Strain Fitness in Escherichia coli ECRC101 around MCAODC_10085

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,005,339	-				+0.9
2,005,339	-				-1.4
2,005,364	-				+0.1
2,005,367	-				+0.6
2,005,370	-				+0.3
2,005,370	-				-0.2
2,005,370	-				+0.4
2,005,370	-				+0.6
2,005,374	-				+0.0
2,005,374	-				+0.1
2,005,374	-				-1.3
2,005,380	-				-0.1
2,005,388	+				+2.3
2,005,388	+				+0.8
2,005,388	+				-1.0
2,005,389	-				+0.3
2,005,502	-				+0.8
2,005,507	+				-0.5
2,005,507	+				-0.1
2,005,507	+				+0.3
2,005,508	-				-0.9
2,005,537	+				-2.5
2,005,537	+				+0.4
2,005,537	+				+0.6
2,005,538	-				-1.3
2,005,538	-				+0.2
2,005,538	-				-0.6
2,005,538	-				-0.1
2,005,538	-				+0.6
2,005,538	-				+0.9
2,005,671	+	sdhE	MCAODC_10075	0.35	-0.6
2,005,707	-	sdhE	MCAODC_10075	0.48	+0.8
2,005,908	+	ygfX	MCAODC_10080	0.20	-0.2
2,005,914	-	ygfX	MCAODC_10080	0.22	-0.2
2,005,936	+	ygfX	MCAODC_10080	0.27	+0.5
2,005,958	+	ygfX	MCAODC_10080	0.33	+1.2
2,005,959	-	ygfX	MCAODC_10080	0.33	+0.1
2,005,959	-	ygfX	MCAODC_10080	0.33	-0.0
2,006,001	+	ygfX	MCAODC_10080	0.43	-2.0
2,006,002	-	ygfX	MCAODC_10080	0.43	+1.5
2,006,004	+	ygfX	MCAODC_10080	0.44	+2.1
2,006,004	+	ygfX	MCAODC_10080	0.44	-0.2
2,006,004	+	ygfX	MCAODC_10080	0.44	-2.2
2,006,005	-	ygfX	MCAODC_10080	0.44	-0.6
2,006,005	-	ygfX	MCAODC_10080	0.44	+1.0
2,006,120	+	ygfX	MCAODC_10080	0.72	+0.1
2,006,121	-	ygfX	MCAODC_10080	0.73	-1.1
2,006,150	+	ygfX	MCAODC_10080	0.80	-0.3
2,006,151	-	ygfX	MCAODC_10080	0.80	+0.0
2,006,151	-	ygfX	MCAODC_10080	0.80	+0.6
2,006,230	+				+0.1
2,006,230	+				-0.7
2,006,249	+				+0.0
2,006,249	+				-0.2
2,006,249	+				+0.4
2,006,249	+				+1.0
2,006,249	+				-0.6
2,006,250	-				+1.3
2,006,271	-				-4.6
2,006,280	-				-0.4
2,006,346	-	fldB	MCAODC_10085	0.14	-1.8
2,006,424	-	fldB	MCAODC_10085	0.29	+3.1
2,006,657	+	fldB	MCAODC_10085	0.74	-0.7
2,006,657	+	fldB	MCAODC_10085	0.74	-1.6
2,006,694	+	fldB	MCAODC_10085	0.81	-0.1
2,006,695	-	fldB	MCAODC_10085	0.81	+0.9
2,006,698	+	fldB	MCAODC_10085	0.82	-1.0
2,006,699	-	fldB	MCAODC_10085	0.82	-1.3
2,006,699	-	fldB	MCAODC_10085	0.82	+0.4
2,006,756	+				+2.6
2,006,798	+				-0.4
2,006,798	+				-1.0
2,006,799	-				-0.5
2,006,799	-				+2.4
2,006,799	-				-0.1
2,006,799	-				-1.0
2,006,836	+				-0.7
2,006,837	-				+0.5
2,006,865	-				+0.1
2,006,865	-				+1.2
2,006,871	+				+0.1
2,006,871	+				-0.7
2,006,872	-				-0.9
2,006,872	-				-2.0
2,006,872	-				-1.9
2,006,872	-				-4.3
2,006,893	+				-0.6
2,007,269	+	xerD	MCAODC_10090	0.41	-1.6
2,007,310	-	xerD	MCAODC_10090	0.45	-1.8
2,007,315	+	xerD	MCAODC_10090	0.46	-0.9
2,007,592	+	xerD	MCAODC_10090	0.77	-0.7