Strain Fitness in Escherichia coli ECRC102 around NIAGMN_07355

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,419,359	-		NIAGMN_07350	0.31	-1.2
1,419,407	+		NIAGMN_07350	0.36	-2.0
1,419,461	+		NIAGMN_07350	0.41	+1.4
1,420,146	-				+1.9
1,420,210	+				+0.2
1,420,210	+				+1.0
1,420,211	-				+0.7
1,420,346	+				+2.0
1,420,346	+				-2.2
1,420,347	-				-0.1
1,420,355	+				+0.8
1,420,355	+				+1.4
1,420,355	+				+0.7
1,420,356	-				-0.3
1,420,356	-				+0.5
1,420,365	-				-0.9
1,420,370	+				+0.2
1,420,370	+				-0.4
1,420,370	+				+1.4
1,420,370	+				+0.7
1,420,371	-				-0.8
1,420,395	+		NIAGMN_07355	0.10	+0.1
1,420,395	+		NIAGMN_07355	0.10	+0.1
1,420,396	-		NIAGMN_07355	0.10	-0.0
1,420,396	-		NIAGMN_07355	0.10	+0.5
1,420,398	+		NIAGMN_07355	0.10	-2.8
1,420,433	-		NIAGMN_07355	0.12	-0.7
1,420,561	-		NIAGMN_07355	0.17	-1.9
1,420,582	+		NIAGMN_07355	0.18	-0.0
1,420,748	+		NIAGMN_07355	0.25	-1.7
1,420,864	+		NIAGMN_07355	0.30	-2.0
1,420,949	-		NIAGMN_07355	0.34	-1.7
1,420,949	-		NIAGMN_07355	0.34	+2.9
1,420,963	-		NIAGMN_07355	0.35	+0.5
1,421,035	-		NIAGMN_07355	0.38	-0.8
1,421,052	+		NIAGMN_07355	0.39	-1.0
1,421,052	+		NIAGMN_07355	0.39	+0.0
1,421,053	-		NIAGMN_07355	0.39	-0.3
1,421,073	+		NIAGMN_07355	0.39	-0.1
1,421,073	+		NIAGMN_07355	0.39	+0.0
1,421,154	-		NIAGMN_07355	0.43	+0.4
1,421,154	-		NIAGMN_07355	0.43	+2.9
1,421,172	+		NIAGMN_07355	0.44	-0.5
1,421,173	-		NIAGMN_07355	0.44	-0.3
1,421,176	+		NIAGMN_07355	0.44	+1.0
1,421,176	+		NIAGMN_07355	0.44	+0.5
1,421,177	-		NIAGMN_07355	0.44	-1.5
1,421,177	-		NIAGMN_07355	0.44	+0.7
1,421,381	+		NIAGMN_07355	0.53	-1.2
1,421,384	+		NIAGMN_07355	0.53	-0.0
1,421,384	+		NIAGMN_07355	0.53	-1.7
1,421,385	-		NIAGMN_07355	0.53	+1.5
1,421,389	-		NIAGMN_07355	0.53	+1.3
1,421,389	-		NIAGMN_07355	0.53	-0.5
1,421,412	-		NIAGMN_07355	0.54	+0.1
1,421,554	+		NIAGMN_07355	0.60	-0.2
1,421,557	+		NIAGMN_07355	0.60	+0.6
1,421,558	-		NIAGMN_07355	0.60	+0.9
1,421,718	+		NIAGMN_07355	0.67	+0.5
1,421,719	-		NIAGMN_07355	0.67	+0.0
1,421,723	-		NIAGMN_07355	0.67	-0.9
1,421,816	+		NIAGMN_07355	0.71	-1.3
1,421,824	-		NIAGMN_07355	0.72	-1.2
1,421,824	-		NIAGMN_07355	0.72	+2.0
1,421,824	-		NIAGMN_07355	0.72	+1.1
1,421,826	+		NIAGMN_07355	0.72	-0.5
1,421,826	+		NIAGMN_07355	0.72	+2.1
1,421,827	-		NIAGMN_07355	0.72	+0.2
1,421,840	+		NIAGMN_07355	0.72	-1.3
1,421,894	+		NIAGMN_07355	0.75	-0.0
1,421,953	+		NIAGMN_07355	0.77	-0.3
1,421,984	+		NIAGMN_07355	0.78	-1.9
1,421,985	-		NIAGMN_07355	0.78	-0.0
1,421,985	-		NIAGMN_07355	0.78	-1.1
1,421,985	-		NIAGMN_07355	0.78	+1.4
1,421,985	-		NIAGMN_07355	0.78	-1.1
1,422,033	+		NIAGMN_07355	0.81	-0.7
1,422,034	-		NIAGMN_07355	0.81	-0.4
1,422,034	-		NIAGMN_07355	0.81	+0.9
1,422,039	+		NIAGMN_07355	0.81	+0.0
1,422,078	+		NIAGMN_07355	0.82	-0.3
1,422,079	-		NIAGMN_07355	0.83	-2.0
1,422,090	-		NIAGMN_07355	0.83	+0.1
1,422,117	+		NIAGMN_07355	0.84	-0.1
