Strain Fitness in Escherichia coli ECRC101 around MCAODC_05275

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,063,659	-	ravA	MCAODC_05270	0.36	+0.6
1,063,659	-	ravA	MCAODC_05270	0.36	+0.1
1,063,659	-	ravA	MCAODC_05270	0.36	+1.0
1,063,665	-	ravA	MCAODC_05270	0.37	-0.3
1,063,689	-	ravA	MCAODC_05270	0.38	-2.1
1,063,689	-	ravA	MCAODC_05270	0.38	+0.6
1,063,707	-	ravA	MCAODC_05270	0.39	+0.7
1,063,719	+	ravA	MCAODC_05270	0.40	+0.7
1,063,737	+	ravA	MCAODC_05270	0.42	-0.5
1,063,738	-	ravA	MCAODC_05270	0.42	-0.5
1,063,913	+	ravA	MCAODC_05270	0.54	-1.5
1,063,914	-	ravA	MCAODC_05270	0.54	+1.9
1,063,919	-	ravA	MCAODC_05270	0.54	+0.5
1,063,948	+	ravA	MCAODC_05270	0.56	-0.9
1,063,949	-	ravA	MCAODC_05270	0.56	+0.2
1,063,968	+	ravA	MCAODC_05270	0.57	-0.3
1,063,978	-	ravA	MCAODC_05270	0.58	-1.5
1,064,011	-	ravA	MCAODC_05270	0.60	-0.8
1,064,011	-	ravA	MCAODC_05270	0.60	+1.2
1,064,066	+	ravA	MCAODC_05270	0.64	+0.0
1,064,073	+	ravA	MCAODC_05270	0.65	+1.5
1,064,073	+	ravA	MCAODC_05270	0.65	-0.2
1,064,139	-	ravA	MCAODC_05270	0.69	+0.4
1,064,208	+	ravA	MCAODC_05270	0.74	-2.6
1,064,208	+	ravA	MCAODC_05270	0.74	-0.1
1,064,208	+	ravA	MCAODC_05270	0.74	+0.2
1,064,209	-	ravA	MCAODC_05270	0.74	-0.0
1,064,209	-	ravA	MCAODC_05270	0.74	+0.6
1,064,209	-	ravA	MCAODC_05270	0.74	-1.5
1,064,210	+	ravA	MCAODC_05270	0.74	-0.6
1,064,210	+	ravA	MCAODC_05270	0.74	-0.5
1,064,211	-	ravA	MCAODC_05270	0.74	+0.3
1,064,211	-	ravA	MCAODC_05270	0.74	+1.4
1,064,211	-	ravA	MCAODC_05270	0.74	-0.0
1,064,211	-	ravA	MCAODC_05270	0.74	-0.6
1,064,213	+	ravA	MCAODC_05270	0.74	+1.4
1,064,213	+	ravA	MCAODC_05270	0.74	-0.2
1,064,213	+	ravA	MCAODC_05270	0.74	-0.5
1,064,213	+	ravA	MCAODC_05270	0.74	-1.1
1,064,214	-	ravA	MCAODC_05270	0.74	+0.6
1,064,214	-	ravA	MCAODC_05270	0.74	+0.2
1,064,219	-	ravA	MCAODC_05270	0.75	-0.3
1,064,219	-	ravA	MCAODC_05270	0.75	-0.3
1,064,399	+	ravA	MCAODC_05270	0.87	+0.3
1,064,455	+				-0.5
1,064,528	+				+1.7
1,064,528	+				-0.7
1,064,529	-				-0.7
1,064,529	-				-2.6
1,064,583	+				-0.1
1,064,589	-				+0.5
1,064,589	-				-0.5
1,064,591	+				+0.6
1,064,591	+				+0.0
1,064,632	+				+1.0
1,064,930	+	asnA	MCAODC_05275	0.34	+0.3
1,064,930	+	asnA	MCAODC_05275	0.34	+1.3
1,064,931	-	asnA	MCAODC_05275	0.34	+0.1
