
1,962,213	-	yjfY	NIAGMN_09970	0.89	-0.9
1,962,213	-	yjfY	NIAGMN_09970	0.89	+0.2
1,962,213	-	yjfY	NIAGMN_09970	0.89	+0.4
1,962,213	-	yjfY	NIAGMN_09970	0.89	-1.3
1,962,234	+				-0.4
1,962,234	+				-0.7
1,962,235	-				-0.9
1,962,235	-				+1.1
1,962,235	-				+2.6
1,962,250	+				+1.3
1,962,250	+				-0.9
1,962,250	+				-0.1
1,962,251	-				-0.5
1,962,251	-				-0.1
1,962,251	-				+0.2
1,962,272	+				+1.0
1,962,272	+				+0.4
1,962,273	-				-0.0
1,962,273	-				-0.1
1,962,327	-				+1.8
1,962,335	+				+1.0
1,962,336	-				+0.6
1,962,336	-				-1.2
1,962,373	-				+0.4
1,962,373	-				-0.5
1,962,384	+				+1.4
1,962,387	+				-0.2
1,962,388	-				-1.0
1,962,406	+				-0.7
1,962,406	+				+2.5
1,962,406	+				+0.2
1,962,406	+				-1.4
1,962,407	-				+1.0
1,962,460	+	ulaF	NIAGMN_09975	0.13	-0.5
1,962,460	+	ulaF	NIAGMN_09975	0.13	-3.0
1,962,460	+	ulaF	NIAGMN_09975	0.13	-0.2
1,962,461	-	ulaF	NIAGMN_09975	0.13	-1.1
1,962,463	+	ulaF	NIAGMN_09975	0.13	-0.7
1,962,463	+	ulaF	NIAGMN_09975	0.13	-0.5
1,962,463	+	ulaF	NIAGMN_09975	0.13	-1.7
1,962,506	+	ulaF	NIAGMN_09975	0.20	+0.1
1,962,506	+	ulaF	NIAGMN_09975	0.20	+1.0
1,962,564	+	ulaF	NIAGMN_09975	0.28	+0.7
1,962,564	+	ulaF	NIAGMN_09975	0.28	-0.0
1,962,564	+	ulaF	NIAGMN_09975	0.28	-1.4
1,962,564	+	ulaF	NIAGMN_09975	0.28	+1.6
1,962,565	-	ulaF	NIAGMN_09975	0.28	-1.4
1,962,584	-	ulaF	NIAGMN_09975	0.31	+1.1
1,962,584	-	ulaF	NIAGMN_09975	0.31	-0.7
1,962,642	+	ulaF	NIAGMN_09975	0.39	-2.7
1,962,680	-	ulaF	NIAGMN_09975	0.45	-0.5
1,962,702	+	ulaF	NIAGMN_09975	0.48	-0.7
1,962,703	-	ulaF	NIAGMN_09975	0.48	-0.0
1,962,703	-	ulaF	NIAGMN_09975	0.48	-0.3
1,962,814	-	ulaF	NIAGMN_09975	0.64	+0.5
1,962,853	-	ulaF	NIAGMN_09975	0.70	-0.5
1,962,872	-	ulaF	NIAGMN_09975	0.73	+0.3
1,962,895	+	ulaF	NIAGMN_09975	0.76	-1.4
1,962,988	+	ulaF	NIAGMN_09975	0.90	-0.2
1,963,058	+				+1.0
1,963,058	+				-0.2
1,963,170	-	ulaE	NIAGMN_09980	0.13	+0.9
1,963,282	+	ulaE	NIAGMN_09980	0.26	+0.1
1,963,282	+	ulaE	NIAGMN_09980	0.26	-0.7
1,963,283	-	ulaE	NIAGMN_09980	0.26	-0.4
1,963,283	-	ulaE	NIAGMN_09980	0.26	+0.8
1,963,283	-	ulaE	NIAGMN_09980	0.26	-0.7
1,963,283	-	ulaE	NIAGMN_09980	0.26	+0.1
1,963,293	+	ulaE	NIAGMN_09980	0.28	-0.9
1,963,293	+	ulaE	NIAGMN_09980	0.28	+0.1
1,963,294	-	ulaE	NIAGMN_09980	0.28	+1.2
1,963,392	-	ulaE	NIAGMN_09980	0.39	-0.3
1,963,545	-	ulaE	NIAGMN_09980	0.57	+2.4
1,963,547	+	ulaE	NIAGMN_09980	0.57	-0.8
1,963,547	+	ulaE	NIAGMN_09980	0.57	-0.5
1,963,548	-	ulaE	NIAGMN_09980	0.57	-0.8
1,963,556	+	ulaE	NIAGMN_09980	0.58	+0.1
1,963,557	-	ulaE	NIAGMN_09980	0.58	-1.8
1,963,605	+	ulaE	NIAGMN_09980	0.64	-0.8
1,963,606	-	ulaE	NIAGMN_09980	0.64	+0.2
1,963,612	-	ulaE	NIAGMN_09980	0.65	-0.3
1,963,612	-	ulaE	NIAGMN_09980	0.65	+0.4
1,963,617	+	ulaE	NIAGMN_09980	0.65	-0.3
1,963,793	-	ulaE	NIAGMN_09980	0.86	-0.8
1,963,880	+				+3.0
1,963,881	-				-0.3
1,963,881	-				+1.7
1,963,912	-				-1.8
1,963,922	+				-2.6
1,963,992	+	ulaD	NIAGMN_09985	0.11	-1.5
1,963,995	+	ulaD	NIAGMN_09985	0.11	-0.5
1,963,995	+	ulaD	NIAGMN_09985	0.11	+1.9
1,964,007	+	ulaD	NIAGMN_09985	0.13	-0.2
1,964,185	-	ulaD	NIAGMN_09985	0.41	-0.2
1,964,314	+	ulaD	NIAGMN_09985	0.60	-1.6
1,964,315	-	ulaD	NIAGMN_09985	0.61	+1.2
1,964,349	+	ulaD	NIAGMN_09985	0.66	-0.4
1,964,349	+	ulaD	NIAGMN_09985	0.66	+0.1
1,964,349	+	ulaD	NIAGMN_09985	0.66	+1.5
1,964,349	+	ulaD	NIAGMN_09985	0.66	+0.1
1,964,530	-				+0.5
1,964,586	+				+0.3
1,964,587	-				+0.2
1,964,587	-				+0.6
1,964,587	-				-2.5
1,964,716	+	ulaC	NIAGMN_09990	0.28	-0.2
1,964,716	+	ulaC	NIAGMN_09990	0.28	-0.4
1,964,716	+	ulaC	NIAGMN_09990	0.28	+0.8
1,964,802	-	ulaC	NIAGMN_09990	0.47	-2.4
1,964,881	-	ulaC	NIAGMN_09990	0.64	-0.0
1,964,881	-	ulaC	NIAGMN_09990	0.64	+0.1
1,964,881	-	ulaC	NIAGMN_09990	0.64	-0.8