Strain Fitness in Escherichia coli ECRC101 around MCAODC_27525

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,248,667	+				-1.6
2,248,668	-				-0.3
2,248,702	+				+0.9
2,248,702	+				-1.0
2,248,702	+				+0.9
2,248,702	+				-2.0
2,248,702	+				+0.1
2,248,702	+				-0.7
2,248,703	-				-0.8
2,248,809	-				+2.2
2,248,835	+				-0.4
2,248,850	-				+0.2
2,248,866	+				-1.1
2,248,867	-				-0.6
2,248,870	+				-0.1
2,248,870	+				+2.3
2,248,870	+				+0.5
2,248,935	+				-0.9
2,248,935	+				-0.7
2,248,936	-				+1.6
2,248,943	+	queC	MCAODC_27520	0.10	+0.1
2,248,943	+	queC	MCAODC_27520	0.10	-2.7
2,248,943	+	queC	MCAODC_27520	0.10	+0.3
2,248,944	-	queC	MCAODC_27520	0.10	+1.2
2,249,045	-	queC	MCAODC_27520	0.25	+0.6
2,249,058	+	queC	MCAODC_27520	0.27	+2.1
2,249,058	+	queC	MCAODC_27520	0.27	-0.0
2,249,058	+	queC	MCAODC_27520	0.27	-0.0
2,249,059	-	queC	MCAODC_27520	0.27	+0.2
2,249,059	-	queC	MCAODC_27520	0.27	+1.3
2,249,059	-	queC	MCAODC_27520	0.27	-2.2
2,249,059	-	queC	MCAODC_27520	0.27	+0.1
2,249,120	+	queC	MCAODC_27520	0.36	-0.9
2,249,121	-	queC	MCAODC_27520	0.36	-0.8
2,249,150	-	queC	MCAODC_27520	0.40	-2.7
2,249,196	+	queC	MCAODC_27520	0.47	-1.9
2,249,196	+	queC	MCAODC_27520	0.47	-0.6
2,249,197	-	queC	MCAODC_27520	0.47	+0.8
2,249,197	-	queC	MCAODC_27520	0.47	-0.2
2,249,197	-	queC	MCAODC_27520	0.47	-1.5
2,249,198	+	queC	MCAODC_27520	0.47	+0.7
2,249,198	+	queC	MCAODC_27520	0.47	-2.6
2,249,198	+	queC	MCAODC_27520	0.47	+0.1
2,249,198	+	queC	MCAODC_27520	0.47	-1.6
2,249,198	+	queC	MCAODC_27520	0.47	-0.1
2,249,199	-	queC	MCAODC_27520	0.47	+0.1
2,249,199	-	queC	MCAODC_27520	0.47	-1.0
2,249,199	-	queC	MCAODC_27520	0.47	-0.1
2,249,199	-	queC	MCAODC_27520	0.47	+0.8
2,249,199	-	queC	MCAODC_27520	0.47	+0.6
2,249,204	+	queC	MCAODC_27520	0.48	+0.9
2,249,226	+	queC	MCAODC_27520	0.51	+0.0
2,249,230	+	queC	MCAODC_27520	0.52	-0.2
2,249,293	-	queC	MCAODC_27520	0.61	-0.5
2,249,293	-	queC	MCAODC_27520	0.61	-0.6
2,249,295	+	queC	MCAODC_27520	0.61	-2.2
2,249,296	-	queC	MCAODC_27520	0.61	+0.3
2,249,296	-	queC	MCAODC_27520	0.61	-0.3
2,249,329	+	queC	MCAODC_27520	0.66	-0.5
2,249,329	+	queC	MCAODC_27520	0.66	-1.6
2,249,362	+	queC	MCAODC_27520	0.71	-0.4
2,249,363	-	queC	MCAODC_27520	0.71	+1.1
2,249,390	+	queC	MCAODC_27520	0.75	+0.3
2,249,391	-	queC	MCAODC_27520	0.75	+0.2
2,249,410	-	queC	MCAODC_27520	0.77	-1.8
2,249,410	-	queC	MCAODC_27520	0.77	+0.7
2,249,435	+	queC	MCAODC_27520	0.81	-0.5
2,249,436	-	queC	MCAODC_27520	0.81	+0.6
2,249,438	-	queC	MCAODC_27520	0.81	+0.7
2,249,479	+	queC	MCAODC_27520	0.87	-1.6
2,249,480	-	queC	MCAODC_27520	0.88	+0.9
2,249,484	+	queC	MCAODC_27520	0.88	-0.6
2,249,507	+				-0.3
2,249,565	-				-0.0
2,249,569	-				+1.1