1,064,931	-	asnA	MCAODC_05275	0.34	+0.4
1,064,995	+	asnA	MCAODC_05275	0.41	+2.1
1,065,064	+	asnA	MCAODC_05275	0.48	+1.2
1,065,064	+	asnA	MCAODC_05275	0.48	-0.8
1,065,065	-	asnA	MCAODC_05275	0.48	-0.1
1,065,079	+	asnA	MCAODC_05275	0.49	-0.5
1,065,080	-	asnA	MCAODC_05275	0.49	+0.7
1,065,150	+	asnA	MCAODC_05275	0.56	+0.2
1,065,150	+	asnA	MCAODC_05275	0.56	+1.8
1,065,150	+	asnA	MCAODC_05275	0.56	+0.8
1,065,151	-	asnA	MCAODC_05275	0.56	+0.7
1,065,173	-	asnA	MCAODC_05275	0.59	+2.3
1,065,173	-	asnA	MCAODC_05275	0.59	+0.6
1,065,218	-	asnA	MCAODC_05275	0.63	-0.9
1,065,245	+	asnA	MCAODC_05275	0.66	-2.4
1,065,245	+	asnA	MCAODC_05275	0.66	+0.8
1,065,245	+	asnA	MCAODC_05275	0.66	-0.6
1,065,246	-	asnA	MCAODC_05275	0.66	-0.2
1,065,306	-	asnA	MCAODC_05275	0.72	-0.3
1,065,412	+	asnA	MCAODC_05275	0.83	+0.4
1,065,413	-	asnA	MCAODC_05275	0.83	-0.3
1,065,472	-	asnA	MCAODC_05275	0.89	-0.1
1,065,546	+				+0.1
1,065,547	-				+0.2
1,065,547	-				-1.7
1,065,569	+				-1.2
1,065,569	+				-0.6
1,065,569	+				+0.5
1,065,569	+				-0.8
1,065,569	+				-0.3
1,065,569	+				+0.8
1,065,570	-				+0.9
1,065,570	-				+0.3
1,065,609	+				+1.0
1,065,610	-				+1.5
1,065,696	-				+0.7
1,065,733	+				-0.8
1,065,784	-	asnC	MCAODC_05280	0.11	+1.0
1,065,901	+	asnC	MCAODC_05280	0.36	-1.3
1,065,901	+	asnC	MCAODC_05280	0.36	+0.4
1,065,901	+	asnC	MCAODC_05280	0.36	+0.3
1,065,902	-	asnC	MCAODC_05280	0.37	-0.6
1,065,929	+	asnC	MCAODC_05280	0.42	+1.9
1,065,936	+	asnC	MCAODC_05280	0.44	+0.6
1,065,936	+	asnC	MCAODC_05280	0.44	-0.8
1,065,936	+	asnC	MCAODC_05280	0.44	+0.3
1,065,937	-	asnC	MCAODC_05280	0.44	-0.1
1,065,955	+	asnC	MCAODC_05280	0.48	-0.2
1,065,955	+	asnC	MCAODC_05280	0.48	+0.7
1,065,955	+	asnC	MCAODC_05280	0.48	+1.0
1,065,955	+	asnC	MCAODC_05280	0.48	-3.4
1,065,956	-	asnC	MCAODC_05280	0.48	-1.8
1,065,957	+	asnC	MCAODC_05280	0.49	-1.4
1,065,957	+	asnC	MCAODC_05280	0.49	-0.1
1,065,957	+	asnC	MCAODC_05280	0.49	+0.4
1,065,957	+	asnC	MCAODC_05280	0.49	+0.3
1,065,958	-	asnC	MCAODC_05280	0.49	+0.1
1,065,960	+	asnC	MCAODC_05280	0.49	-0.1
1,065,960	+	asnC	MCAODC_05280	0.49	+1.1
1,065,960	+	asnC	MCAODC_05280	0.49	+0.3
1,065,961	-	asnC	MCAODC_05280	0.49	-0.7
1,065,977	+	asnC	MCAODC_05280	0.53	+0.9
1,066,028	+	asnC	MCAODC_05280	0.64	-0.2