1,422,118	-		NIAGMN_07355	0.84	+0.6
1,422,203	-		NIAGMN_07355	0.88	-0.5
1,422,259	+				+0.3
1,422,259	+				+1.6
1,422,259	+				+0.8
1,422,260	-				+1.8
1,422,260	-				+0.1
1,422,260	-				+0.5
1,422,260	-				-0.3
1,422,268	+				+1.9
1,422,273	+				-0.8
1,422,274	-				+1.6
1,422,274	-				-1.6
1,422,274	-				+0.3
1,422,274	-				+0.9
1,422,277	+				+1.5
1,422,278	-				-0.7
1,422,502	-				-0.8
1,422,667	-		NIAGMN_07360	0.52	+0.8
1,422,667	-		NIAGMN_07360	0.52	-0.4
1,422,667	-		NIAGMN_07360	0.52	-0.7
1,422,667	-		NIAGMN_07360	0.52	-2.0
1,422,818	+				+2.1
1,422,818	+				-0.1
1,422,818	+				-0.1
1,422,819	-				+1.4
1,422,819	-				+0.2
1,422,819	-				+0.3
1,422,819	-				-1.4
1,422,819	-				-0.3
1,422,819	-				-0.0
1,422,819	-				+0.0
1,422,819	-				-0.3
1,422,897	-		NIAGMN_07365	0.33	+0.1
1,422,897	-		NIAGMN_07365	0.33	-0.2
1,422,973	+		NIAGMN_07365	0.68	+0.7
1,422,973	+		NIAGMN_07365	0.68	-2.0
1,422,974	-		NIAGMN_07365	0.68	-0.1
1,422,977	+		NIAGMN_07365	0.69	-0.9
1,422,977	+		NIAGMN_07365	0.69	+1.0
1,422,977	+		NIAGMN_07365	0.69	-0.1
1,422,978	-		NIAGMN_07365	0.70	-1.3
1,422,978	-		NIAGMN_07365	0.70	-1.0
1,422,978	-		NIAGMN_07365	0.70	+0.1
1,422,978	-		NIAGMN_07365	0.70	-1.0
1,422,994	+		NIAGMN_07365	0.77	+0.5
1,422,995	-		NIAGMN_07365	0.77	-1.0
1,423,009	+		NIAGMN_07365	0.84	-0.6
1,423,009	+		NIAGMN_07365	0.84	+1.0
1,423,023	-				-0.5
1,423,044	+				-0.5
1,423,045	-				-0.9
1,423,045	-				+0.6
1,423,086	+				-0.2
1,423,086	+				-1.5
1,423,086	+				+1.3
1,423,087	-				-2.7
1,423,087	-				-2.0
1,423,087	-				+1.7
1,423,087	-				+0.2
1,423,090	+				-0.6
1,423,091	-				+0.3
1,423,091	-				-1.9
1,423,091	-				-0.3
1,423,101	+		NIAGMN_07370	0.11	+0.7
1,423,102	-		NIAGMN_07370	0.11	-0.8
1,423,148	+		NIAGMN_07370	0.19	-0.3
1,423,148	+		NIAGMN_07370	0.19	+2.4
1,423,148	+		NIAGMN_07370	0.19	+0.3
1,423,201	+		NIAGMN_07370	0.29	+1.3
1,423,201	+		NIAGMN_07370	0.29	-1.3
1,423,201	+		NIAGMN_07370	0.29	-2.5
1,423,202	-		NIAGMN_07370	0.29	-1.2
1,423,202	-		NIAGMN_07370	0.29	+0.1
1,423,230	-		NIAGMN_07370	0.34	-2.6
1,423,230	-		NIAGMN_07370	0.34	+1.2
1,423,252	-		NIAGMN_07370	0.38	-2.0
1,423,252	-		NIAGMN_07370	0.38	-2.6
1,423,374	+		NIAGMN_07370	0.60	+0.3
1,423,374	+		NIAGMN_07370	0.60	-0.0
1,423,374	+		NIAGMN_07370	0.60	-0.0
1,423,375	-		NIAGMN_07370	0.60	+2.6
1,423,375	-		NIAGMN_07370	0.60	+0.2
1,423,395	+		NIAGMN_07370	0.63	-0.5
1,423,395	+		NIAGMN_07370	0.63	+1.1
1,423,395	+		NIAGMN_07370	0.63	+0.6
1,423,396	-		NIAGMN_07370	0.64	-1.0
1,423,396	-		NIAGMN_07370	0.64	-0.0
1,423,396	-		NIAGMN_07370	0.64	+0.3
1,423,396	-		NIAGMN_07370	0.64	-1.2
1,423,396	-		NIAGMN_07370	0.64	-0.3
1,423,396	-		NIAGMN_07370	0.64	-1.9
1,423,479	+		NIAGMN_07370	0.78	-0.8
1,423,480	-		NIAGMN_07370	0.79	-0.4
1,423,480	-		NIAGMN_07370	0.79	-1.3
1,423,480	-		NIAGMN_07370	0.79	+0.8
1,423,480	-		NIAGMN_07370	0.79	+0.4