2,249,623	+				+0.0
2,249,624	-				+0.8
2,249,666	+	fadM	MCAODC_27525	0.12	+1.0
2,249,666	+	fadM	MCAODC_27525	0.12	+0.9
2,249,667	-	fadM	MCAODC_27525	0.12	-0.2
2,249,704	+	fadM	MCAODC_27525	0.22	+0.1
2,249,705	-	fadM	MCAODC_27525	0.22	+0.0
2,249,705	-	fadM	MCAODC_27525	0.22	+1.9
2,249,705	-	fadM	MCAODC_27525	0.22	+0.4
2,249,707	+	fadM	MCAODC_27525	0.22	+0.9
2,249,708	-	fadM	MCAODC_27525	0.23	+0.6
2,249,747	-	fadM	MCAODC_27525	0.32	-0.5
2,249,747	-	fadM	MCAODC_27525	0.32	-1.4
2,249,747	-	fadM	MCAODC_27525	0.32	-1.9
2,249,759	+	fadM	MCAODC_27525	0.35	-2.0
2,249,760	-	fadM	MCAODC_27525	0.36	-0.2
2,249,760	-	fadM	MCAODC_27525	0.36	-1.7
2,249,773	+	fadM	MCAODC_27525	0.39	+0.5
2,249,781	-	fadM	MCAODC_27525	0.41	+0.1
2,249,790	-	fadM	MCAODC_27525	0.43	+0.6
2,249,819	+	fadM	MCAODC_27525	0.50	-3.0
2,249,819	+	fadM	MCAODC_27525	0.50	+0.4
2,249,820	-	fadM	MCAODC_27525	0.51	-3.7
2,249,820	-	fadM	MCAODC_27525	0.51	+0.3
2,249,838	+	fadM	MCAODC_27525	0.55	+1.6
2,249,842	+	fadM	MCAODC_27525	0.56	+0.5
2,249,842	+	fadM	MCAODC_27525	0.56	+0.8
2,249,842	+	fadM	MCAODC_27525	0.56	+0.1
2,249,842	+	fadM	MCAODC_27525	0.56	+1.0
2,249,843	-	fadM	MCAODC_27525	0.56	-0.4
2,249,846	-	fadM	MCAODC_27525	0.57	+0.3
2,249,846	-	fadM	MCAODC_27525	0.57	-1.1
2,249,846	-	fadM	MCAODC_27525	0.57	-1.3
2,249,876	-	fadM	MCAODC_27525	0.65	-1.2
2,249,963	+	fadM	MCAODC_27525	0.86	-3.3
2,249,963	+	fadM	MCAODC_27525	0.86	+0.9
2,250,024	+				-0.2
2,250,030	+				-0.1
2,250,030	+				-0.4
2,250,030	+				+0.2
2,250,031	-				-1.6
2,250,031	-				-0.1
2,250,031	-				-1.4
2,250,031	-				+3.5
2,250,031	-				+1.1
2,250,031	-				+0.1
2,250,054	-				+0.2
2,250,055	+				+0.5
2,250,055	+				-0.2
2,250,055	+				-1.6
2,250,055	+				-0.0
2,250,056	-				+0.5
2,250,056	-				-1.6
2,250,056	-				-0.7
2,250,059	+				-0.3
2,250,059	+				+0.2
2,250,060	-				+1.5
2,250,060	-				+2.1
2,250,060	-				+1.1
2,250,119	+				+0.5
2,250,123	+				+0.5
2,250,132	-				-1.2
2,250,145	+				+0.2
2,250,146	-				+0.4
2,250,146	-				+0.2
2,250,185	+	ybaV	MCAODC_27530	0.17	+0.9
2,250,185	+	ybaV	MCAODC_27530	0.17	+0.9
2,250,226	-	ybaV	MCAODC_27530	0.28	-1.7
2,250,298	+	ybaV	MCAODC_27530	0.47	-0.2
2,250,298	+	ybaV	MCAODC_27530	0.47	-0.2
2,250,299	-	ybaV	MCAODC_27530	0.48	-0.3
2,250,302	-	ybaV	MCAODC_27530	0.48	+0.8
2,250,355	+	ybaV	MCAODC_27530	0.63	-0.6
2,250,356	-	ybaV	MCAODC_27530	0.63	+0.2
2,250,389	+	ybaV	MCAODC_27530	0.72	+0.9
2,250,479	-				+0.5
2,250,479	-				+2.0
2,250,549	+				-0.2
2,250,605	+				-3.2
2,250,645	+				-2.4
2,250,646	-				+2.1
2,250,821	-				+0.7
2,250,821	-				-1.5
2,250,847	-	ppiD	MCAODC_27535	0.11	-0.5
2,250,962	-	ppiD	MCAODC_27535	0.17	+0.7
2,250,962	-	ppiD	MCAODC_27535	0.17	-0.2