1,066,031	+	asnC	MCAODC_05280	0.65	-2.6
1,066,031	+	asnC	MCAODC_05280	0.65	+0.1
1,066,032	-	asnC	MCAODC_05280	0.65	+0.8
1,066,032	-	asnC	MCAODC_05280	0.65	+0.2
1,066,032	-	asnC	MCAODC_05280	0.65	-0.8
1,066,046	+	asnC	MCAODC_05280	0.68	+0.7
1,066,047	-	asnC	MCAODC_05280	0.68	-0.2
1,066,047	-	asnC	MCAODC_05280	0.68	+0.2
1,066,060	-	asnC	MCAODC_05280	0.71	-0.1
1,066,060	-	asnC	MCAODC_05280	0.71	+1.5
1,066,098	+	asnC	MCAODC_05280	0.79	-0.2
1,066,098	+	asnC	MCAODC_05280	0.79	-0.6
1,066,098	+	asnC	MCAODC_05280	0.79	+0.2
1,066,098	+	asnC	MCAODC_05280	0.79	+0.2
1,066,098	+	asnC	MCAODC_05280	0.79	+0.2
1,066,099	-	asnC	MCAODC_05280	0.80	+0.1
1,066,099	-	asnC	MCAODC_05280	0.80	+1.6
1,066,102	+	asnC	MCAODC_05280	0.80	-2.5
1,066,103	-	asnC	MCAODC_05280	0.80	+0.1
1,066,103	-	asnC	MCAODC_05280	0.80	-1.9
1,066,204	-				+0.0
1,066,211	+				+0.4
1,066,226	-				+1.2
1,066,248	+				-1.1
1,066,248	+				+1.0
1,066,248	+				+0.2
1,066,248	+				+1.1
1,066,248	+				+1.3
1,066,249	-				+0.1
1,066,249	-				-0.1
1,066,249	-				-0.4
1,066,249	-				+0.3
1,066,249	-				-0.4
1,066,253	+				+2.3
1,066,264	+				-0.8
1,066,264	+				-0.9
1,066,265	-				+2.3
1,066,292	+				+1.8
1,066,292	+				+1.7
1,066,292	+				-1.2
1,066,292	+				+0.7
1,066,292	+				-0.1
1,066,292	+				+1.3
1,066,292	+				+0.2
1,066,293	-				+0.3
1,066,293	-				-0.9
1,066,293	-				-0.8
1,066,293	-				+2.3
1,066,330	+	mioC	MCAODC_05285	0.11	-1.1
1,066,330	+	mioC	MCAODC_05285	0.11	-0.8
1,066,330	+	mioC	MCAODC_05285	0.11	-0.9
1,066,331	-	mioC	MCAODC_05285	0.11	+1.5
1,066,331	-	mioC	MCAODC_05285	0.11	-0.1
1,066,331	-	mioC	MCAODC_05285	0.11	+0.9
1,066,331	-	mioC	MCAODC_05285	0.11	-0.3
1,066,331	-	mioC	MCAODC_05285	0.11	-0.4
1,066,412	+	mioC	MCAODC_05285	0.29	+1.1
1,066,412	+	mioC	MCAODC_05285	0.29	-0.1
1,066,412	+	mioC	MCAODC_05285	0.29	-0.3
1,066,413	-	mioC	MCAODC_05285	0.30	-0.7
1,066,413	-	mioC	MCAODC_05285	0.30	-0.2
1,066,489	+	mioC	MCAODC_05285	0.47	-0.7
1,066,489	+	mioC	MCAODC_05285	0.47	+1.2
1,066,490	-	mioC	MCAODC_05285	0.47	+1.3
1,066,490	-	mioC	MCAODC_05285	0.47	-2.5
1,066,554	+	mioC	MCAODC_05285	0.61	+0.6
1,066,554	+	mioC	MCAODC_05285	0.61	-0.1
1,066,554	+	mioC	MCAODC_05285	0.61	+0.5
1,066,554	+	mioC	MCAODC_05285	0.61	+0.8